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The bZIP gene family in Setosphaeria turcica: identification and expression analysis during HT-toxin induction process
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Shuhong ZHANG1, Yunfeng ZHANG1, Fengju GAO1, Qiuying WU1, Yazi LI1, Ke XU1, Yongshan FAN1, *, Yuwei LIU2, *
Acta Microbiologica Sinica | 2025, 65(1) : 283 - 302
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Acta Microbiologica Sinica | 2025, 65(1): 283-302
Research Articles
The bZIP gene family in Setosphaeria turcica: identification and expression analysis during HT-toxin induction process
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Shuhong ZHANG1, Yunfeng ZHANG1, Fengju GAO1, Qiuying WU1, Yazi LI1, Ke XU1, Yongshan FAN1, *, Yuwei LIU2, *
Affiliations
  • 1 Tangshan Key Laboratory of Agricultural Pathogenic Fungi and Toxins, Hebei Key Laboratory of Plant Biotechnology Research and Application, Faculty of Life Science, Tangshan Normal University, Tangshan 063000, Hebei, China
  • 2 Hebei Bioinformatic Utilization and Technological Innovation Center for Agricultural Microbes, College of Life Sciences, Hebei Agricultural University, Baoding 071000, Hebei, China
Published: 2025-01-04 doi: 10.13343/j.cnki.wsxb.20240474
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[Objective] The basic leucine zipper (bZIP) factors are a group of large and conserved transcription factors in eukaryotes, and they are involved in the growth, development, and infection of pathogenic fungi in plants. This study aims to identify the bZIP transcription factors in the whole genome of Setosphaeria turcica and explore their functions during HT-toxin induction. [Methods] The members of the bZIP family were screened and identified from the genome database of Setosphaeria turcica, and their physicochemical properties, conserved domains, subcellular localization, cis-acting elements, phylogenetic relationship, and protein-protein interaction network were analyzed. The RNA-seq database was used to analyze the expression of bZIP family members during pathogen infection and HT-toxin induction. [Results] Fourteen bZIP family members (StbZIP1–14) were screened from the genome of Setosphaeria turcica, with significant differences in physical and chemical properties. These factors had the lengths of 226–613 aa, relative molecular weights of 25.24–66.30 kDa, isoelectric points of 4.66–10.36, and the subcellular localization in the nucleus. These factors carried 660 cis-acting elements involved in abiotic stress, hormone induction, cell cycle regulation, enhancers, and core promoters. The phylogenetic analysis with 11 other major pathogenic fungi in plants indicated that StbZIPs were clustered into 10 groups and had a clear co-linear relationship with AabZIPs of Alternaria alternata. The expression levels of StbZIP1, StbZIP5, StbZIP7, StbZIP10, and StbZIP11 were significantly correlated with HT-toxin induction, among which StbZIP5 had the highest expression level and demonstrated upregulated expression after 21 days and 28 days of HT-toxin induction. The protein-protein interaction network of StbZIPs predicted three StbZIPs interaction pathways centered on StbZIP5. [Conclusion] The members of the bZIP family of Setosphaeria turcica have significant physicochemical and structural differences, extensive genetic diversity, and significant functional differentiation, playing an important role in transcriptional regulation during HT-toxin induction.

Setosphaeria turcica  /  basic leucine zipper protein  /  phylogenetic analysis  /  HT-toxin  /  expression analysis
Shuhong ZHANG, Yunfeng ZHANG, Fengju GAO, Qiuying WU, Yazi LI, Ke XU, Yongshan FAN, Yuwei LIU. The bZIP gene family in Setosphaeria turcica: identification and expression analysis during HT-toxin induction process[J]. Acta Microbiologica Sinica, 2025 , 65 (1) : 283 -302 . DOI: 10.13343/j.cnki.wsxb.20240474
  • National Natural Science Foundation of China(22078171)
  • Central Guiding Local Science and Technology Development Fund(246Z3610G)
  • Central Guiding Local Science and Technology Development Fund(236Z6507G)
  • Research Funding of Tangshan Normal University(2024PT06)
Year 2025 volume 65 Issue 1
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Article Info
doi: 10.13343/j.cnki.wsxb.20240474
  • Receive Date:2024-07-30
  • Online Date:2026-03-21
  • Published:2025-01-04
Article Data
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History
  • Received:2024-07-30
  • Accepted:2024-09-29
Funding
National Natural Science Foundation of China(22078171)
Central Guiding Local Science and Technology Development Fund(246Z3610G)
Central Guiding Local Science and Technology Development Fund(236Z6507G)
Research Funding of Tangshan Normal University(2024PT06)
Affiliations
    1 Tangshan Key Laboratory of Agricultural Pathogenic Fungi and Toxins, Hebei Key Laboratory of Plant Biotechnology Research and Application, Faculty of Life Science, Tangshan Normal University, Tangshan 063000, Hebei, China
    2 Hebei Bioinformatic Utilization and Technological Innovation Center for Agricultural Microbes, College of Life Sciences, Hebei Agricultural University, Baoding 071000, Hebei, China

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*FAN Yongshan, E-mail:
LIU Yuwei, E-mail:
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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