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Differential proteomics analysis of the embryo in sorghum-sudangrass hybrid and its parents
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Science & Technology Review | 2018, 36(14) : 88 - 98
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Science & Technology Review | 2018, 36(14): 88-98
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Differential proteomics analysis of the embryo in sorghum-sudangrass hybrid and its parents
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XUE Chunlei1, LU Xiaoping1, HAN Pingan2, ZHANG Kunming1, ZHANG Ruixia3, DONG Jing1
Affiliations
    1. College of Agronomy, Inner Mongolia Agricultural University, Hohhot 010019, China;
    2. Biological Research Center, Inner Mongolia Academy of Agriculture and Animal Husbandry Science, Hohhot 010020, China;
    3. Hohhot Seed Management Station, Hohhot 010019, China
Published: 2018-07-28 doi: 10.3981/j.issn.1000-7857.2018.14.012
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Sorghum-sudangrass hybrids are annual gramineous forage crops with intergrated excellent parental traits. Their heterosis is particularly prominent, but the molecular mechanism of the heterosis is not yet very clear. To reveal the molecular mechanism, the mature embryos of sorghum-sudangrass hybrids and their parents are analyzed by the Label free mass spectrometry and the bioinformatics methods based on proteomics in this study. 124 differentially expressed proteins are identified, among which 48 are additive accumulation proteins, accounting for 38.71% of the total proteins. 19 and 29 of them are up-regulated proteins and down-regulated proteins, respectively. 76 of them are non-additive accumulation proteins, accounting for 61.29% of the total proteins. 29 proteins are of the above-high-parent expression, with the greatest proportion among the non-additive accumulation expression patterns. Followed by the high-parent expression patterns(18 proteins), the low-parent expression patterns (14 proteins), the below-low-parent expression patterns(10 proteins). Besides, there are 5 proteins which do not belong to the above four kinds of protein expression patterns. Therefore, non-additive proteins play especially dominant roles in the heterosis of the mature embryo of sorghum-sudangrass hybrids. Additive and non-additive accumulation proteins cover multiple functional groups, which involve the stress response, the carbohydrate metabolism, the transcriptional regulation, the development regulation, the signal transduction, the protein metabolism and others.
Sorghum-sudangrass hybrid  /  embryo  /  proteomics  /  label free  /  mass spectrometry
薛春雷, 逯晓萍, 韩平安, 张坤明, 张瑞霞, 董婧. 高丹草及其亲本种子胚差异蛋白质组学分析. 科技导报, 2018 , 36 (14) : 88 -98 . DOI: 10.3981/j.issn.1000-7857.2018.14.012
XUE Chunlei, LU Xiaoping, HAN Pingan, ZHANG Kunming, ZHANG Ruixia, DONG Jing. Differential proteomics analysis of the embryo in sorghum-sudangrass hybrid and its parents[J]. Science & Technology Review, 2018 , 36 (14) : 88 -98 . DOI: 10.3981/j.issn.1000-7857.2018.14.012
Year 2018 volume 36 Issue 14
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doi: 10.3981/j.issn.1000-7857.2018.14.012
  • Receive Date:2017-11-01
  • Online Date:2018-07-27
  • Published:2018-07-28
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  • Received:2017-11-01
  • Revised:2018-04-26
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表12种不同金属材料的力学参数
科
Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)
属
Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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