收藏切换
Identification and expression analysis of 2-ODD gene family involved in flavonoid biosynthesis pathway in safflower
收藏切换
PDF
Xin-tong MA, Mei-hua ZHU, Nan WANG, Xin-yue ZHANG, Qing-yu ZHANG, Yu-fei WANG, Yu-ying HOU, Zhi-ling LI, Na YAO*, Xiu-ming LIU*
Acta Pharmaceutica Sinica | 2021, 56(10) : 2858 - 2866
Less
收藏切换
Acta Pharmaceutica Sinica | 2021, 56(10): 2858-2866
Original Articles
Identification and expression analysis of 2-ODD gene family involved in flavonoid biosynthesis pathway in safflower
Full
Xin-tong MA, Mei-hua ZHU, Nan WANG, Xin-yue ZHANG, Qing-yu ZHANG, Yu-fei WANG, Yu-ying HOU, Zhi-ling LI, Na YAO*, Xiu-ming LIU*
Affiliations
  • Ministry of Education Engineering Research Center of Bioreactor and Pharmaceutical Development, College of Life Science, Jilin Agricultural University, Changchun 130118, China
Published: 2021-10-12 doi: 10.16438/j.0513-4870.2021-0633
Outline
收藏切换

Flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and anthocyanin synthase (ANS) are members of the 2-oxoglutarate-dependent oxygenase (2-ODD) superfamily, which play important functions in plant flavonoid biosynthesis. In this study, 16 2-ODD genes involved in flavonoid biosynthesis pathway were screened and identified from safflower genome database using bioinformatics method. The length of the proteins encoded by these genes ranged from 283 (CtFLS2) to 442 aa (CtANS6), and the molecular weight ranged from 32 062.05 (CtFLS2) to 48 245.49 Da (CtANS6). The proteins encoded by these genes were hydrophilic. Phylogeny divided it into three subfamilies, two conserved residues, H-x-D-xn-H and R-x-S, were found in this gene family using conserved motifs analysis, the analysis of cis-acting elements in the upstream 2 000 bp region showed that these genes might be regulated by environmental factors such as light, temperature and plant hormones such as salicylic acid, methyl jasmonate and so on. The members of the safflower 2-ODD gene family involved in flavonoid biosynthesis pathway were analyzed by qRT-PCR, the result showed that the expression patterns of these members were different in diverse flowering period and leaf. This study can lay a foundation for further exploring the function of 2-ODD genes involved in flavonoid biosynthesis pathway in safflower.

safflower  /  flavonoids  /  2-oxoglutarate-dependent oxygenase  /  bioinformatics  /  expression analysis
Xin-tong MA, Mei-hua ZHU, Nan WANG, Xin-yue ZHANG, Qing-yu ZHANG, Yu-fei WANG, Yu-ying HOU, Zhi-ling LI, Na YAO, Xiu-ming LIU. Identification and expression analysis of 2-ODD gene family involved in flavonoid biosynthesis pathway in safflower[J]. Acta Pharmaceutica Sinica, 2021 , 56 (10) : 2858 -2866 . DOI: 10.16438/j.0513-4870.2021-0633
Year 2021 volume 56 Issue 10
PDF
220
104
Cite this Article
BibTeX
Article Info
doi: 10.16438/j.0513-4870.2021-0633
  • Receive Date:2021-04-27
  • Online Date:2025-12-18
  • Published:2021-10-12
Article Data
Affiliations
History
  • Received:2021-04-27
  • Revised:2021-06-15
Funding
Affiliations
    Ministry of Education Engineering Research Center of Bioreactor and Pharmaceutical Development, College of Life Science, Jilin Agricultural University, Changchun 130118, China
References
Share
https://castjournals.cast.org.cn/joweb/yxxb/EN/10.16438/j.0513-4870.2021-0633
Share to
QR

Scan QR to access full text

Cite this article
BibTeX
Citations
表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
关闭全屏
  • BibTeX
  • EndNote
  • RefWorks
  • TxT