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Identification of Panax notoginseng in traditional Chinese patent medicines based on analysis of whole-GEnome
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Qian LOU1, Zhi-jie SHI1, Yu-tong GAN1, Tian-yi XIN1, Wen-jie XU1, *, Jing-yuan SONG1, 2, *
Acta Pharmaceutica Sinica | 2026, 61(6) : 2320 - 2328
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Acta Pharmaceutica Sinica | 2026, 61(6): 2320-2328
• Original Articles •
Identification of Panax notoginseng in traditional Chinese patent medicines based on analysis of whole-GEnome
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Qian LOU1, Zhi-jie SHI1, Yu-tong GAN1, Tian-yi XIN1, Wen-jie XU1, *, Jing-yuan SONG1, 2, *
Affiliations
  • 1Key Lab of Chinese Medicine Resources Conservation, State Administration of Traditional Chinese Medicine of the People's Republic of China, State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
  • 2Engineering Research Center of Chinese Medicine Resource, Ministry of Education, Beijing 100193, China
Published: 2026-06-12 doi: 10.16438/j.0513-4870.2025-1542
Outline
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Accurate authentication of components in traditional Chinese patent medicines (TCPMs) is fundamental to ensuring the safety and accuracy. Analysis of whole-GEnome (AGE) has been applied to species identification across plants, animals, and fungi. However, its applicability to the authentication of components in TCPMs remains to be evaluated. In this study, AGE was performed to identify Panax notoginseng in TCPMs. Bioinformatic analysis of nine genome assemblies from six Panax species yielded 4 289 410 specific target sequences of P. notoginseng, from which a species-specific target sequence database was constructed. Target sequences were selected and validated by Sanger sequencing. Four molecular techniques including PCR combined with agarose gel electrophoresis, PCR coupled with Sanger sequencing, TaqMan probe-based quantitative PCR, and high-resolution melting analysis were employed to detect the target sequence, thereby establishing identification methods for P. notoginseng. These assays were further applied to commercial TCPMs, all of which were successfully detected to contain P. notoginseng. Therefore, AGE enables accurate identification of components in TCPMs, offering new insights and technologies for quality control of TCPMs.

analysis of whole-GEnome  /  traditional Chinese patent medicine  /  Panax notoginseng  /  species identification
娄千, 史志杰, 甘雨桐, 辛天怡, 许文杰, 宋经元. 基于时珍法的市售中成药中三七真伪鉴定研究. 药学学报, 2026 , 61 (6) : 2320 -2328 . DOI: 10.16438/j.0513-4870.2025-1542
Qian LOU, Zhi-jie SHI, Yu-tong GAN, Tian-yi XIN, Wen-jie XU, Jing-yuan SONG. Identification of Panax notoginseng in traditional Chinese patent medicines based on analysis of whole-GEnome[J]. Acta Pharmaceutica Sinica, 2026 , 61 (6) : 2320 -2328 . DOI: 10.16438/j.0513-4870.2025-1542
Year 2026 volume 61 Issue 6
191
92
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Article Info
doi: 10.16438/j.0513-4870.2025-1542
  • Receive Date:2025-12-22
  • Online Date:2026-09-21
  • Published:2026-06-12
Article Data
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History
  • Received:2025-12-22
  • Revised:2026-03-10
Affiliations
    1Key Lab of Chinese Medicine Resources Conservation, State Administration of Traditional Chinese Medicine of the People's Republic of China, State Key Laboratory of Bioactive Substance and Function of Natural Medicines, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100193, China
    2Engineering Research Center of Chinese Medicine Resource, Ministry of Education, Beijing 100193, China
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表12种不同金属材料的力学参数
科
Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)
属
Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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