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The mechanism research of Xiaoyan Lidan formula for the intervention of chronic intrahepatic cholestasis based on metabolomics combined with molecular docking analysis
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Si-min CHEN1, Jin-hao HUANG1, De-qin WANG2, Yu-ying XIA2, Mei-qi WANG1, Run-feng SHI3, Fang-le LIU1, Chen-chen ZHU1, Chao-zhan LIN1, *
Acta Pharmaceutica Sinica | 2023, 58(11) : 3408 - 3420
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Acta Pharmaceutica Sinica | 2023, 58(11): 3408-3420
Original Articles
The mechanism research of Xiaoyan Lidan formula for the intervention of chronic intrahepatic cholestasis based on metabolomics combined with molecular docking analysis
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Si-min CHEN1, Jin-hao HUANG1, De-qin WANG2, Yu-ying XIA2, Mei-qi WANG1, Run-feng SHI3, Fang-le LIU1, Chen-chen ZHU1, Chao-zhan LIN1, *
Affiliations
  • 1. School of Pharmaceutical Sciences, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
  • 2. Hutchison Whampoa Guangzhou Bai Yunshan Chinese Medicine Co., Ltd., Guangzhou 510000, China
  • 3. The First Clinical Medical College of Southern Medical University, Guangzhou 510515, China
Published: 2023-11-12 doi: 10.16438/j.0513-4870.2023-0452
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In this study, the mechanism of Xiaoyan Lidan formula (XYLDF) against 3, 5-diethoxycarbonyl-1, 4-dihydro-2, 4, 6-collidine (DDC)-induced chronic intrahepatic cholestasis (CIHC) in mice was investigated based on metabolomics, molecular docking and pharmacological methods. In the pharmacodynamics study, a dosage of 5 g·kg-1 (clinical equivalent) XYLDF was administered in DDC-induced mice, then the effect of XYLDF against CIHC was evaluated by measuring the levels of alanine aminotransferase (ALT), aspartate aminotransferase (AST), alkaline phosphatase (AKP) as well as total bilirubin (TBIL) in serum and observing liver histopathological changes. All experiments were approved by the Ethical Committee Experimental Animal Center of Guangzhou University of Chinese Medicine (ZYD-2021-001). The serum metabolites of mice in each group were detected and identified based on ultra-performance liquid chromatography quadrupole time-of-flight tandem mass spectrometry, and the relevant biological pathways and molecular key targets were further enriched. Molecular docking technology was used to further evaluate the binding activity of the main active ingredients of XYLDF with potential targets. Subsequently, the in vitro experiment was conducted for the validation of the vital target. The results showed that compared with the model group, XYLDF significantly decreased the levels of ALT, AST, AKP and TBIL in the serum of CIHC mice, as well as alleviated inflammatory infiltration and hepatocyte necrosis in liver tissue. According to the metabonomic study, a total of 35 differential metabolites was identified as biomarkers associated with cholestasis, 12 of which were significantly recovered by XYLDF treatment. These biomarkers were involved in the pathways of primary bile acid biosynthesis and linoleic metabolism, which are closely related to the mechanism of XYLDF against CIHC. Protein-protein interaction network indicated that cytochrome P450 3A4 (CYP3A4) and cytochrome P450 1A1 (CYP1A1) are significant potential targets with good binding properties with six major active ingredients of XYLDF. Furthermore, it was found that 4-methoxy-5-hydroxycanthin-6-one, dehydroandrographolide and isodocarpin, three of the main active components in XYLDF, markedly induced the expression of CYP3A4 mRNA in vitro. This study revealed that XYLDF mainly mediates the biosynthesis of bile acids in CIHC mice to improve liver tissue lesions and bile efflux disorders, among which, CYP3A4 is the key target in the protection of XYLDF against CIHC. This research provides a reference for further elucidation of the pharmacological mechanism of XYLDF.

Xiaoyan Lidan formula  /  chronic intrahepatic cholestasis  /  metabolomics  /  molecular docking
Si-min CHEN, Jin-hao HUANG, De-qin WANG, Yu-ying XIA, Mei-qi WANG, Run-feng SHI, Fang-le LIU, Chen-chen ZHU, Chao-zhan LIN. The mechanism research of Xiaoyan Lidan formula for the intervention of chronic intrahepatic cholestasis based on metabolomics combined with molecular docking analysis[J]. Acta Pharmaceutica Sinica, 2023 , 58 (11) : 3408 -3420 . DOI: 10.16438/j.0513-4870.2023-0452
Year 2023 volume 58 Issue 11
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Article Info
doi: 10.16438/j.0513-4870.2023-0452
  • Receive Date:2023-04-11
  • Online Date:2025-11-21
  • Published:2023-11-12
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History
  • Received:2023-04-11
  • Revised:2023-07-17
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Affiliations
    1. School of Pharmaceutical Sciences, Guangzhou University of Chinese Medicine, Guangzhou 510006, China
    2. Hutchison Whampoa Guangzhou Bai Yunshan Chinese Medicine Co., Ltd., Guangzhou 510000, China
    3. The First Clinical Medical College of Southern Medical University, Guangzhou 510515, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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