Epizoic diatoms on marine copepods are common in nature and may have a special ecological relationship with their hosts. However, this special ecological group is not well known, and it has only rarely been studied in the China seas. To address this knowledge gap, the species diversity and classification of epizoic diatoms on planktonic copepods were studied with samples collected from the East China Sea. In the present study, a marine araphid diatom genus Protoraphis and its type species, Pr. hustedtiana, were observed and identified by light and electron microscopy, thus representing the first record of this genus and its type species in China. This genus is characterized by a median sternum strongly bent to opposite sides and terminate in two transapical grooves at the valve ends. Protoraphis hustedtiana was found to be epizoic on the posterior body appendages and segments of the marine calanoid copepod Candacia bradyi. An internal view shows a complex, ear-shaped process that is close to the apical slit field. The ecological habitats and geographical distributions of Protoraphis were also discussed, and, together with complementary morphological studies, our results have increased the number of records for marine epizoic diatoms to three genera with three species in China, including Pseudohimantidium and Pseudofalcula.

The ridgetail white prawn Exopalaemon carinicauda is a euryhaline shrimp species in the estuarine and coastal areas of China. In this study, survival rates, transcription levels of two prophenoloxidase system-related genes (EcLGBP and EcproPO) and PO activity were determined quantitatively in juvenile and adult E. carinicauda under different salinity levels. The results showed that E. carinicauda juveniles could survive in a wider range of salinity conditions than adults. For juvenile E. carinicauda, the expression levels of EcLGBP and EcProPO were up-regulated in low salinities and showed no significant difference at 20–40, while PO activities in low salinities were higher compared to those in high salinities. For adult E. carinicauda, the expression profiles of EcLGBP and EcproPO had a different trend of up-regulation in salinity stress treatments and no obvious difference was observed in the gene expression levels and PO activity between 30 and 40. The salinity tolerance range of immunity for juvenile and adult E. carinicauda is 20–40 and 30–40, respectively.

Seasonal fishing closures are often used in fisheries management to conserve overfished stocks. As one of the unintended consequences, fishermen often contend for maximizing catches immediately after reopening fisheries. The resultant large catch landings in a short time period (i.e., pulse fishing) may undermine the benefit of closure. We implemented an end-to-end model OSMOSE-JZB (Object-oriented Simulator of Marine ecOSystem Exploitation OSMOSE) modelling ecosystem in the Jiaozhou Bay located in China to evaluate the impact of pulse fishing on the effectiveness of seasonal closure at levels of fish community, population, and individual. Our study demonstrated that the three-month closure was successful in conserving fish stocks. There were small variations on ecological indicators (i.e., total biomass of the community, mean trophic level of the community, mean trophic level of the catch, and Shannon-Wiener biodiversity index) when pulse fishing occurred. Pulse fishing seemed not to result in a great shift in community structure. Compared to other species, the biomass of two large predatory fishes were more susceptible to pulse fishing. Pulse fishing could change the pressure of predators to fish stocks via food webs, especially for young individuals. Our simulations indicate that we can improve the effectiveness of seasonal closure by managing pulse fishing. Although the results derived in this study may be specific to the target ecosystem, the general approach is applicable to other ecosystems when evaluating fishing impacts.

Vertical variability in the bio-optical properties of seawater in the northern South China Sea (NSCS) including inherent optical properties (IOPs) and chlorophyll a concentration (Chl) were studied on the basis of in situ data collected in summer 2008 using an absorption/attenuation spectrophotometer. An empirical model was developed to estimate Chl profiles based on the absorption line height at long wavelengths, with a relative root mean square error of 37.03%. Bio-optical properties exhibited large horizontal and vertical spatial variability. As influenced by coastal upwelling and the Zhujiang River (Pearl River) discharge, both IOPs and Chl exhibited high values in the surface waters of the inner shelf, which tended to decrease with distance offshore. Subsurface maximum layers of IOPs and Chl were observed in the middle and outer shelf regions, along with significantly higher values of attenuation coefficients beneath this layer that rapidly increased towards the bottom. In the open ocean, both IOPs and Chl exhibited consistent variability, with the subsurface maximum layer typically located at 34–84 m. Phytoplankton were found to be one of the major components in determining the vertical variability of bio-optical properties, with their vertical dynamics influenced by both physical forcing and light attenuation effects. The depth of the subsurface maximum layer was found to be closely related to the fluctuation of the oceanic thermocline and the depth of the euphotic zone, which also affected the total integrated biomass of the upper ocean. Typically high values of attenuation coefficients observed in the bottom waters of the continental shelf reflected the transport of particulate matter over the bottom boundary layer. Our results reveal large spatial differences in bio-optical profiles in response to complex marine ecodynamics in the NSCS. From the perspective of marine research, high-resolution optical measurements are clearly advantageous over conventional bottle sampling.

Current characteristics and vertical variations during summer and autumn in the southern East China Sea were investigated by measuring current profile, tide, wind, and wave data for 90 d from July 28 to October 25, 2015. Our results are: (1) The current was mainly a (clockwise) rotating flow, displaying reciprocating flow characteristics, and vertically the current directions were the same throughout the vertical profile. (2) The horizontal current speed was strongest during August (summer) with an average speed of 51.8 cm/s. The average current speeds during spring tides were highest in August and weakest in September, with speeds of 59.9 and 42.8 cm/s, respectively. (3) Considerable differences exist in average current speeds in different layers and seasons. The highest average current speeds were found in the middle–upper layers in August and in the middle–lower layers in September and October. (4) The residual current speed was highest in August, when the speed was 12.5–47.1 cm/s, whereas the vertical average current speed was 34.3 cm/s. The depth-averaged residual current speeds in September and October were only 50% of that in August, and the residual current direction gradually rotated in a counter-clockwise direction from the lower to surface layers. (5) Typhoon waves had a significant influence on the currents, and even affected the middle and lower water layers at depths of >70.0 m. Our results showed that the currents are controlled by the dynamic interplay of the Taiwan Warm Current, incursion of the Kuroshio Current onto the continental shelf, and monsoonal changes.

The influences of tropical cyclone paths and shelf bathymetry on the inducement of extreme sea levels in a regional bay are investigated. A finite volume coastal ocean model (FVCOM) has been configured for the Gulf of Thailand-Sunda Shelf. A parametric wind model is used to drive the FVCOM. The contributions of the tropical cyclone characteristics are determined through a scenario-based study. Validation based on a historical extreme sea level event shows that the model can resolve the oscillation mechanism well. The intensification of severe storm surges in the region highly depends on four factors including phase propagation of the storm surge wave determined by the landfall position, funnel effect caused by locality of the coastline, and shelf bathymetry determined by the state of mean sea level and coastline crossing angle of the storm path. The coexistence of these factors can cause particular regions e.g. the Surat Thani Bay, inner Gulf of Thailand and Ca Mau Peninsular to experience a larger surge magnitude. These areas are found to be highly related to monsoon troughs that develop during the onset and early northeastern monsoon season (October–November).

Monsoon driven water mass exchange between the Bay of Bengal (BoB) and Arabian Sea (AS) is the common experience. However, it is not yet firmly confirmed that the exchange pathway is either passing through southern tip of Sri Lanka or Palk Strait. Local circulation patterns impact the pathways followed by the East Indian Coastal Currents (EICC) that drive exchange, thereby modulating mixing and water mass transformation in the Bay of Bengal around Sri Lanka. In this study, observations from surface drifters were incorporated with the satellite derived data to understand the monsoonal impact on circulation patterns in the Indian Ocean. This was the first multi-national scientific effort which was conducted in the BoB and AS during 2013 to 2015 to understand the monsoonal impact on circulation patterns in the complex region. The results indicated that seasonally reversing monsoonal currents of southern Sri Lanka, traced by the wintertime freshwater export pathways of the EICC. The deflection of monsoon currents running along the east coast of Sri Lanka by forming cyclonic and anti-cyclonic eddies, which influence the mixing and stirring associated with these flows. Results further indicate the low salinity cold water flows from the BoB to AS along the western boundary of the BoB during northeast monsoon. In the same way, reverses the phenomena during southwest monsoon, transporting high salinity warm water from AS to the BoB. This maintain the bay status which occurred due to freshwater influx from large rivers and high saline water from AS. However, no evidences were observed for the exchange through Palk Strait during the study. Also, there are some mis-matches in in-situ and remotely sensed measurements which imply the necessity of systematic observation system for the complex region as an alternative approach.

Using AVISO satellite altimeter observations during 1993–2015 and a manual eddy detection method, a total of 276 anticyclonic rings and 242 cyclonic rings shed from the Kuroshio Extension (KE) were identified, and their three-dimensional (3D) anomaly structures were further reconstructd based on the Argo float data and the Japan Agency for Marine-Earth Science and Technology (JAMSTEC) cruise and buoy data through an interpolation method. It is found that the cyclonic (anticyclonic) rings presented consistent negative (positive) anomalies of potential temperature; meanwhile the relevant maximum anomaly center became increasingly shallow for the cyclonic rings whereas it went deeper for the anticyclonic rings as the potential temperature anomaly decreased from the west to the east. The above deepening or shoaling trend is associated with the zonal change of the depth of the main thermocline. Moreover, the composite cold ring between 140° and 150°E was found to exhibit a double-core vertical structure due to the existence of mode water with low potential vorticity. Specifically, a relatively large negative (positive) salinity anomaly and a small positive (negative) one appeared for the composite cyclonic (anticyclonic) ring at the depth above and below 600 m, respectively. The underlying driving force for the temperature and salinity anomaly of the composite rings was also attempted, which varies depending on the intensity of the background current and the temperature and salinity fields in different areas of the KE region, and the rings’ influences on the temperature and salinity could reach deeper than 1 000 m on average.

Climate feedbacks have been usually estimated using changes in radiative effects associated with increased global-mean surface temperature. Feedback uncertainties, however, are not only functions of global-mean surface temperature increase. In projections by global climate models, it has been demonstrated that the geographical variation of sea surface temperature change brings significant uncertainties into atmospheric circulation and precipitation responses at regional scales. Here we show that the spatial pattern of surface warming is a major contributor to uncertainty in the combined water vapour-lapse rate feedback. This is demonstrated by computing the global-mean radiative effects of changes in air temperature and relative humidity simulated by 31 climate models using a methodology based on radiative kernels. Our results highlight the important contribution of regional climate change to the uncertainty in climate feedbacks, and identify the regions of the world where constraining surface warming patterns would be most effective for higher skill of climate projections.

The continental slope in the northern South China Sea (SCS) is rich in mesoscale eddies which play an important role in transport and retention of nutrients and biota. In this study, we investigate the statistical properties of eddy distributions and propagation in a period of 24 years between 1993 and 2016 by using the altimeter data. A total of 147 eddies are found in the continental slope region (CSR), including 70 cyclonic eddies (CEs) and 77 anticyclonic eddies (ACEs). For those eddies that appear in the CSR, the surrounding areas of Dongsha Islands (DS) and southwest of Taiwan (SWT) are considered as the primary sources, where eddies generated contribute more than 60% of the total. According to the spatial distribution of eddy relative vorticity, eddies are weakening as propagating westward. Although both CEs and ACEs roughly propagate along the slope isobaths, there are discrepancies between CEs and ACEs. The ACEs move slightly faster in the zonal direction, while the CEs tend to cross the isobaths with large bottom depth change. The ACEs generally move further into the basin areas after leaving the CSR while CEs remain around the CSR. The eddy propagation on the continental slope is likely to be associated with mean flow at a certain degree because the eddy trajectories have notable seasonal signals that are consistent with the seasonal cycle of geostrophic current. The results indicate that the eddy translation speed is statistically consistent with geostrophic velocity in both magnitude and direction.