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"Next generation biomanufacturing technology" based on metabolic engineering and synthetic biology of extremophiles
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Jiangnan CHEN1, Guoqiang CHEN1, 2, 3, 4, 5, *
Science & Technology Review | 2025, 43(23) : 70 - 82
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Science & Technology Review | 2025, 43(23): 70-82
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"Next generation biomanufacturing technology" based on metabolic engineering and synthetic biology of extremophiles
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Jiangnan CHEN1, Guoqiang CHEN1, 2, 3, 4, 5, *
Affiliations
  • 1School of Life Sciences, Tsinghua University, Beijing 100084, China
  • 2Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
  • 3Center for Synthetic and Systems Biology, Tsinghua University, Beijing 100084, China
  • 4Tsinghua−Peking Center for Life Sciences, Tsinghua University, Beijing 100084, China
  • 5State Key Laboratory of Green Biomanufactoring, Tsinghua University, Beijing 100084, China
Published: 2025-12-13 doi: 10.3981/j.issn.1000-7857.2025.09.00032
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To achieve the "Dual Carbon" goals, industrial biomanufacturing must transits toward green sustainability. Bottlenecks such as high−water consumption, sterilization energy demands, and discontinuous processes have driven the development of next generation biomanufacturing centered on extremophiles (e.g., Halomonas spp.). Their non−sterile open fermentation significantly reduces energy consumption and operational costs. This review highlights Halomonas bluephagenesis as a chassis strain: Through synthetic biology approaches—including the development of specific genetic regulatory tools, optimization of gene editing, accelerated evolution methods, metabolic pathway and cell morphology engineering, Halomonas bluephagenesis has been successfully constructed into an efficient platform. It can utilize diverse and low−cost waste carbon sources (e.g., starch, cellulose, acetate, food wastes) to synthesize biodegradable bioplastics (PHA), high−value small molecules, amino acids, and proteins. Future efforts should focus on developing more versatile synthetic biology toolkits, enhancing the robustness of large−scale fermentation processes, and improving the integration between carbon source pretreatment and process engineering. In conclusion, next generation Halomonas−based biomanufacturing, leveraging the combined advantages of extreme contamination−resistant chassis+synthetic biology tools+process simplification, effectively overcomes inherent limitations of traditional methods. Its significant economic efficiency and environmental compatibility provide crucial support for building a green, sustainable biomanufacturing system and realizing the dual carbon goals.

extremophiles  /  Halomonas  /  next generation biomanufacturing technology  /  synthetic biology  /  carbon neutrality  /  biomanufacuring  /  PHA
Jiangnan CHEN, Guoqiang CHEN. "Next generation biomanufacturing technology" based on metabolic engineering and synthetic biology of extremophiles[J]. Science & Technology Review, 2025 , 43 (23) : 70 -82 . DOI: 10.3981/j.issn.1000-7857.2025.09.00032
Year 2025 volume 43 Issue 23
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doi: 10.3981/j.issn.1000-7857.2025.09.00032
  • Receive Date:2025-09-23
  • Online Date:2025-12-26
  • Published:2025-12-13
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  • Received:2025-09-23
  • Revised:2025-11-19
  • Accepted:2025-11-19
Affiliations
    1School of Life Sciences, Tsinghua University, Beijing 100084, China
    2Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
    3Center for Synthetic and Systems Biology, Tsinghua University, Beijing 100084, China
    4Tsinghua−Peking Center for Life Sciences, Tsinghua University, Beijing 100084, China
    5State Key Laboratory of Green Biomanufactoring, Tsinghua University, Beijing 100084, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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