Article(id=1276975991637537019, tenantId=1146029695717560320, journalId=1276577828834349082, issueId=1276975955985961244, articleNumber=null, orderNo=null, doi=10.19540/j.cnki.cjcmm.20250929.401, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1755619200000, receivedDateStr=2025-08-20, revisedDate=null, revisedDateStr=null, acceptedDate=null, acceptedDateStr=null, onlineDate=1782384401472, onlineDateStr=2026-06-25, pubDate=1767196800000, pubDateStr=2026-01-01, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1782384401472, onlineIssueDateStr=2026-06-25, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1782384401472, creator=13701087609, updateTime=1782384401472, updator=13701087609, issue=Issue{id=1276975955985961244, tenantId=1146029695717560320, journalId=1276577828834349082, year='2026', volume='51', issue='1', pageStart='1', pageEnd='300', issueExtLink='null', onlineDate='null', pubDate='1767196800000', pubDateStr='2026-01-01', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=null, createTime=1782384392973, creator='13701087609', updateTime=1782384484405, updator='13701087609', preIssue=null, nextIssue=null, articleTotal=null, ext={EN=IssueExt(id=1276976339546673871, tenantId=1146029695717560320, journalId=1276577828834349082, issueId=1276975955985961244, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1276976339546673872, tenantId=1146029695717560320, journalId=1276577828834349082, issueId=1276975955985961244, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null, downloadFileDto=null}, startPage=73, endPage=82, ext={EN=ArticleExt(id=1276975992442843389, articleId=1276975991637537019, tenantId=1146029695717560320, journalId=1276577828834349082, language=EN, title=Identification of Aux/IAA gene family in Atractylodes lancea and their response to auxin, columnId=null, journalTitle=Chinese Journal of Traditional Chinese Medicine, columnName=null, runingTitle=null, highlight=null, articleAbstract=

Using the whole-genome data of Atractylodes lancea, members of the auxin (Aux)/indole-3-acetic acid (IAA) gene family were identified and characterized, and the effects of 1-naphthaleneacetic acid (NAA) treatment on the expression levels of this gene family were investigated, providing a foundation for further studies on the functions of the A. lancea Aux (AlAux)/IAA gene family. Members of the AlAux/IAA gene family were identified from the A. lancea whole-genome data using TBtools-Ⅱ. Bioinformatics software was employed to analyze the physicochemical properties of the encoded proteins, construct a phylogenetic tree, and predict conserved motifs and gene structures. Tissue-cultured seedlings of A. lancea were used as experimental materials, and key genes of the AlAux/IAA gene family were screened by transcriptome sequencing. The expression of key AlAux/IAA genes was analyzed after one month of NAA treatment. A total of 53 AlAux/IAA genes were identified from the A. lancea genome. Most AlAux/IAA proteins were localized in the nucleus, lacked transmembrane domains, and exhibited negative hydrophobicity. Among them, 44 AlAux/IAA genes were predicted to encode functional Aux/IAA transport proteins. Transcriptome sequencing and RT-qPCR analyses showed that the AlAux/IAA family genes exhibited spatiotemporal expression specificity, and different members displayed varying response times and intensities to NAA treatment. Tissue-specific expression analysis revealed that the AlAux/IAA gene family was generally highly expressed in flowers. This study identified the Aux/IAA gene family members in A. lancea, preliminarily analyzed their sequence characteristics, and examined their expression features in response to Aux. It is speculated that AlAux/IAA13 and AlAux/IAA38 may be involved in rooting and bud growth and development during the subculture process of A. lancea tissue-cultured seedlings. These results provide a theoretical basis for elucidating the molecular mechanisms of AlAux/IAA gene function and Aux-mediated regulation of rhizome growth in A. lancea.

, authors=null, authorsList=Lei CHEN, Zi-mo HE, Yuan-yuan CHEN, Lin-qi SUN, Meng WANG, Xiao HUANG, Juan DENG, Qian LI, Kun YU, authorCompany=null, correspAuthors=Kun YU, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1276975993348813056, articleId=1276975991637537019, tenantId=1146029695717560320, journalId=1276577828834349082, language=CN, title=茅苍术Aux/IAA基因家族鉴定及其对生长素的响应分析, columnId=1276975992786776318, journalTitle=中国中药杂志, columnName=分子生药学, runingTitle=null, highlight=null, articleAbstract=

利用茅苍术全基因组数据，识别鉴定生长素（Aux）/吲哚-3-乙酸（IAA）基因家族成员，并探究萘乙酸（NAA）处理对这一家族基因表达量的影响，为进一步研究茅苍术Aux（AlAux）/IAA基因家族的功能提供基础。利用TBtools-Ⅱ从茅苍术全基因组数据中鉴定AlAux/IAA基因家族成员，使用生物信息学分析软件分析蛋白质理化性质，构建系统进化树，预测基因保守基序和基因结构。以茅苍术组培苗为实验材料，通过转录组测序筛选AlAux/IAA基因家族关键基因，分析NAA处理1个月中关键AlAux/IAA基因的表达情况。茅苍术全基因组鉴定得到53个AlAux/IAA基因。AlAux/IAA蛋白大部分定位于细胞核内，不含跨膜区，为负疏水性，有44个AlAux/IAA基因可能编码功能性Aux/IAA转运蛋白。转录组测序和RT-qPCR分析表明，AlAux/IAA家族基因表达有时空特异性，各成员对NAA响应的时间和强度有所差异，组织差异性表达结果显示AlAux/IAA基因家族总体上在花中表达量较高。该研究获得了茅苍术Aux/IAA基因家族序列，初步分析了序列特征，并分析了该基因家族响应Aux的表达特征，推测AlAux/IAA13、AlAux/IAA38可能参与茅苍术组培苗继代培养生根和芽的生长发育，为揭示AlAux/IAA基因功能和Aux调控茅苍术根茎生长的分子机制提供理论依据。

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陈雷，博士研究生，E-mail: 1261089410@qq.com

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陈雷，博士研究生，E-mail: 1261089410@qq.com

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