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Effects of strawberry root rot on rhizosphere bacterial community structure and screening and identification of strains with biocontrol potential
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Panpan MENG1, 2, Juan ZHAO2, Yayong LIU2, Ying LI2, Taotao ZHANG2, Jinhui WANG1, Wentao QIN2
Acta Microbiologica Sinica | 2026, 66(8) : 3824 - 3838
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Acta Microbiologica Sinica | 2026, 66(8): 3824-3838
Research Article
Effects of strawberry root rot on rhizosphere bacterial community structure and screening and identification of strains with biocontrol potential
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Panpan MENG1, 2, Juan ZHAO2, Yayong LIU2, Ying LI2, Taotao ZHANG2, Jinhui WANG1, Wentao QIN2
Affiliations
  • 1.College of Plant Protection, Hebei Agricultural University, Baoding, Hebei, China
  • 2.Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
Published: 2026-08-04 doi: 10.13343/j.cnki.wsxb.20260074
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[Objective] We investigated the characteristics of rhizosphere bacterial communities of healthy and root rot-infected strawberry plants across different plots, as well as their correlations with soil physicochemical properties, aiming to discover and isolate beneficial rhizosphere bacteria with significant inhibitory effects against strawberry root rot pathogens to support disease management. [Methods] We utilized high-throughput sequencing combined with bioinformatics analysis to elucidate the differential characteristics and influencing factors of rhizosphere bacterial communities between healthy and diseased strawberry plants. Then, we employed the dilution plate method and dual culture assay to isolate antagonistic bacteria. Subsequently, we determined the taxonomic status of these beneficial strains by combining morphological observation with multi-gene phylogenetic analysis. [Results] The bacterial community diversity varied across different cultivation bases. Compared with that of healthy plants, the rhizosphere soil samples of diseased strawberry plants from the Xinzhuang and Kangshou bases showed decreased bacterial InvSimpson, Chao1, and Shannon evenness indices (P>0.05). Conversely, the rhizosphere soil samples of diseased strawberry plants from the Taolin base showed increased InvSimpson and Shannon evenness indices (P<0.05). Beta diversity analysis revealed that root rot significantly altered the microbial community structure. The complexity and stability of the rhizosphere bacterial co-occurrence network decreased in the diseased samples. Redundancy analysis indicated that soil total organic carbon, available phosphorus, and total potassium were the primary physicochemical factors shaping the bacterial community structure in strawberry rhizosphere. We isolated two bacterial strains, N2-10 and N2-18, that exhibited significant antagonistic activity from the healthy strawberry rhizosphere. The two strains demonstrated inhibition rates ranging from 55.6% to 62.2% and 54.5% to 66.7%, respectively, against the tested strawberry root rot pathogens. We identified strains N2-10 and N2-18 as Bacillus cereus and Bacillus velezensis, respectively. [Conclusion] We clarify how root rot affects strawberry rhizosphere bacterial communities and identify two beneficial rhizosphere bacterial strains with strong biocontrol potential. These findings provide a theoretical basis and valuable strain resources for elucidating the mechanisms of strawberry root rot and developing microbial-based green control technologies.

root rot  /  rhizosphere bacterial community  /  antagonistic bacteria  /  biocontrol  /  strawberry
Panpan MENG, Juan ZHAO, Yayong LIU, Ying LI, Taotao ZHANG, Jinhui WANG, Wentao QIN. Effects of strawberry root rot on rhizosphere bacterial community structure and screening and identification of strains with biocontrol potential[J]. Acta Microbiologica Sinica, 2026 , 66 (8) : 3824 -3838 . DOI: 10.13343/j.cnki.wsxb.20260074
  • Beijing Academy of Agriculture and Forestry Sciences Innovation Capacity Building Project(KJCX20251201)
  • Beijing Academy of Agriculture and Forestry Sciences Innovation Capacity Building Project(KJCX20240405)
  • National Natural Science Foundation of China(32502601)
Year 2026 volume 66 Issue 8
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Article Info
doi: 10.13343/j.cnki.wsxb.20260074
  • Receive Date:2026-01-26
  • Online Date:2026-08-21
  • Published:2026-08-04
Article Data
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History
  • Received:2026-01-26
  • Accepted:2026-03-04
Funding
Beijing Academy of Agriculture and Forestry Sciences Innovation Capacity Building Project(KJCX20251201)
Beijing Academy of Agriculture and Forestry Sciences Innovation Capacity Building Project(KJCX20240405)
National Natural Science Foundation of China(32502601)
Affiliations
    1.College of Plant Protection, Hebei Agricultural University, Baoding, Hebei, China
    2.Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China

Corresponding:

E-mail: QIN Wentao, ;
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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