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Analysis of fungal diversity on the surface of Armeniacae Semen Amarum using a DNA metabarcoding technique
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Meng-yue GUO1, 2, Jing-sheng YU1, 2, Wen-jun JIANG1, 2, Xiao-hui PANG1, 2, *
Acta Pharmaceutica Sinica | 2021, 56(8) : 2295 - 2301
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Acta Pharmaceutica Sinica | 2021, 56(8): 2295-2301
Original Articles
Analysis of fungal diversity on the surface of Armeniacae Semen Amarum using a DNA metabarcoding technique
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Meng-yue GUO1, 2, Jing-sheng YU1, 2, Wen-jun JIANG1, 2, Xiao-hui PANG1, 2, *
Affiliations
  • 1. Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100193, China
  • 2. Engineering Research Center of Chinese Medicine Resources, Ministry of Education, Beijing 100193, China
Published: 2021-08-12 doi: 10.16438/j.0513-4870.2021-0119
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Medicinal and edible Armeniacae Semen Amarum (ASA) is susceptible to fungal contamination because it is rich in oil and other nutrients. In this study, the fungal community diversity in ASA samples was analyzed based on a DNA metabarcoding technique to provide evidence for its safe use. Twelve batches of ASA samples samples from four medicinal material markets and three processing approaches were collected. Total DNA was extracted, the ITS2 sequences were amplified, and high-throughput sequencing was performed using the Illumina MiSeq PE300 platform. The results show that Ascomycota was the most dominant fungus in ASA samples. The predominant genus in sample SW1_P was Diutina, whereas the most predominant genus in the other samples was Aspergillus. Three harmful fungi were identified, namely, Aspergillus flavus, Wallemia sebi, and Rhizopus arrhizus. In addition, significant differences were observed in the relative abundance of Botryosphaeriales and Alternaria in ASA samples from different collection sites. Meanwhile, there were significant differences in the relative abundance of Hypocreales and Cladosporium in ASA samples from different processing approaches. In summary, the DNA metabarcoding technique can effectively clarify the fungal community diversity and quickly detect potential toxigenic fungi in ASA samples, thus providing a warning for mycotoxin contamination.

Armeniacae Semen Amarum  /  DNA metabarcoding  /  high-throughput sequencing  /  fungal diversity  /  ITS2
Meng-yue GUO, Jing-sheng YU, Wen-jun JIANG, Xiao-hui PANG. Analysis of fungal diversity on the surface of Armeniacae Semen Amarum using a DNA metabarcoding technique[J]. Acta Pharmaceutica Sinica, 2021 , 56 (8) : 2295 -2301 . DOI: 10.16438/j.0513-4870.2021-0119
Year 2021 volume 56 Issue 8
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Article Info
doi: 10.16438/j.0513-4870.2021-0119
  • Receive Date:2021-01-22
  • Online Date:2025-12-18
  • Published:2021-08-12
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History
  • Received:2021-01-22
  • Revised:2021-03-19
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Affiliations
    1. Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100193, China
    2. Engineering Research Center of Chinese Medicine Resources, Ministry of Education, Beijing 100193, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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