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Genomic analysis of high temperature resistant Bacillus amyloliticus BA-DES4
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Dong-Zhuo WEN1, Zhi ZHANG2, *
Journal of Food Safety & Quality | 2025, 16(6) : 10 - 16
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Journal of Food Safety & Quality | 2025, 16(6): 10-16
Special Topic: Application of Fermentation Technology in Food
Genomic analysis of high temperature resistant Bacillus amyloliticus BA-DES4
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Dong-Zhuo WEN1, Zhi ZHANG2, *
Affiliations
  • 1. College of Cereals, Oils and Foodstuffs, Jilin Engineering Vocational College, Siping 136001, China
  • 2. College of Life Sciences, Northeast Forestry University, Harbin 150040, China
Published: 2025-03-25 doi: 10.19812/j.cnki.jfsq11-5956/ts.20241110001
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Objective To process, annotate and analyze the genomic data of the high temperature resistant Bacillus amyloliticus BA-DES4 by biological software and databases, and to functionally annotate the strain characteristics at the gene level. Methods Metabolic signaling pathways were analyzed by metabolic signaling pathways kyoto encyclopedia of genes and genomes (KEGG) and gene ontology (GO), clusters of orthologous groups of proteins (COG), non-redundant protein (NR) database, etc., which were compared with the predicted gene sequences to obtain the gene function annotation table. The protein sequences of the predicted genes were compared with COG, KEGG and GO databases for BLASTP analysis, to realize the prediction of gene annotation information and function prediction. Results The database analysis showed that the number of bases was 4188731, and the GC content accounted for 46.18%. There were 4445 protein genes, with a total length of 3696380 bp. Functional annotation of genomic protein coding genes showed that the highest proportion of COG-annotated genes was for G (carbohydrate transport and metabolism), followed by K (transcription), which indicated that protein genes encoded in the COG database were mainly involved in the basic cellular function. The GO annotation revealed that the predominant gene types and genes were classified under biological processes. The carbohydrate-active enzymes (CAZy) annotation identified hydrolytic enzymes as the most prevalent category. The KEGG annotation showed that carbohydrate metabolism accounted for the highest number of genes. In the environmental information category, information transduction emerged as the most significant percentage. In the high-temperature resistant Bacillus amyloliticus BA-DES4, 11 genes were found to encode cellulases, with β-glucosidase and endoglucanase being the genes encoding enzymes. Conclusion In this study, the genomic data of Bacillus amyloliticus BA-DES4 is processed, annotated and analysed in order to further explore the research potential of the strain, to better investigate the regulatory mechanism of cellulose production in Bacillus amyloliticus BA-DES4 and to provide a theoretical basis for subsequent experiments.

Bacillus amyloliticus  /  cellulase  /  genome
Dong-Zhuo WEN, Zhi ZHANG. Genomic analysis of high temperature resistant Bacillus amyloliticus BA-DES4[J]. Journal of Food Safety & Quality, 2025 , 16 (6) : 10 -16 . DOI: 10.19812/j.cnki.jfsq11-5956/ts.20241110001
Year 2025 volume 16 Issue 6
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doi: 10.19812/j.cnki.jfsq11-5956/ts.20241110001
  • Receive Date:2024-11-10
  • Online Date:2025-07-19
  • Published:2025-03-25
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  • Received:2024-11-10
Affiliations
    1. College of Cereals, Oils and Foodstuffs, Jilin Engineering Vocational College, Siping 136001, China
    2. College of Life Sciences, Northeast Forestry University, Harbin 150040, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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