Objective To establish a pre-amplified quantitative real-time polymerase chain reaction (qPCR) method for the detection of Oncorhynchus mykiss source components. Methods The study developed an enhanced pre-amplified qPCR method, which was based on the validation and improvement of the existing standard qPCR method and compared the performance of both methods. Results Specificity testing of the standard qPCR method revealed cross-reactivity with closely related species, such as Coho salmon and Atlantic salmon. The established improved pre-amplified qPCR method, which incorporated a pre-amplification step, exhibited high specificity and no cross amplification was observed for Coho salmon, Atlantic salmon and other closely related species. The amplification efficiencies of the standard qPCR and the pre-amplified qPCR methods were 90.25% and 104.91%, respectively. The lowest limits of detection of the 2 kinds of methods were 2.99×10-3 ng/μL (0.83-8.87 pg/μL, 95% confidence interval) for the standard qPCR and 1.50×10-4 ng/μL (0.09-0.27 pg/μL, 95% confidence interval) for the pre-amplified qPCR. Conclusion The method established in this study has the characteristics of strong specificity, high sensitivity, and is suitable for authenticity and adulteration detection of Oncorhynchus mykiss source components in food products.
| 科 Family | 属数 Number of genus | 种数 Number of species | 占总种数比例 Percentage of total species (%) | 属 Genus | 种数 Number of species | 占总种数比例 Percentage of total species (%) |
|---|---|---|---|---|---|---|
| 鹅膏菌科Amanitaceae | 2 | 11 | 5.26 | 鹅膏菌属 Amanita | 10 | 4.78 |
| 小菇科 Mycenaceae | 2 | 12 | 5.74 | 丝盖伞属 Inocybe | 5 | 2.39 |
| 多孔菌科 Polyporaceae | 8 | 14 | 6.70 | 蜡蘑属 Laccaria | 5 | 2.39 |
| 红菇科 Russulaceae | 3 | 23 | 11.00 | 小皮伞属 Marasmius | 6 | 2.87 |
| 小菇属 Mycena | 11 | 5.26 | ||||
| 光柄菇属 Pluteus | 5 | 2.39 | ||||
| 红菇属 Russula | 17 | 8.13 | ||||
| 栓菌属 Trametes | 5 | 2.39 |