One of the key concerns in estuarine and coastal environments is eutrophication, which is known to be closely connected to nutrient enrichment. To control and improve surface water quality, nutrient criteria are recommended in order to provide reference conditions for the environment. However, the current datasets of nutrient criteria in China are either designed for surface water or sea water, and as such these are not suitable for assessing estuarine water quality, especially given the unique ecosystem and dynamic properties of estuaries. To address this issue in current estuarine water management, nutrient criteria have been developed for a local estuary in the southeast of China. Segmentation of the Jiulong River Estuary, China was firstly analysed through field investigations carried out during 2013–2014, which resulted in the delineation of three segments characterized by their distinct properties in relation to salinity, hydrology, ecosystems, etc. Historical records from 1997 to 2014 were then analysed using statistical modelling to develop candidate nutrient criteria for the estuary. This stage of the analysis was undertaken in combination with the study of nutrient status records from the 1980s, which were used to establish a baseline reference condition. The recommended criteria values of dissolved inorganic nitrogen (DIN) in Segments I, II and III of the Jiulong River Estuary are 64, 21 and 14 μmol/L, respectively, and the corresponding values for soluble reactive phosphorus (SRP) are 0.89, 0.76 and 0.89 μmol/L, respectively. It should be emphasised that these values are site-dependent, and that different results may be achieved at other locations depending on the physical and biogeochemical characteristics of an estuary, or even a single site within a catchment. It is hoped that by demonstrating a possible methodological approach and methods of nutrient criteria derivation in the Jiulong River Estuary, the current study will offer researchers some fundamental basis from which to begin to develop more complete nutrient criteria indices for the study of nutrient conditions in other estuaries throughout China.

The Liwan Sag, with an area of 4 000 km², is one of the deepwater sags in the Zhujiang River (Pearl River) Mouth Basin, northern South China Sea. Inspired by the exploration success in oil and gas resources in the deepwater sags worldwide, we conducted the thermal modeling to investigate the tectono-thermal history of the Liwan Sag, which has been widely thought to be important to understand tectonic activities as well as hydrocarbon potential of a basin. Using the multi-stage finite stretching model, the tectonic subsidence history and the thermal history have been obtained for 12 artificial wells, which were constructed on basis of one seismic profile newly acquired in the study area. Two stages of rifting during the time periods of 49–33.9 Ma and 33.9–23 Ma can be recognized from the tectonic subsidence pattern, and there are two phases of heating processes corresponding to the rifting. The reconstructed average basal paleo-heat flow values at the end of the rifting events are ~70.5 and ~94.2 mW/m² respectively. Following the heating periods, the study area has undergone a persistent thermal attenuation phase since 23 Ma and the basal heat flow cooled down to ~71.8–82.5 mW/m² at present.

The Qiongdongnan Basin and Zhujiang River (Pearl River) Mouth Basin, important petroliferous basins in the northern South China Sea, contain abundant oil and gas resource. In this study, on basis of discussing impact of oil-base mud on TOC content and Rock-Eval parameters of cutting shale samples, the authors did comprehensive analysis of source rock quality, thermal evolution and control effect of source rock in gas accumulation of the Qiongdongnan and the Zhujiang River Mouth Basins. The contrast analysis of TOC contents and Rock-Eval parameters before and after extraction for cutting shale samples indicates that except for a weaker impact on Rock-Eval parameter S₂, oil-base mud has certain impact on Rock-Eval S₁, Tmax and TOC contents. When concerning oil-base mud influence on source rock geochemistry parameters, the shales in the Yacheng/Enping, Lingshui/Zhuhai and Sanya/Zhuhai Formations have mainly Type II and III organic matter with better gas potential and oil potential. The thermal evolution analysis suggests that the depth interval of the oil window is between 3 000 m and 5 000 m. Source rocks in the deepwater area have generated abundant gas mainly due to the late stage of the oil window and the high-supper mature stage. Gas reservoir formation condition analysis made clear that the source rock is the primary factor and fault is a necessary condition for gas accumulation. Spatial coupling of source, fault and reservoir is essential for gas accumulation and the inside of hydrocarbon-generating sag is future potential gas exploration area.

The southern uplift of the Qiongdongnan Basin is a deepwater area in which no wells have beens drilled. The Miocene-Quaternary strata in the Xisha Islands, which are located 40–100 km to the south, are composed of carbonate reef formations. Paleotectonic and paleogeographic analyses of the basin suggest that the southern uplift experienced favorable geological conditions for the development of carbonate reefs during the Miocene. The high-impedance carbonates have high amplitudes and low frequencies on seismic profiles. The reefs are distributed on paleotectonic highs and are thicker than the contemporaneous formations. A forward model of the variation in carbonate thickness based on lithological and velocity information from wells in nearby regions can simulate the seismic response of carbonates with different thicknesses. We identified several important controlling points for determining the thickness of carbonates from seismic profiles, including the pinchout point, the λ/4 thickness point, and the λ/2 thickness point. We depict a carbonate thickness map in the deepwater area of the southern Qiongdongnan Basin based on this model. The carbonate thickness map, the paleotectonic and paleogeographic background, and the seismic response characteristics of reefs suggest that the carbonates that developed on the southern uplift of the Qiongdongnan Basin during the Miocene were mainly an isolated carbonate platform peninsula and ramp deposits. It consisted of gentle ramp platform, steep slope platform, platform depression, gravity flow, and reef bank facies.

The southern Patagonian stock (SPS) of Argentinian shortfin squid, Illex argentinus, is an economically important squid fishery in the Southwest Atlantic. Environmental conditions in the region play an important role in regulating the population dynamics of the I. argentinus population. This study develops an environmentally dependent surplus production (EDSP) model to evaluate the stock abundance of I. argentines during the period of 2000 to 2010. The environmental factors (favorable spawning habitat areas with sea surface temperature of 16–18°C) were assumed to be closely associated with carrying capacity (K) in the EDSP model. Deviance Information Criterion (DIC) values suggest that the estimated EDSP model with environmental factors fits the data better than a Schaefer surplus model without environmental factors under uniform and normal scenarios. The EDSP model estimated a maximum sustainable yield (MSY) from 351 600 t to 685 100 t and a biomass from 1 322 400 t to 1 803 000 t. The fishing mortality coefficient of I. argentinus from 2000 to 2010 was smaller than the values of F_0.1 and F_MSY. Furthermore, the time series biomass plot of I. argentinus from 2000 to 2010 shows that the biomass of I. argentinus and this fishery were in a good state and not presently experiencing overfishing. This study suggests that the environmental conditions of the habitat should be considered within squid stock assessment and management.

Geochemical and detrital zircon U-Pb dating data for drilled sediments from the Baiyun deepwater area of the northern South China Sea demonstrate a change of sedimentary sources from the Oligocene to the Miocene. Zircon ages of the pre-rift Eocene sequences are dominated by Yanshanian ages with various peak values (110–115 Ma for U1435 and L21; 150 Ma for H1), indicating local sediment supply from the pre-existing Mesozoic magmatic belt. For the Oligocene sediments in the northern part of the basin, the rare earth elements show different distribution characteristics, indicating sediment supply from the paleo-Zhujiang River (Pearl River), as also confirmed by the multimodal zircon age spectra of the Lower Oligocene strata in Well X28. By contrast, a positive Eu anomaly characterizes sediments from the western and southern parts of the basin, indicating potential provenances from intermediate to basic volcanic rock materials. The Baiyun Movement at the end of the Oligocene contributed to a large-scale subsidence in the deepwater area and also a northward retreat of continental shelf break, leading to deepening depositional environment in the basin. As a result, all the detrital zircon ages of the Upper Oligocene strata from Wells X28, L13, and L21 share a similar distribution, implying the possible control of a common source like the Zhujiang River. During the Miocene, whereas sediments in the northern area were mainly sourced from the Zhujiang River Delta, and those in the southern deepwater area continued to be affected by basic volcanic activities, the Dongsha Uplift could have contributed as the main source to the eastern area.

The Okinawa Trough (OT) is a back-arc basin at an initial spreading stage that is under the influence of subduction of the Philippine Sea Plate. In this study, we analyzed the geochemical compositions of basaltic glass in the OT and discussed the effects of different magmatic sources, evolution, and subducted components in basalts. Our results showed that the middle and southern regions of the OT exhibit characteristics consistent with an iron-rich tholeiite series. Trace element proportions conform to the typical spider diagram pattern characteristic of back-arc basin basalts, rich in large ion lithophile elements (LILEs) including Rb, Ba, Pb, U, and Th, while depleted in high field-strength elements (HFSEs) including Nb, Ta, Zr, Hf, and Ti. The distribution of rare earth elements (REEs) is also consistent with enrichment by right-leaning light rare earth elements (LREEs). The addition of enriched mantle type I (EMI) materials as well as mantle heterogeneity may have led to variable degrees of enrichment in different regions. The magma source of the middle trough has undergone crystallization towards pyroxene, while development of plagioclase was restricted partly, and the crystallization of spinel and olivine ceased altogether. At the same time, crystallization of the southern OT magma source was dominated by olivine and including the formation of plagioclase, pyroxene, and magnetite (or titanomagnetite). Finally, the results of this study showed that 90% Th, 95% Ba in the southern basalt, 50%–70% Th and 70%–90% Ba in the middle basalt originated from subducted component. Different subducted component influence may be due to different subduction zone structural feature.

BMP2 plays crucial roles in vertebrate developmental process and acts as a bone inducer during osteogenesis. We present here the molecular cloning of bmp2 cDNA from the marine flatfish Cynoglossus semilaevis, and the analysis of bmp2 expression profiling and promoter function. The full length of bmp2 cDNA sequence is 2 048 bp, which encodes a protein of 422 amino acids. Tissue expression distribution of bmp2 was examined in 14 tissues of mature individuals by quantitative real time PCR (qRT-PCR). The results revealed that bmp2 was expressed ubiquitously, and the highest expression level was detected in the spinal cord. Moreover, bmp2 expression levels were detected at 15 sampling time points of early developmental stages (egg, larva, juvenile and fingerling stages). The highest expression level of bmp2 was observed at the gastrula stage, which was about ten times higher than those at the other three embryo stages. Whole-mount in situ hybridization showed that the bmp2 signal was strongly detected at the location of the crown-like larval fin, heart and liver, and slightly expressed in the notochord at one day post hatch (dph); then the expression of bmp2 started to be concentrated in notochord at three dph. Subsequently, we characterized the 5′-flanking region of bmp2 by testing the promoter activity by Luciferase reporter assays. Positive regulatory region was detected at the location of –179 to +109. The predicted transcription factor binding sites (E-box binding factors, zinc finger transcription factor, etc.) in this region might participate in the transcriptional regulation of the bmp2 gene.

The Oligocene Huagang Formation is the main sandstone reservoir in the Xihu Sag, situated in the east of the East China Sea Shelf Basin. With an integrated approach of thin-section petrography, ultra-violet fluorescence microscopy, scanning electron microscopy, and isotope geochemistry, the different diagenetic features were identified, the typical diagenetic parasequences were established, and the diagenetic fluids evolution history were reconstructed for the Oligocene Huagang Formation sandstone reservoir in the south of Xihu Sag. The Huagang Formation sandstone reservoir is now in Period B of the mesodiagenesis, which has undergone significant diagenetic alterations such as mechanical compaction, Pore-lining chlorite cement, feldspar dissolution, quartz cementation and dissolution, and carbonate cementation. Three types of carbonate cements (early siderite, medium ferrocalcite and late ankerite) were identified in the Huagang Formation sandstone reservoir. The carbon and oxygen isotopic compositions of carbonate cements show that the early calcite precipitate from alkaline lacustrine environment whereas the late carbonate cements were closely related to the organic acids. To the Huagang Formation sandstone reservoir, it has experienced two main episodes of dissolution during diagenesis. The early dissolution is that unstable components such as feldspar, lithic fragments, and carbonate cement were dissolved by acidic water. The second dissolution is that quartz and other silicate minerals were dissolved under the alkaline condition. Two main phases of hydrocarbon charging occurred in this study area. The first hydrocarbon emplacement was prior to the medium carbonate cementation but posterior to feldspar dissolution and the onset of quartz cementation at the end of the Miocene. The second hydrocarbon charging occurred in the Quaternary period after the late carbonate precipitation.

The size-fractionated biomass and primary production of phytoplankton, and the influence of environmental factors on it were studied in the Dongsha natural gas hydrate zone of the northern South China Sea in May 2013. Low nutrient, low chlorophyll a (Chl a) and primary productivity characteristics were found in these waters. The phenomena of subsurface Chl a maximum layers (SCMLs) and primary production maximum layers (SPMLs) were observed in the Dongsha waters. There were significant differences in the size-fractionated biomass and primary production that showed picophytoplankton>nanophytoplankton>microphytoplankton in terms of biomass and degree of contribution to production. Vertical biomass distribution indicated there were considerable differences among different phytoplankton within the euphotic zone (Zeu) in spring. For example, microphytoplankton was distributed evenly in the euphotic layer and nanophytoplankton was mainly distributed in the subsurface or in the middle of the euphotic layer, while picophytoplankton was mainly distributed in the middle or bottom of the euphotic layer. Smaller cell size and larger relative surface area allow picophytoplankton to benefit from nutrient competition and to hold a dominant position in the tropical oligotrophic waters of low latitudes. There was a positive correlation between size-fractionated biomass and temperature with pH and a negative correlation between size-fractionated biomass and silicate with phosphate. There was a positive correlation between size-fractionated primary production and temperature and a negative correlation between size-fractionated biomass and salinity with phosphate. Phosphate was an important factor influencing the size structure of phytoplankton. Meanwhile, irradiation and the euphotic layer were more important in regulating the vertical distribution of size-fractionated phytoplankton in the Dongsha natural gas hydrate zone.