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Identification and expression analysis of cellulose synthase family genes in Aquilaria sinensis
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Xin-yu MI1, 2, Hai-ling QIU1, 2, Fan-yuan GUAN2, Yu-yan ZHENG2, Xiao-hui WANG1, *, She-po SHI1, *
Acta Pharmaceutica Sinica | 2024, 59(1) : 253 - 264
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Acta Pharmaceutica Sinica | 2024, 59(1): 253-264
Original Articles
Identification and expression analysis of cellulose synthase family genes in Aquilaria sinensis
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Xin-yu MI1, 2, Hai-ling QIU1, 2, Fan-yuan GUAN2, Yu-yan ZHENG2, Xiao-hui WANG1, *, She-po SHI1, *
Affiliations
  • 1. Modern Research Center for Traditional Chinese Medicine, Beijing Institute of Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 102488, China
  • 2. School of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing 102488, China
Published: 2024-01-12 doi: 10.16438/j.0513-4870.2023-0490
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Cellulose synthase (CesA), one of the key enzymes in the biosynthesis of cellulose in plants, plays an important role in plant growth and plant resistance. In this study, a total of 21 AsCesA genes from Aquilaria sinensis were systematically identified and the physico-chemical characteristics were analyzed based on genome database and bioinformatical methods. The phylogenetic tree was constructed and the gene location on chromosome, cis-acting elements in the 2 000 basepairs upstream regulatory regions and conservative motifs were analyzed. The AsCesA proteins were mainly located on the plasma membrane. The number of amino acids of the proteins ranged from 390 to 1 261. The isoelectric point distributed from 5.67 to 8.86. All of the 21 AsCesA proteins possessed the transmembrane domains, the number of which was from 6 to 8. The genes were classified into 3 groups according to the phylogenetic relationship. Obvious differences were observed in motif composition in genes from different groups. However, motif2, motif6, motif7 and motif10 were observed in all of AsCesA proteins. Analysis of cis-acting elements indicated that AsCesA genes family has cis-acting elements related to plant hormones, abiotic stresses, and biological processes. Seven AsCesA genes with differential expression were selected according to the calli transcriptome data induced by NaCl at different times and their expression levels under different abiotic stresses were analyzed by quantitative real-time PCR. The results indicated that salt, low temperature, drought, and heavy metal stresses could affect the expression level of AsCesA genes, and the abundance of AsCesA1, AsCesA3 and AsCesA20 showed a significant change, implying their potential important roles to the abiotic stresses. The accumulation pattern of cellulose content under different abiotic stresses was similar to the expression trend of AsCesA genes. Our results provide valuable insights into the role of cellulose synthase in A.sinensis in plant defense.

Aquilaria sinensis  /  cellulose synthase  /  bioinformatics  /  abiotic stress  /  expression analysis
Xin-yu MI, Hai-ling QIU, Fan-yuan GUAN, Yu-yan ZHENG, Xiao-hui WANG, She-po SHI. Identification and expression analysis of cellulose synthase family genes in Aquilaria sinensis[J]. Acta Pharmaceutica Sinica, 2024 , 59 (1) : 253 -264 . DOI: 10.16438/j.0513-4870.2023-0490
Year 2024 volume 59 Issue 1
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Article Info
doi: 10.16438/j.0513-4870.2023-0490
  • Receive Date:2023-04-27
  • Online Date:2025-11-28
  • Published:2024-01-12
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  • Received:2023-04-27
  • Revised:2023-08-14
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    1. Modern Research Center for Traditional Chinese Medicine, Beijing Institute of Traditional Chinese Medicine, Beijing University of Chinese Medicine, Beijing 102488, China
    2. School of Chinese Pharmacy, Beijing University of Chinese Medicine, Beijing 102488, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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