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Biocontrol effects of Streptomyces sp. ZH-356 on plant diseases
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Andong LIU1, 2, Wanqing NING1, 2, 3, Xufei ZHU1, Bolin ZHANG1, Xiaona QU1, Jinlong ZHANG1, Chengnan XU1, Guangwei LI1, Xiangqian ZHANG1, Yanfeng WANG1, Juanli CHENG1, 2, 3, *, Jinshui LIN1, 2, 3, *
Acta Microbiologica Sinica | 2025, 65(3) : 1219 - 1240
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Acta Microbiologica Sinica | 2025, 65(3): 1219-1240
Research Article
Biocontrol effects of Streptomyces sp. ZH-356 on plant diseases
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Andong LIU1, 2, Wanqing NING1, 2, 3, Xufei ZHU1, Bolin ZHANG1, Xiaona QU1, Jinlong ZHANG1, Chengnan XU1, Guangwei LI1, Xiangqian ZHANG1, Yanfeng WANG1, Juanli CHENG1, 2, 3, *, Jinshui LIN1, 2, 3, *
Affiliations
  • 1 Shaanxi Key Laboratory of Research and Utilization of Resource Plants on the Loess Plateau, College of Life Sciences, Yan’an University, Yan’an, Shaanxi, China
  • 2 Yan’an Colony Biological Technology Co. , Ltd. , Yan’an, Shaanxi, China
  • 3 State Key Laboratory for Crop Stress Resistance and High-efficiency Production, Northwest A&F University, Yangling, Shaanxi, China
Published: 2025-03-04 doi: 10.13343/j.cnki.wsxb.20240769
Outline
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[Objective] To evaluate the colonization ability and biocontrol effects of Streptomyces sp. ZH-356 with antagonistic effects on plant pathogenic fungi and reveal the biocontrol mechanism of Streptomyces sp. ZH-356 by omics analysis. [Methods] The colonization of Streptomyces sp. ZH-356 in plants was detected by the GFP fluorescent labeling method. The biocontrol effects and potential of Streptomyces sp. ZH-356 on plant fungal diseases were evaluated based on the biocontrol effects of the inoculant in different dosage forms (seed coating agent, wettable powder, gum inoculant, and bone glue inoculant). The whole genome information of Streptomyces sp. ZH-356 was analyzed by third-generation sequencing, and its gene functions were annotated. The comparative transcriptome analysis was performed to screen the differentially expressed genes during the antagonizing process of Streptomyces sp. ZH-356 against plant pathogenic fungi, and thus the genes involved in the synthesis of antagonistic substances were predicted. [Results] Streptomyces sp. ZH-356 stably colonized the roots and stems of tomato and wheat plants. Different dosage forms of inoculants prepared based on Streptomyces sp. ZH-356 demonstrated strong control effects on tomato early blight and apple valsa canker. Among them, the seed coating agent prepared with Streptomyces sp. ZH-356 did not affect the germination rate of tomato seeds after treatment while protecting tomato seedlings from the infection of Alternaria solani. The wettable powder prepared with Streptomyces sp. ZH-356 showed both prevention and treatment effects on tomato early blight, with the prevention effect stronger than the treatment effect. The liquid inoculants prepared from Streptomyces sp. ZH-356 had control effects on apple Valsa canker, regardless of whether the diseased bark was scraped or not, while the control effect was better when the diseased bark was scraped and better than that of thiophanate-methyl. The whole genome sequencing results showed that Streptomyces sp. ZH-356 contained only one linear chromosome with a size of 9 435 898 bp and the average G+C content of 70.82%. A total of 8 432 coding genes, 69 tRNA genes, and 18 rRNA genes were predicted. Species annotation results showed that Streptomyces sp. ZH-356 did not belong to any Streptomyces species whose genome has been sequenced. Genome-wide analysis showed that there were 32 biosynthetic gene clusters (BGCs) for secondary metabolites in ZH-356. Transcriptomic analysis showed that the expression of the NRPS/T1PKS gene cluster ZH_356_GM000343-ZH_356_GM000422 was significantly up-regulated in the process of antagonizing plant pathogenic fungi, suggesting that it may be a BGC mediating the biosynthesis of active substances against plant pathogenic fungi in Streptomyces sp. ZH-356. Moreover, ZH_356_GM000409 may be the core biosynthetic gene of the active substances. [Conclusion] Streptomyces sp. ZH-356 can colonize plants, and the biocontrol agents prepared based on this strain demonstrate good control effects on plant fungal diseases. The active substances for the antagonistic effects may be synthesized by the gene cluster ZH_356_GM000343-ZH_356_GM000422. The above work lays a foundation for the industrial application of strain ZH-356 and the research on the mechanism of antagonizing plant pathogenic fungi.

Streptomyces  /  colonization  /  inoculant  /  genome sequencing  /  transcriptome sequencing  /  secondary metabolites
Andong LIU, Wanqing NING, Xufei ZHU, Bolin ZHANG, Xiaona QU, Jinlong ZHANG, Chengnan XU, Guangwei LI, Xiangqian ZHANG, Yanfeng WANG, Juanli CHENG, Jinshui LIN. Biocontrol effects of Streptomyces sp. ZH-356 on plant diseases[J]. Acta Microbiologica Sinica, 2025 , 65 (3) : 1219 -1240 . DOI: 10.13343/j.cnki.wsxb.20240769
  • National Natural Science Foundation of China(32070103)
  • Open Project Program of State Key Laboratory for Crop Stress Resistance and High-efficiency Production(SKLCSRHPKF12)
  • Regional Development Talent Project of the “Special Support Plan” of Shaanxi Province(2020-44)
  • Outstanding Young Talent Support Plan of the Higher Education Institutions of Shaanxi Province(2018-111)
  • Youth Innovation Team of Shaanxi Universities(2022-943)
  • “Two Chains” Integration Key Project of Shaanxi Province(2023LLRH-01)
  • Yan’an Science and Technology Plan(2024-JBZ-001)
  • Research Project of Yan’an University(2023HBZ-001)
  • Research Project of Yan’an University(2023CGZH-007)
  • Shaanxi University Student Innovation and Entrepreneurship Training Program(S202310719112)
Year 2025 volume 65 Issue 3
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Article Info
doi: 10.13343/j.cnki.wsxb.20240769
  • Receive Date:2024-12-02
  • Online Date:2026-02-10
  • Published:2025-03-04
Article Data
Affiliations
History
  • Received:2024-12-02
  • Accepted:2024-12-31
Funding
National Natural Science Foundation of China(32070103)
Open Project Program of State Key Laboratory for Crop Stress Resistance and High-efficiency Production(SKLCSRHPKF12)
Regional Development Talent Project of the “Special Support Plan” of Shaanxi Province(2020-44)
Outstanding Young Talent Support Plan of the Higher Education Institutions of Shaanxi Province(2018-111)
Youth Innovation Team of Shaanxi Universities(2022-943)
“Two Chains” Integration Key Project of Shaanxi Province(2023LLRH-01)
Yan’an Science and Technology Plan(2024-JBZ-001)
Research Project of Yan’an University(2023HBZ-001)
Research Project of Yan’an University(2023CGZH-007)
Shaanxi University Student Innovation and Entrepreneurship Training Program(S202310719112)
Affiliations
    1 Shaanxi Key Laboratory of Research and Utilization of Resource Plants on the Loess Plateau, College of Life Sciences, Yan’an University, Yan’an, Shaanxi, China
    2 Yan’an Colony Biological Technology Co. , Ltd. , Yan’an, Shaanxi, China
    3 State Key Laboratory for Crop Stress Resistance and High-efficiency Production, Northwest A&F University, Yangling, Shaanxi, China

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*E-mail: CHENG Juanli:
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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