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Virtual screening and activity study of antiviral compounds targeting inosine 5′-monophosphate dehydrogenase
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Shi-bo KOU, Rong-mei GAO, Hong YI, Lian-qi SUN, Yu-huan LI, Zhuo-rong LI*
Acta Pharmaceutica Sinica | 2022, 57(10) : 3011 - 3018
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Acta Pharmaceutica Sinica | 2022, 57(10): 3011-3018
Special Reports Ⅰ: New Targets, New Strategies for Drug Discovery and Advances in Antiviral Drug Research
Virtual screening and activity study of antiviral compounds targeting inosine 5′-monophosphate dehydrogenase
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Shi-bo KOU, Rong-mei GAO, Hong YI, Lian-qi SUN, Yu-huan LI, Zhuo-rong LI*
Affiliations
  • Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, China
Published: 2022-10-12 doi: 10.16438/j.0513-4870.2022-0644
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Inosine 5′-monophosphate dehydrogenase (IMPDH) is a key enzyme catalyzing the rate-limiting step of de novo nucleotide synthesis in vivo. In recent years, it has become a therapeutic target for anti-virus, anti-bacterial, anti-cancer, anti-parasitic and other diseases. IMPDH inhibitors have been shown to inhibit viral prolife-ration in host cells by depleting guanosine 5′-monophosphate (GMP), the raw material required for viral replication in host cells, with broad-spectrum antiviral properties. In order to find novel anti-coronavirus drugs, this study screened 22 potential IMPDH inhibitors from 70 000 natural small molecule libraries based on IMPDH protein structure using molecular docking and ROC calculation for virtual screening. With ribavirin as the positive control drug, Huh7 cell and H460 cell models were used to verify the anti-coronavirus HCoV-229E and HCoV-OC43 activities of 22 selected target compounds. Among them, compounds 11, 12, 15 and 16 showed inhibitory activity against coronavirus HCoV-229E. The compounds 4, 12, 13 and 15 showed inhibitory activities against coronavirus HCoV-OC43. 12 and 15 showed significant inhibitory activity against both two coronaviruses, and their efficacy was similar to ribavirin at the same dose, which can be further studied as a lead compound for IMPDH inhibitors.

inosine 5′-monophosphate dehydrogenase  /  inhibitor  /  molecular docking  /  coronavirus  /  activity screening
Shi-bo KOU, Rong-mei GAO, Hong YI, Lian-qi SUN, Yu-huan LI, Zhuo-rong LI. Virtual screening and activity study of antiviral compounds targeting inosine 5′-monophosphate dehydrogenase[J]. Acta Pharmaceutica Sinica, 2022 , 57 (10) : 3011 -3018 . DOI: 10.16438/j.0513-4870.2022-0644
Year 2022 volume 57 Issue 10
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doi: 10.16438/j.0513-4870.2022-0644
  • Receive Date:2022-05-25
  • Online Date:2025-12-24
  • Published:2022-10-12
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  • Received:2022-05-25
  • Revised:2022-06-13
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    Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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