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Directed cultivation of efficient petroleum hydrocarbon-degrading microbial consortia via gradient domestication and exploitation of functional bacterial resources
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Xueyuan DU1, 2, *, Shupeng LI1, 2, *, Jingcong QIU1, 2, Lili GUO1, 2, Hui CHANG1, 2, Jiachen LI1, 2, Ran ZHANG1, 2, Lijie LI1, 2
Acta Microbiologica Sinica | 2025, 65(8) : 3794 - 3812
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Acta Microbiologica Sinica | 2025, 65(8): 3794-3812
Technology and Method
Directed cultivation of efficient petroleum hydrocarbon-degrading microbial consortia via gradient domestication and exploitation of functional bacterial resources
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Xueyuan DU1, 2, *, Shupeng LI1, 2, *, Jingcong QIU1, 2, Lili GUO1, 2, Hui CHANG1, 2, Jiachen LI1, 2, Ran ZHANG1, 2, Lijie LI1, 2
Affiliations
  • 1.National Engineering Laboratory for Site Remediation Technologies, Beijing, China
  • 2.BCEG Environmental Remediation Co. , Ltd. , Beijing, China
Published: 2025-08-04 doi: 10.13343/j.cnki.wsxb.20250345
Outline
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[Objective] To investigate the structural characteristics of microbial consortia in different concentrations of petroleum hydrocarbons, cultivate efficient petroleum hydrocarbon-degrading microbial consortia, and mine the strain resources capable of degrading petroleum hydrocarbons. [Methods] We used 0# diesel as the sole carbon source to domesticate oil-contaminated soil samples through five successive generations by gradually increasing the 0# diesel concentration. The structural changes of microbial consortia were uncovered by 16S rRNA gene amplicon sequencing. The strains with petroleum hydrocarbon-degrading potential were isolated and purified via dilution plating and streaking. Finally, the improved 2,6-dichlorophenol indophenol (DCPIP) cultivation system was employed to identify efficient degrading strains. [Results] During domestication, when the concentration of 0# diesel was raised to 7 000 mg/L, the relative abundance of petroleum hydrocarbon-degrading bacteria including Bacteroidota and Bacillota significantly increased. A total of 58 bacterial strains belonging to 25 genera, 22 families of 4 phyla were isolated, including 31 (53.45%) strains of Pseudomonadota, 13 (22.41%) strains of Actinomycetota, 11 (18.97%) strains of Bacillota, and 3 (5.17%) strains of Bacteroidota. From the isolated strains, 18 petroleum hydrocarbon-degrading strains were screened out. [Conclusion] Through gradient domestication, seven natural microbial consortia were successfully enriched, achieving over 70% degradation of petroleum hydrocarbons at 7 000 mg/L of 0# diesel. Amplicon sequencing revealed that varying 0# diesel concentrations altered the microbial consortium structure. Additionally, 18 strains capable of using 0# diesel as the sole carbon source were identified, providing potential microbial resources for the bioremediation of oil-contaminated soil.

petroleum hydrocarbon degradation  /  gradient domestication  /  microbial consortium  /  bacterial isolation
Xueyuan DU, Shupeng LI, Jingcong QIU, Lili GUO, Hui CHANG, Jiachen LI, Ran ZHANG, Lijie LI. Directed cultivation of efficient petroleum hydrocarbon-degrading microbial consortia via gradient domestication and exploitation of functional bacterial resources[J]. Acta Microbiologica Sinica, 2025 , 65 (8) : 3794 -3812 . DOI: 10.13343/j.cnki.wsxb.20250345
  • Beijing Construction Engineering Group Science and Technology Project(SA10000000272023051)
Year 2025 volume 65 Issue 8
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Article Info
doi: 10.13343/j.cnki.wsxb.20250345
  • Receive Date:2025-04-27
  • Online Date:2026-02-06
  • Published:2025-08-04
Article Data
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History
  • Received:2025-04-27
  • Accepted:2025-06-20
Funding
Beijing Construction Engineering Group Science and Technology Project(SA10000000272023051)
Affiliations
    1.National Engineering Laboratory for Site Remediation Technologies, Beijing, China
    2.BCEG Environmental Remediation Co. , Ltd. , Beijing, China

Corresponding:

*E-mail: DU Xueyuan:
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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