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Gene knockout reveals the roles of sakA in Aspergillus niger RAF106
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Yunqi ZHU1, 2, #, Gang ZHOU1, 2, #, Tong LIU1, 2, Yingsi WANG1, Sujuan LI1, Ruqun PENG1, Hong PENG1, Qingshan SHI1, Jie WANG2, *, Xiaobao XIE1, *
Acta Microbiologica Sinica | 2024, 64(8) : 2684 - 2701
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Acta Microbiologica Sinica | 2024, 64(8): 2684-2701
Research Articles
Gene knockout reveals the roles of sakA in Aspergillus niger RAF106
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Yunqi ZHU1, 2, #, Gang ZHOU1, 2, #, Tong LIU1, 2, Yingsi WANG1, Sujuan LI1, Ruqun PENG1, Hong PENG1, Qingshan SHI1, Jie WANG2, *, Xiaobao XIE1, *
Affiliations
  • 1 Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, Guangdong, China
  • 2 College of Food Science, South China Agricultural University, Guangzhou 510642, Guangdong, China
Published: 2024-03-28 doi: 10.13343/j.cnki.wsxb.20240012
Outline
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[Objective] The protein SakA encoded by sakA is a member of the mitogen-activated protein kinase (MAPK) family in Aspergillus niger. However, little is known about the roles of SakA in A. niger. In this study, we constructed the A. niger strains with knockout of sakA to investigate the roles of this gene. [Methods] The Agrobacterium-mediated method was utilized to construct ΔsakA strains from A. niger RAF106 (the wild type, WT). The growth and spore production of ΔsakA and WT were observed on three different media. The sensitivity of ΔsakA and WT to different stress conditions was studied. The intracellular and extracellular levels of amylase, pectinase, and cellulase were compared between ΔsakA and WT. Real-time quantitative polymerase chain reaction (qRT-PCR) was employed to determine the relative transcript levels of the genes associated with spore production, amylase, pectinase, cellulase, and hyperosmotic regulation. [Results] Three ΔsakA strains were successfully obtained and verified by PCR and qRT-PCR. The ΔsakA strains had slow growth, delayed spore production, and delayed conidiophore differentiation compared with WT. The ΔsakA strains showcased slower colony growth than WT under the stress conditions of 0.6 mol/L KCl, 0.8 mol/L NaCl, and 1.2 mol/L NaCl. Compared with WT, the knockout of sakA increased the extracellular amylase production by 20.68%–21.43% and decreased the intracellular amylase production by 19.18%–20.26%, decreased the extracellular pectinase production by 36.71%–38.30% and increased the intracellular pectinase production by 35.68%–36.53%, decreased the extracellular cellulase production by 28.04%–33.82% and increased the intracellular cellulase production by 15.28%–18.19%. Compared with WT, the knockout of sakA down-regulated the transcript levels of spore production-related genes (fluG, sfgA, flbA, flbB, flbD, laeA, brlA, abaA, vosA, stuA, and velB) by 8.53%–90.87%. Furthermore, it down-regulated the transcript levels of amylase-related genes (amyC, amyD, amyE, amyF, amyG, and amyH) and the transcription factor (amyR) by 8.87%–87.50%, the pectinase-related genes (aglB, lacA, pexB, pecA, pecC, pecB, endA, endC, and poly) by 23.23%–84.01%, the cellulase-related genes (xlnR, chbA, chbB, and eglB) by 3.75%–81.02%, and the hyperosmotic regulation-related genes (ena1, ena2, sho1, nik1, ypdl, pkA, and hAD) by 5.27%–94.36%. [Conclusion] The sakA gene of A. niger positively regulates spore production and is essential for spore production. The knockout of sakA affects the spore production of A. niger. Furthermore, SakA plays a crucial role in the synthesis and secretion of amylase, pectinase, and cellulase as well as osmotic stress response.

Aspergillus niger  /  sakA  /  mitogen-activated protein kinase (MAPK) signaling pathway  /  spore production  /  osmotic stress  /  metabolism
Yunqi ZHU, Gang ZHOU, Tong LIU, Yingsi WANG, Sujuan LI, Ruqun PENG, Hong PENG, Qingshan SHI, Jie WANG, Xiaobao XIE. Gene knockout reveals the roles of sakA in Aspergillus niger RAF106[J]. Acta Microbiologica Sinica, 2024 , 64 (8) : 2684 -2701 . DOI: 10.13343/j.cnki.wsxb.20240012
  • Natural Science Foundation of Guangdong Province(2023A1515030059)
  • Natural Science Foundation of Guangdong Province(2023A1515012057)
  • Research and Development Plan in Key Areas of Guangdong Province(2022B1111040002)
  • Research and Development Plan in Key Areas of Guangdong Province(2020B020226008)
  • Research and Development Plan in Key Areas of Guangdong Province(2022B0202040002)
  • GDAS' Project of Science and Technology Development(2022GDASZH-2022010101)
Year 2024 volume 64 Issue 8
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Article Info
doi: 10.13343/j.cnki.wsxb.20240012
  • Receive Date:2024-01-05
  • Online Date:2026-03-19
  • Published:2024-03-28
Article Data
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History
  • Received:2024-01-05
  • Accepted:2024-03-21
Funding
Natural Science Foundation of Guangdong Province(2023A1515030059)
Natural Science Foundation of Guangdong Province(2023A1515012057)
Research and Development Plan in Key Areas of Guangdong Province(2022B1111040002)
Research and Development Plan in Key Areas of Guangdong Province(2020B020226008)
Research and Development Plan in Key Areas of Guangdong Province(2022B0202040002)
GDAS' Project of Science and Technology Development(2022GDASZH-2022010101)
Affiliations
    1 Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, Guangdong, China
    2 College of Food Science, South China Agricultural University, Guangzhou 510642, Guangdong, China

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*WANG Jie, E-mail:
XIE Xiaobao, E-mail:
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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