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Building of the Engineered Microorganisms and Genetic Tools Collection Center of China for the intelligent and digital era: concepts, approaches, and prospects
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Xiaopeng LI1, 2, 3, Xueqiang CAO1, 2, 3, Yan FENG4, Xiang XIAO4, Lei LI4, Xiaojun ZHANG3, 4
Acta Microbiologica Sinica | 2026, 66(4) : 1473 - 1492
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Acta Microbiologica Sinica | 2026, 66(4): 1473-1492
Special Section
Building of the Engineered Microorganisms and Genetic Tools Collection Center of China for the intelligent and digital era: concepts, approaches, and prospects
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Xiaopeng LI1, 2, 3, Xueqiang CAO1, 2, 3, Yan FENG4, Xiang XIAO4, Lei LI4, Xiaojun ZHANG3, 4
Affiliations
  • 1.Institute of Translational Medicine, Shanghai Jiao Tong University, Shanghai, China
  • 2.National Facility for Translational Medicine, Shanghai, China
  • 3.Engineered Microorganisms and Genetic Tools Collection Center of China, Ministry of Education, Shanghai, China
  • 4.State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China
Published: 2026-04-04 doi: 10.13343/j.cnki.wsxb.20250912
Outline
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Engineered microorganisms, as the core driving force of biomanufacturing and the development of the new bio-economy, demonstrate increasingly prominent strategic values. The newly built Engineered Microorganisms and Genetic Tools Collection Center of China (EMTCC) supported by the Ministry of Education aims to break through the limitations of “microbial culture collection centers” and provide a comprehensive resource innovation service platform supported by information technology and integrating resource acquisition, intelligent creation, data analysis, and open sharing functions. This platform intends to meet the needs of basic research, technology development, and industrial applications. This article elaborates on the building framework of EMTCC, which takes large-scale resource preservation as the basis, intelligent mining and analysis as the core, and digital storage and computing sharing as the link. By carrying out large-scale acquisition and standardized preservation of natural and engineered microorganisms and plasmids and integrating cutting-edge technologies such as high-throughput automation, multi-omics, single-cell analysis, artificial intelligence prediction models, and digital twins, the EMTCC achieves a complete process of “acquisition & preservation, analysis & identification, and data sharing”. On the basis of drawing on the standardization and quality control systems of internationally renowned institutions such as American Type Culture Collection (ATCC), a resource repository model integrating living “organisms, information, and intelligence” will be developed. This innovative practice is expected to provide strong resource guarantee and technical support for research innovation and industrial upgrading in the fields of synthetic biology, metabolic engineering, biomedicine, and environmental remediation.

Engineered Microorganisms and Genetic Tools Collection Center of China  /  data sharing  /  synthetic biology  /  artificial intelligence  /  digital twin
Xiaopeng LI, Xueqiang CAO, Yan FENG, Xiang XIAO, Lei LI, Xiaojun ZHANG. Building of the Engineered Microorganisms and Genetic Tools Collection Center of China for the intelligent and digital era: concepts, approaches, and prospects[J]. Acta Microbiologica Sinica, 2026 , 66 (4) : 1473 -1492 . DOI: 10.13343/j.cnki.wsxb.20250912
  • Microbial Resource Technology Center Launches Project(WH510132401/013)
Year 2026 volume 66 Issue 4
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Article Info
doi: 10.13343/j.cnki.wsxb.20250912
  • Receive Date:2025-12-08
  • Online Date:2026-04-14
  • Published:2026-04-04
Article Data
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History
  • Received:2025-12-08
  • Accepted:2026-02-06
Funding
Microbial Resource Technology Center Launches Project(WH510132401/013)
Affiliations
    1.Institute of Translational Medicine, Shanghai Jiao Tong University, Shanghai, China
    2.National Facility for Translational Medicine, Shanghai, China
    3.Engineered Microorganisms and Genetic Tools Collection Center of China, Ministry of Education, Shanghai, China
    4.State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China

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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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