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Genome-wide identification and functional analysis of the JAZ gene family in Tripterygium wilfordii
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Ke-yan WANG, Li-mei TANG, Lin-jie WU, Yu-ting WANG, Xia-wei CHEN, Li-chan TU*
Acta Pharmaceutica Sinica | 2025, 60(4) : 1156 - 1165
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Acta Pharmaceutica Sinica | 2025, 60(4): 1156-1165
Original Articles
Genome-wide identification and functional analysis of the JAZ gene family in Tripterygium wilfordii
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Ke-yan WANG, Li-mei TANG, Lin-jie WU, Yu-ting WANG, Xia-wei CHEN, Li-chan TU*
Affiliations
  • School of Medicine, Hangzhou City University, Hangzhou 310015, China
Published: 2025-04-12 doi: 10.16438/j.0513-4870.2024-1147
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JAZ proteins, as inhibitors in the jasmonic acid (JA) signaling pathway, play a crucial role in regulating plant growth and development, as well as the biosynthesis of secondary metabolites in plants. To explore the functions of the JAZ gene family in Tripterygium wilfordii, our study systematically identified the members of the JAZ gene family in T. wilfordii. We analyzed their physicochemical properties, chromosome localization, phylogenetic tree, and protein conserved motifs. Additionally, we investigated the expression patterns of TwJAZs in different tissues, constructed a gene regulatory network map, and ultimately cloned the full-length sequences of 18 JAZ genes. The results showed that the 18 TwJAZs were unevenly distributed across 12 chromosomes, encoding amino acid numbers ranging from 122 to 525, with molecular weights of 13.87 to 54.73 kDa, and isoelectric points ranging from 6.83 to 10.27. Subcellular localization prediction indicated that 13 TwJAZs were localized in the nucleus, while 5 TwJAZs were located in the cytoplasm and chloroplasts. The phylogenetic tree analysis revealed that the JAZ family proteins of T. wilfordii could be divided into five subfamilies, with members of the same subfamily sharing similar conserved motifs. Expression pattern analysis demonstrated that TwJAZs were predominantly expressed in flowers, leaves, and peeled stems, with most TwJAZs showing the highest expression levels after 4 hours of methyl jasmonate (MeJA) induction. The transcription factor regulatory network shows that TwJAZs are strongly correlated with transcription factor families such as AP2/ERF-ERF, NAC, and bHLH. This study comprehensively identified all the JAZ gene family sequences in T. wilfordii, initially clarifying the structural and functional characteristics of the TwJAZs, and laying an important foundation for further research on the functions and regulatory mechanisms of TwJAZs.

Tripterygium wilfordii  /  JAZ  /  bioinformatics analysis  /  expression pattern  /  gene cloning
Ke-yan WANG, Li-mei TANG, Lin-jie WU, Yu-ting WANG, Xia-wei CHEN, Li-chan TU. Genome-wide identification and functional analysis of the JAZ gene family in Tripterygium wilfordii[J]. Acta Pharmaceutica Sinica, 2025 , 60 (4) : 1156 -1165 . DOI: 10.16438/j.0513-4870.2024-1147
Year 2025 volume 60 Issue 4
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Article Info
doi: 10.16438/j.0513-4870.2024-1147
  • Receive Date:2024-11-19
  • Online Date:2025-10-29
  • Published:2025-04-12
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  • Received:2024-11-19
  • Revised:2025-01-15
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    School of Medicine, Hangzhou City University, Hangzhou 310015, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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