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Deciphering the driving force of straw-decomposing microbiomes in two native forest soils under biogeographically contrasting conditions
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Yan XING1, 2, Chang LUAN2, Zhiming ZHANG2, Bing HAN2, Hong ZHANG1, Lujun LI2, 4, Yunze RUAN1, Jiabao ZHANG3, 4, Zhongjun JIA2, 3, 4, *
Acta Microbiologica Sinica | 2024, 64(8) : 2901 - 2917
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Acta Microbiologica Sinica | 2024, 64(8): 2901-2917
Research Articles
Deciphering the driving force of straw-decomposing microbiomes in two native forest soils under biogeographically contrasting conditions
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Yan XING1, 2, Chang LUAN2, Zhiming ZHANG2, Bing HAN2, Hong ZHANG1, Lujun LI2, 4, Yunze RUAN1, Jiabao ZHANG3, 4, Zhongjun JIA2, 3, 4, *
Affiliations
  • 1 School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, Hainan, China
  • 2 State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, Jilin, China
  • 3 Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, Jiangsu, China
  • 4 University of Chinese Academy of Sciences, Beijing 100049, China
Published: 2024-04-22 doi: 10.13343/j.cnki.wsxb.20240058
Outline
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[Objective] To investigate the acclimation mechanisms of straw-decomposing microbiomes in response to historically different climate conditions as characterized by extreme temperature distinction, we collected two native forest soil samples from the tropical (annual mean temperature: 25 ℃) and cold-temperate (annual mean temperature: −2 ℃) zones at a distance of 3 860 km. [Methods] Microcosm incubation was conducted at a low temperature (10 ℃), a high temperature (35 ℃), and alternated high and low temperatures (10 ℃/35 ℃). The two native forest soil samples were inoculated for targeted cultivation of straw-decomposing microbiomes. After 12 consecutive weeks of passage, 16S rRNA gene sequencing was carried out to analyze the microbial community composition. [Results] At 10 ℃, higher straw decomposition rate was observed in the forest soil from Changbai Mountain in the cold-temperate zone (15.5%) than that from the tropical zone. At 35 ℃, the decomposition rate in the soil from Sanya in the tropical zone (33.1%) was higher than that from Changbai Mountain The results of linear discriminant analysis effect size (LEfSe) showed that the dominant straw-decomposing genera included Duganella, Pedobacter, Janthinobacterium, and Serratia after 12 weeks of enrichment at 10 ℃ with the forest soil from Changbai Mountain. The dominant genera were Paenibacillus and Rhodanobacter after enrichment at 35 ℃, and Stenotrophomonas, Burkholderia, and Achromobacter after enrichment at 10 ℃/35 ℃. As for the forest soil from the tropical zone, the enriched dominant genera were Pseudomonas, Acinetobacter, and Flavobacterium at 10 ℃, Cupriavidus at 35 ℃, and Enterobacter and Cohnella at 10 ℃/35 ℃. [Conclusion] This study revealed the indicator microbial species for straw decomposition at different temperatures in native forest soils from geographically highly distinct regions with a 3 860 km distance. The results suggest that temperature could have likely played a pivotal role in shaping the microbiomes for straw decomposition. The findings provide a scientific basis for mining the straw-decomposing microbial resources in the cold zone in northeast China and the tropical zone in south China.

temperature difference  /  native forest soil  /  microorganism  /  Cross-adaption to temperature stress  /  straw decomposition
Yan XING, Chang LUAN, Zhiming ZHANG, Bing HAN, Hong ZHANG, Lujun LI, Yunze RUAN, Jiabao ZHANG, Zhongjun JIA. Deciphering the driving force of straw-decomposing microbiomes in two native forest soils under biogeographically contrasting conditions[J]. Acta Microbiologica Sinica, 2024 , 64 (8) : 2901 -2917 . DOI: 10.13343/j.cnki.wsxb.20240058
  • Strategic Priority Research Program of Chinese Academy of Sciences (Category A)(XDA28020203)
  • National Natural Science Foundation of China(32160750)
  • National Natural Science Foundation of China(92251305)
  • Project of Sanya Yazhou Bay Science and Technology City(SCKJ-JYRC-2022-94)
Year 2024 volume 64 Issue 8
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Article Info
doi: 10.13343/j.cnki.wsxb.20240058
  • Receive Date:2024-01-22
  • Online Date:2026-03-19
  • Published:2024-04-22
Article Data
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History
  • Received:2024-01-22
  • Accepted:2024-04-18
Funding
Strategic Priority Research Program of Chinese Academy of Sciences (Category A)(XDA28020203)
National Natural Science Foundation of China(32160750)
National Natural Science Foundation of China(92251305)
Project of Sanya Yazhou Bay Science and Technology City(SCKJ-JYRC-2022-94)
Affiliations
    1 School of Tropical Agriculture and Forestry, Hainan University, Haikou 570228, Hainan, China
    2 State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, Jilin, China
    3 Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, Jiangsu, China
    4 University of Chinese Academy of Sciences, Beijing 100049, China

Corresponding:

*JIA Zhongjun, E-mail:
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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