Article(id=1152687444940993213, tenantId=1146029695717560320, journalId=1149652044408987649, issueId=1152687434774000221, articleNumber=null, orderNo=null, doi=10.19812/j.cnki.jfsq11-5956/ts.20250114002, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1736784000000, receivedDateStr=2025-01-14, revisedDate=null, revisedDateStr=null, acceptedDate=null, acceptedDateStr=null, onlineDate=1752751702771, onlineDateStr=2025-07-17, pubDate=1747238400000, pubDateStr=2025-05-15, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1752751702771, onlineIssueDateStr=2025-07-17, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1752751702771, creator=13701087609, updateTime=1752751702771, updator=13701087609, issue=Issue{id=1152687434774000221, tenantId=1146029695717560320, journalId=1149652044408987649, year='2025', volume='16', issue='9', pageStart='1', pageEnd='324', issueExtLink='null', onlineDate='null', pubDate='null', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=0, createTime=1752751700342, creator=13701087609, updateTime=1756708585928, updator=13701087609, preIssue=null, nextIssue=null, ext={EN=IssueExt(id=1169283815848555430, tenantId=1146029695717560320, journalId=1149652044408987649, issueId=1152687434774000221, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1169283815848555431, tenantId=1146029695717560320, journalId=1149652044408987649, issueId=1152687434774000221, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null}, startPage=240, endPage=247, ext={EN=ArticleExt(id=1152687446799069950, articleId=1152687444940993213, tenantId=1146029695717560320, journalId=1149652044408987649, language=EN, title=Screening, identification and application of Burkholderia antagonizing Aspergillus flavus, columnId=1151895321388347923, journalTitle=Journal of Food Safety & Quality, columnName=Food Analysis and Detection, runingTitle=null, highlight=null, articleAbstract=

Objective To screen a strain that can antagonize the growth of Aspergillus flavus and to identify the strain, study its application and analysis its genetic preliminarily. Methods The microorganisms in the soil of peanut field in Feixian County were used as the research object, and the effective strains were obtained through the screening of Aspergillus flavus standoff test; the effective strains species were determined through morphological observation and 16S rRNA gene analysis and identification; the peanut pods and peanut kernels were infested with the suspension of Aspergillus flavus spores to validate the effective bacteria’s effect of antagonizing the growth of Aspergillus flavus; and the genome characteristics of the bacterial strains and the clusters of genes of secondary metabolites synthesis were analyzed to determine the basic characteristics of the effective bacterial strains. The genomic characteristics of the strain and the secondary metabolite synthesis gene cluster were analyzed to determine the basic characteristics of the effective strain. Results Effective strain G22, which could antagonize the growth of Aspergillus flavus, was obtained by screening. The strain G22 was identified as Burkholderia latens with 99.93% homology and named Burkholderia latens G22 by morphological characterization and gene homology analysis. The fermentation broth of the effective strain had a certain antagonistic effect on the growth of Aspergillus flavus on peanut pods and peanut seed kernels. The genome of the effective strain had 3 chromosomes and 1 plasmid, and the secondary metabolite synthesis gene cluster proved that the effective strain had antagonistic properties. Conclusion Strain G22 has good antagonistic effect on the growth of Aspergillus flavus. The application effect of strain G22 in peanut has important research significance in practice, which will lay a foundation for the further development of microbial fungicides for Aspergillus flavus.

, correspAuthors=Ming-Qing WANG, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, authorCompany=null, fund=null, authors=null, authorsList=Yong YANG, Ji-Guang YU, Wen-Feng SHEN, Li-Na YU, Yu SONG, Jie BI, Yuan GAO, Chen JIANG, Ming-Qing WANG), CN=ArticleExt(id=1152687464197042652, articleId=1152687444940993213, tenantId=1146029695717560320, journalId=1149652044408987649, language=CN, title=拮抗黄曲霉的伯克霍尔德菌的筛选、鉴定及应用, columnId=1151895321958773274, journalTitle=食品安全质量检测学报, columnName=食品分析与检测, runingTitle=null, highlight=null, articleAbstract=

目的 筛选一株能拮抗黄曲霉生长的菌株, 并进行菌株鉴定、应用研究和基因初步分析。方法 以费县花生地土壤的微生物为研究对象, 通过黄曲霉对峙试验筛选得到有效菌; 通过形态学观察和16S rRNA基因分析、鉴定确定有效菌种类; 黄曲霉孢子悬浮液侵染花生荚果和花生籽仁, 验证有效菌拮抗黄曲霉生长的效果; 分析菌株的基因组特征和次生代谢产物合成基因簇, 确定有效菌株的基本特性。结果 筛选获得能拮抗黄曲霉生长的有效菌株G22。通过形态学特征和基因同源性分析, 鉴定菌株G22为伯克霍尔德菌(Burkholderia latens), 同源性达99.93%, 命名为伯克霍尔德菌G22。有效菌株的发酵液对花生荚果和花生籽仁上黄曲霉的生长有一定拮抗作用。有效菌株的基因组有3个染色体和1个质粒, 次生代谢产物合成基因簇证明有效菌株有拮抗特性。结论 菌株G22对黄曲霉生长具有良好的拮抗作用。菌株G22的花生应用效果研究具有重要的实践意义, 为下一步开发黄曲霉的微生物菌剂奠定了基础。

, correspAuthors=王明清, authorNote=null, correspAuthorsNote=
* 王明清(1981—), 男, 博士, 副研究员, 主要研究方向为食品安全。E-mail:
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杨勇(1973—), 男, 高级农艺师, 主要研究方向为农业技术推广。E-mail:

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杨勇(1973—), 男, 高级农艺师, 主要研究方向为农业技术推广。E-mail:

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杨勇(1973—), 男, 高级农艺师, 主要研究方向为农业技术推广。E-mail:

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注: a. 菌株G22; b. 菌株G12; c. 菌株G40; d. 菌株G10; e. 菌株G100; f. 菌株G67; g. 菌株G63; h. 菌株G86; i. 菌株G6; j. 菌株G95; k. 菌株G14; l. 菌株G82; m. 菌株LE160, 阳性对照, 有效菌株拮抗黄曲霉效果图[16]; n. 菌株G44, 阴性对照。

, figureFileSmall=TkvIWkjE2SFmHzgENvef0Q==, figureFileBig=h+h0mK/v0ayzoFtFlBkgpQ==, tableContent=null), ArticleFig(id=1169272742336536709, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=EN, label=Fig.2, caption=Colony morphology of strain G22 on LB broth, figureFileSmall=236qKKoGJL723WRK5Lk0ag==, figureFileBig=5FnDvYWeyXEU98b+UC4oUw==, tableContent=null), ArticleFig(id=1169272742391062663, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=CN, label=图2, caption=菌株G22在LB肉汤上的菌落形态, figureFileSmall=236qKKoGJL723WRK5Lk0ag==, figureFileBig=5FnDvYWeyXEU98b+UC4oUw==, tableContent=null), ArticleFig(id=1169272742466560137, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=EN, label=Fig.3, caption=Phylogenetic tree of strain G22 based on 16S rRNA sequence comparisons, figureFileSmall=9AiyAQRkae9eSA68c+n0OA==, figureFileBig=PlTWm/GttBBzoJRWmIBqzA==, tableContent=null), ArticleFig(id=1169272742533669001, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=CN, label=图3, caption=菌株G22基于16S rRNA序列比较的系统进化树, figureFileSmall=9AiyAQRkae9eSA68c+n0OA==, figureFileBig=PlTWm/GttBBzoJRWmIBqzA==, tableContent=null), ArticleFig(id=1169272742604972170, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=EN, label=Fig.4, caption=Demonstration of strain G22 inhibiting the growth of Aspergillus flavus on peanuts, figureFileSmall=z9y+juRdED8JHjb0P5+PRw==, figureFileBig=fZpokO9+Xgz0RLqtHtftpg==, tableContent=null), ArticleFig(id=1169272742751772811, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=CN, label=图4, caption=菌株G22抑制花生黄曲霉生长的情况

注: A: 菌株G22抑制花生荚果的黄曲霉生长效果图; B: 菌株G22抑制花生籽仁的黄曲霉生长效果图。

, figureFileSmall=z9y+juRdED8JHjb0P5+PRw==, figureFileBig=fZpokO9+Xgz0RLqtHtftpg==, tableContent=null), ArticleFig(id=1169272742856630413, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=EN, label=Fig.5, caption=Specific features of Circular genome of strain G22, figureFileSmall=IJuKo9TsP6IKeX8sFKwMVg==, figureFileBig=zFISuw5sGCqUw19ROk6JSA==, tableContent=null), ArticleFig(id=1169272742936322191, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=CN, label=图5, caption=菌株G22圆形基因组的特定特征, figureFileSmall=IJuKo9TsP6IKeX8sFKwMVg==, figureFileBig=zFISuw5sGCqUw19ROk6JSA==, tableContent=null), ArticleFig(id=1169272743016013969, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=EN, label=Table 1, caption=

Secondary metabolite biosynthetic gene clusters in strain G22

, figureFileSmall=null, figureFileBig=null, tableContent=
基因簇 类型 开始 结束 相似簇 相似性/% MIBiG 序列
基因簇1 非核糖体合成酶 1608791 1663560 鸟苷 93 BGC0001721a
基因簇2 萜烯 1976091 1996925 - - -
基因簇3 芳基多烯 2829253 2870522 APE Vf 10 BGC0000837b
基因簇4 假定蛋白 260355 276839 - - -
基因簇5 糖苷水解酶家族68蛋白 742594 762939 - - -
基因簇6 膦酸酯 904827 946513 膦菊酯三肽 6 BGC0000406c
基因簇7 硬脂内酯 1504395 1525007 头孢菌素A 62 BGC0001897d
基因簇8 萜烯 1741712 1765811 - - -
基因簇9 细菌素 72239 83055 - - -
基因簇10 单位: UTP-葡萄糖-1-磷酸核苷酸基转移酶GalU 535180 578449 - - -
基因簇11 非核糖体合成酶 849707 935136 麝香草因A
94 BGC0001711e
基因簇12 芳基多烯 1000668 1045532 APE Vf 35 BGC0000837f
), ArticleFig(id=1169272743108288659, tenantId=1146029695717560320, journalId=1149652044408987649, articleId=1152687444940993213, language=CN, label=表1, caption=

菌株G22次生代谢产物生物合成基因簇

, figureFileSmall=null, figureFileBig=null, tableContent=
基因簇 类型 开始 结束 相似簇 相似性/% MIBiG 序列
基因簇1 非核糖体合成酶 1608791 1663560 鸟苷 93 BGC0001721a
基因簇2 萜烯 1976091 1996925 - - -
基因簇3 芳基多烯 2829253 2870522 APE Vf 10 BGC0000837b
基因簇4 假定蛋白 260355 276839 - - -
基因簇5 糖苷水解酶家族68蛋白 742594 762939 - - -
基因簇6 膦酸酯 904827 946513 膦菊酯三肽 6 BGC0000406c
基因簇7 硬脂内酯 1504395 1525007 头孢菌素A 62 BGC0001897d
基因簇8 萜烯 1741712 1765811 - - -
基因簇9 细菌素 72239 83055 - - -
基因簇10 单位: UTP-葡萄糖-1-磷酸核苷酸基转移酶GalU 535180 578449 - - -
基因簇11 非核糖体合成酶 849707 935136 麝香草因A
94 BGC0001711e
基因簇12 芳基多烯 1000668 1045532 APE Vf 35 BGC0000837f
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拮抗黄曲霉的伯克霍尔德菌的筛选、鉴定及应用
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杨勇 1 , 于继光 1 , 沈文凤 2 , 于丽娜 2 , 宋昱 2 , 毕洁 2 , 高远 2 , 江晨 2 , 王明清 2, *
食品安全质量检测学报 | 食品分析与检测 2025,16(9): 240-247
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食品安全质量检测学报 | 食品分析与检测 2025, 16(9): 240-247
拮抗黄曲霉的伯克霍尔德菌的筛选、鉴定及应用
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杨勇1 , 于继光1, 沈文凤2, 于丽娜2, 宋昱2, 毕洁2, 高远2, 江晨2, 王明清2, *
作者信息
  • 1.费县农业技术推广中心, 临沂 273400
  • 2.山东省花生研究所, 青岛 266100
  • 杨勇(1973—), 男, 高级农艺师, 主要研究方向为农业技术推广。E-mail:

通讯作者:

* 王明清(1981—), 男, 博士, 副研究员, 主要研究方向为食品安全。E-mail:
Screening, identification and application of Burkholderia antagonizing Aspergillus flavus
Yong YANG1 , Ji-Guang YU1, Wen-Feng SHEN2, Li-Na YU2, Yu SONG2, Jie BI2, Yuan GAO2, Chen JIANG2, Ming-Qing WANG2, *
Affiliations
  • 1. Feixian Agricultural Technology Extension Center, Linyi 273400, China
  • 2. Shandong Peanut Research Institute, Qingdao 266100, China
出版时间: 2025-05-15 doi: 10.19812/j.cnki.jfsq11-5956/ts.20250114002
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目的 筛选一株能拮抗黄曲霉生长的菌株, 并进行菌株鉴定、应用研究和基因初步分析。方法 以费县花生地土壤的微生物为研究对象, 通过黄曲霉对峙试验筛选得到有效菌; 通过形态学观察和16S rRNA基因分析、鉴定确定有效菌种类; 黄曲霉孢子悬浮液侵染花生荚果和花生籽仁, 验证有效菌拮抗黄曲霉生长的效果; 分析菌株的基因组特征和次生代谢产物合成基因簇, 确定有效菌株的基本特性。结果 筛选获得能拮抗黄曲霉生长的有效菌株G22。通过形态学特征和基因同源性分析, 鉴定菌株G22为伯克霍尔德菌(Burkholderia latens), 同源性达99.93%, 命名为伯克霍尔德菌G22。有效菌株的发酵液对花生荚果和花生籽仁上黄曲霉的生长有一定拮抗作用。有效菌株的基因组有3个染色体和1个质粒, 次生代谢产物合成基因簇证明有效菌株有拮抗特性。结论 菌株G22对黄曲霉生长具有良好的拮抗作用。菌株G22的花生应用效果研究具有重要的实践意义, 为下一步开发黄曲霉的微生物菌剂奠定了基础。

黄曲霉  /  花生  /  拮抗菌  /  分离鉴定  /  伯克霍尔德菌

Objective To screen a strain that can antagonize the growth of Aspergillus flavus and to identify the strain, study its application and analysis its genetic preliminarily. Methods The microorganisms in the soil of peanut field in Feixian County were used as the research object, and the effective strains were obtained through the screening of Aspergillus flavus standoff test; the effective strains species were determined through morphological observation and 16S rRNA gene analysis and identification; the peanut pods and peanut kernels were infested with the suspension of Aspergillus flavus spores to validate the effective bacteria’s effect of antagonizing the growth of Aspergillus flavus; and the genome characteristics of the bacterial strains and the clusters of genes of secondary metabolites synthesis were analyzed to determine the basic characteristics of the effective bacterial strains. The genomic characteristics of the strain and the secondary metabolite synthesis gene cluster were analyzed to determine the basic characteristics of the effective strain. Results Effective strain G22, which could antagonize the growth of Aspergillus flavus, was obtained by screening. The strain G22 was identified as Burkholderia latens with 99.93% homology and named Burkholderia latens G22 by morphological characterization and gene homology analysis. The fermentation broth of the effective strain had a certain antagonistic effect on the growth of Aspergillus flavus on peanut pods and peanut seed kernels. The genome of the effective strain had 3 chromosomes and 1 plasmid, and the secondary metabolite synthesis gene cluster proved that the effective strain had antagonistic properties. Conclusion Strain G22 has good antagonistic effect on the growth of Aspergillus flavus. The application effect of strain G22 in peanut has important research significance in practice, which will lay a foundation for the further development of microbial fungicides for Aspergillus flavus.

Aspergillus flavus  /  peanut  /  antagonism  /  isolation and identification  /  Burkholderia
杨勇, 于继光, 沈文凤, 于丽娜, 宋昱, 毕洁, 高远, 江晨, 王明清. 拮抗黄曲霉的伯克霍尔德菌的筛选、鉴定及应用. 食品安全质量检测学报, 2025 , 16 (9) : 240 -247 . DOI: 10.19812/j.cnki.jfsq11-5956/ts.20250114002
Yong YANG, Ji-Guang YU, Wen-Feng SHEN, Li-Na YU, Yu SONG, Jie BI, Yuan GAO, Chen JIANG, Ming-Qing WANG. Screening, identification and application of Burkholderia antagonizing Aspergillus flavus[J]. Journal of Food Safety & Quality, 2025 , 16 (9) : 240 -247 . DOI: 10.19812/j.cnki.jfsq11-5956/ts.20250114002
黄曲霉(Aspergillus flavus)侵染花生、玉米等农作物, 并产生次生代谢产物黄曲霉毒素[1]。黄曲霉毒素有剧毒性, 能致畸致癌, 如果长期食用会严重威胁身体健康甚至死亡[2-3]。据联合国粮农组织估计, 全球每年超四分之一的谷物遭受黄曲霉毒素的污染, 导致高达数千亿美元的损失[4]。因此, 黄曲霉和黄曲霉毒素的危害必须要引起重视, 其防治工作仍然是一个亟需解决的难题。目前, 粮食与食品中的黄曲霉及其毒素防治办法通常有物理、化学和生物法, 物理法主要是通过控制黄曲霉菌的生长环境达到防治效果; 化学法主要是通过化学防霉剂处理产品达到防治效果; 生物法主要是通过生物间或者产生活性物质抑制黄曲霉达到防治效果。物理和化学法防治黄曲霉菌成本高、效率低, 同时还会残留有害物质以及破坏产品的营养成分[5], 所以, 生物法因其更安全被认为是最有效和最有前途的方法[6]
前期研究发现假单胞菌、扁座壳孢、木霉菌、乳杆菌、芽孢杆菌等多种有效拮抗黄曲霉的菌株。DEY等[7]从花生的根际分离出一株对黄曲霉有良好防治效果的假单胞菌; 潘洁茹等[8]从柑桔园分离到一株座壳孢菌, 通过分析其分生孢子、侧丝和子座形态等鉴定出是一株扁座壳孢菌, 其胞外代谢产物抑菌圈直径达17 mm, 能明显抑制黄曲霉菌生长; 张丽芳等[9]从山东、河南、江苏、山西等地区的玉米中筛选到7株对黄曲霉菌有抑制作用的木霉菌, 其中一株哈茨木霉的发酵产物和蛋白提取物对黄曲霉生长有较强抑制能力, 可开发为微生物制剂应用; 巩海强等[10]从玉米青贮饲料筛选出了对黄曲霉有明显抑制作用的革兰氏阳性乳酸菌, 抑菌圈直径大于3.60 cm; 李俊峰等[11]发现一株通过产生拮抗蛋白而抑制黄曲霉生长的空气芽孢杆菌; 郑爱芳等[12]从农田土壤中筛选出一株贝莱斯芽孢杆菌, 除了能拮抗黄曲霉外, 还能对多种微生物有抑制作用, 能预防花生贮藏过程中的真菌侵染, 还能防治植物微生物病害; 其他研究也都分离到了枯草芽孢杆菌[13-15]。然而目前关于伯克霍尔德氏菌拮抗黄曲霉菌的报道较少。本研究从费县花生地分离纯化出能抑制黄曲霉生长的伯克霍尔德氏菌, 并进行了应用效果研究, 初步分析了其基因组特征, 并挖掘了拮抗黄曲霉的次级代谢产物, 为下一步开发黄曲霉的微生物菌剂奠定了基础。
有效菌株G22由费县花生地土壤中分离、筛选得到。黄曲霉标准菌株3357由山东省花生研究所保藏。在费县花生地随机取土壤样品12份, 取样深度为0~5 cm, 于4 ℃冰箱冷藏备用。
DNA试剂盒(天根生物技术公司); Super GelRed荧光染料(美国Everbright Inc公司); 琼脂粉、琼脂糖(北京索莱宝科技有限公司); LB肉汤粉(北京陆桥技术有限公司); 马铃薯葡萄糖琼脂(potato dextrose agar, PDA, 青岛海博生物技术有限公司)。
HR30-IIA2生物安全柜(青岛海尔生物医疗股份有限公司); IX73P+DP80倒置荧光显微镜(日本OLYMPUS公司); IS-RDV1立式恒温培养箱(德国CRYSTAL公司); GI36T高压蒸气灭菌器[致微(厦门)仪器有限公司]; S1000TM Thermal Cycler聚合酶链反应(polymerase chain reaction, PCR)仪(美国BIO-RAD公司); 5418离心机(德国Eppendorf公司); BCE124-1CCN电子天平[赛多利斯科学仪器(北京)有限公司]。
取费县花生地土壤样品1 g于9 mL无菌水中, 搅拌10 min, 吸取100 μL涂布于LB平板, 放置于培养箱中28 ℃培养2 d后观察菌落的长势。标记平板上的各菌落, 继续重复纯化5代, 在-80 ℃保存。将筛选出的各菌株在LB液体培养基28 ℃孵育24 h, 得到各菌株发酵液, 将各菌株发酵液分别与黄曲霉对峙培养, 观察其生长状况。
上述筛选出的有效菌株在LB固体培养基28 ℃孵育24 h, 观察记录有效菌菌落形态特征。
将菌株G22接种于液体LB中, 150 r/min 28 ℃恒温培养24 h得到发酵液。采用天根DNA试剂盒提取菌株G22基因组DNA。引物为27F、1429R[16]。PCR反应体系25 μL, Taq buffer 2.5 μL, dNTPs 2 μL, Taq聚合酶0.2 μL, 引物27F及1492R各1 μL, G22菌株基因组模板1 μL, ddH2O 17.3 μL。PCR扩增程序95 ℃预变性10 min; 95 ℃变性40 s, 55 ℃退火40 s, 72 ℃延伸100 s, 循环30个; 72 ℃延伸10 min。反应结束后, 3 μL PCR产物上样于1%琼脂糖凝胶(Super GelRed荧光染色试剂染色), 100 V电压电泳30 min, 凝胶成像系统检测结果得到清晰的目的条带PCR产物进行回收。根据说明书将PCR产物连接到TAKARA的pMD19-T载体; 该反应体系10 μL, 其中pMD19-T载体1 μL, PCR产物1 μL, 水3 μL, Soultion I 5 μL; 该体系在16 ℃反应30 min。构建的重组质粒转化到大肠杆菌DH5α感受态细胞中, 测序得到的基因序列进行线上比对分析, 通过CLUSTALW进行多重数据比对后, 用MEGA X[17]构建16S rRNA基因序列的系统发生树。
挑选完好无损的同品种花生荚果[18], 花生荚果表面用1%次氯酸钠溶液消毒, 无菌水冲洗3次, 无菌条件下于三角瓶中接种4×106 CFU/mL黄曲霉孢子悬浮液0.4 mL及菌株G22发酵液0.4 mL。接种后于28 ℃孵育7 d, 观察比较花生荚果的长菌情况。对照组用无菌水代替菌株G22发酵液, 每个平行重复3次。
用70%酒精对花生籽仁消毒后无菌水冲洗3次(20 min内完成整个过程)。无菌培养皿放入花生籽仁8粒, 接种4×106 CFU/mL黄曲霉孢子悬菌液0.4 mL及菌株G22发酵液0.4 mL。接种后于28 ℃孵育7 d, 观察比较花生籽仁的长菌情况。对照组用无菌水代替菌株G22发酵液, 每个平行重复3次。
前期研究发现很多生防菌通过次级代谢产物抑制真菌的生长[19], 本研究通过细菌基因组学分析, 研究该菌的次级代谢产物的基因。根据细菌DNA提取试剂盒说明书进行有效菌株G22基因组的DNA提取。纯化的菌株G22基因组DNA进行定量, 高质量的DNA被用来后面的建库测序。使用PacBio Sequel IIe和illumina测序仪(NovaSeq6000)进行菌株G22全基因组测序。生物信息学采用PacBio Sequel IIe、Illumina测序平台上生成的数据进行分析。此过程中所有的分析皆在 http://cloud.majorbio.com(上海美吉生物云平台)上进行。利用Prodigal v2.6.3[20]对菌株G22基因组中的编码序列进行预测, 质粒基因采用GeneMarkS[21]软件预测, tRNAscan-SE v2.0[22]进行tRNA预测, Barrnap v0.9 (https://github.com/tseemann/barrnap)进行rRNA预测。采用Diamond、BLASTP、HMMER等序列比对工具, 从Pfam、NR、CAZY、Swiss-Prot、GO、KEGG、COG等数据库中对预测到的编码序列进行功能注释, 通过antiSMASH v5.1.2预测菌株G22次级代谢产物合成基因簇。
本研究筛选到102株细菌, 将分离得到的菌株分别与黄曲霉菌进行对峙实验, 得到能拮抗黄曲霉的菌株12株, 分别为菌株G6、G10、G12、G14、G22、G40、G63、G67、G82、G86、G95、G100。对峙结果如图1所示, 其中菌株G22对峙效果最明显, 菌株LE160和菌株G44分别为阳性对照和阴性对照。菌株的菌落呈圆形乳黄色半透明状(图2), 直径为1~2 mm。菌种分类的重要指标之一就是16S rRNA序列的同源性。将该序列在ezbiocloud数据库中比对后发现, 有效菌株G22与Burkholderia latens R-5630(T)亲缘关系最近, 同源性达99.93%, 属于伯克霍尔德菌(Burkholderia latens), 命名为伯克霍尔德菌G22。选取相近的17个菌, 将其同源序列构建进化树(图3)。
为进一步验证菌株G22在花生籽仁中对黄曲霉菌的抑制作用, 人工接种两种菌株后的生长情况如图4B所示, 对照组中黄曲霉生长粒数和黄曲霉覆盖率都比实验组多; 实验组只有3粒花生籽仁被侵染, 并且覆盖率较小。由此可见, 菌株G22发酵液对黄曲霉菌生长有抑制作用。
黄曲霉和菌株G22发酵液接种到花生荚果后的生长情况表现出明显的不同, 如图4A所示。对照组的花生荚果均有明显的黄曲霉生长, 接种菌株G22实验组的花生荚壳未见明显的黄曲霉生长。说明菌株G22发酵液对黄曲霉生长有抑制效果, 菌株G22能有效拮抗黄曲霉的生长。
本研究中的有效菌G22经DNA焦磷酸测序总共产生了94839个读数, 相当于162.7倍的基因组覆盖率, 鸟嘌呤胞嘧啶(guanine cytosine, GC)含量为67.03%。有效菌G22基因组由3条分别为3245674、2254594、1184400 bp的环状染色体和1条173826 bp的质粒组成(图5), GenBank登录号分别为CP185919、CP185920、CP185921、CP185922, 总计6.86 Mbp。1号染色体、2号染色体和3号染色体分别编码了3189、2293和1127个预测开放阅读框, 质粒中则有179个开放阅读框。1号染色体上有2706个已知开放阅读框, 338个假定开放阅读框, 145个未知开放阅读框, 60个tRNA, 12个rRNA操作子, 13个基因岛。2号染色体上有1746个已知开放阅读框、381个假定开放阅读框、166个未知开放阅读框、4个tRNA、3个rRNA操作子、2个基因岛。3号染色体上有918个已知开放阅读框、118个假定开放阅读框、91个未知开放阅读框、2个tRNA、3个rRNA操作子、6个基因岛。在质粒中, 发现了105个已知开放阅读框、68个假定开放阅读框、6个未知开放阅读框、0个tRNA、0个rRNA操作子、1个基因岛。
用蛋白质的直系同源簇功能注释创建了圆形基因组图谱。图谱的最外圈是基因组的大小标识; 第2、3圈分别是+链和-链上预测的蛋白质编码基因, 其中不同的颜色代表了不同的直系同源簇功能分类; 第4圈, tRNA和rRNA; 圈5为GC含量, 向外的红色部分表示该区域GC的含量比全基因组平均GC含量高, 向内的蓝色部分表示该区域GC含量全基因组平均GC含量低; 图谱的最内圈为GC-Skew值, 具体算法为G-C/G+C, 可以辅助判断前导链和后滞链, 一般前导链GC skew>0, 后滞链GC skew<0, 也可辅助判断复制起点(累计偏移最小值)与终点(累计偏移最大值)。
利用anti-SMASH预测了菌株G22基因组中的次生代谢物生物合成基因簇[23]。总共鉴定出12个这样的簇, 包括2个非核糖体合成酶、2个萜烯类、2个芳基多烯类、1个假定蛋白、1个糖苷水解酶家族68蛋白、1个膦酸酯、1个硬脂内酯、1个细菌素和UTP-葡萄糖-1-磷酸核苷酸基转移酶GalU, 如表1所示。这些基因簇由核心生物合成基因、转运相关基因、调控基因、附加生物合成基因和其他基因组成。其中, 基因簇11与火氏伯克霍尔德菌(Burkholderia pyrrocinia) Lyc2的麝香草因A生物合成基因簇的氨基酸相似度为94%。基因簇1与洋葱伯克霍尔德菌(Burkholderia cepacia) 89的鸟苷生物合成基因簇有93%的氨基酸相似性。基因簇7与双向伯克霍尔德氏菌(Burkholderia ambifaria)IOP40-10的头孢菌素A生物合成基因簇有62%的氨基酸相似性。基因簇12与弗氏阿里弧菌(Aliivibrio fischeri) ES11的APE Vf生物合成基因簇的氨基酸相似度为35%。基因簇3与费氏阿利弧菌(Aliivibrio fischeri) ES114的APE Vf生物合成基因簇有10%的氨基酸相似性。基因簇6与病毒色链霉菌(Streptomyces viridochromogenes) Tü494中的膦菊酯三肽生物合成基因簇有6%的氨基酸相似性。
花生含有的营养物质丰富, 在食用油和休闲食品方面占有重要的地位[24-25]。但花生等农作物易受黄曲霉污染, 每年有大量花生在收获或贮藏过程中被侵染, 损失严重[26]。因此, 寻找能有效拮抗黄曲霉的微生物意义重大。从筛选自身能拮抗黄曲霉的花生品种[27-28]到筛选能拮抗黄曲霉生长的微生物[29-30], 研究学者已对花生受黄曲霉污染问题做过很多研究, 据报道, 不同的微生物及其代谢产物能有效抑制黄曲霉生长。徐杨玉等[31]发现绿色木霉的发酵液对黄曲霉菌有抑制作用, 大田试验发现其发酵液能抑制土壤中黄曲霉菌的生长。杜立武等[32]从玉米中分离出一株解淀粉芽孢杆菌, 对黄曲霉菌丝的生长有抑制作用。宫安东[33]等分离了吡咯伯克霍尔德菌, 能通过产生的挥发性物质二甲基二硫有效抑制黄曲霉生长。本研究中筛选到一株伯克霍尔德氏菌对拮抗黄曲霉生长的效果明显, 并且进行了应用研究。研究表明伯克霍尔德氏菌G22发酵液作用在花生荚果和花生籽仁上都有明显的抑制黄曲霉生长的作用。
伯克霍尔德氏菌属(Burkholderia), 具有丰富的代谢多样性和较强的适应能力[34], 能抑制植物病菌生长, 被开发为生物防治剂[35-36]。伯克霍尔德氏菌基因组比较大, 通常位于细菌前5%, 平均约为7.5 Mb。大部分伯克霍尔德氏菌的种属有2条染色体、0~6个质粒[37]。本研究中的菌株G22有3个染色体和1个质粒, 表明该菌和其他伯克霍尔德氏菌有着明显的不同。
随着基因组测序技术的发展, 很多种伯克霍尔德菌的基因组序列已经公布于数据库, 研究表明, 伯克霍尔德氏菌能产生复杂的次级代谢产物, 包括抗生素类、非核苷酸多肽类等天然活性物质[38], 其中产生的硝吡咯菌素、吩嗪、苯基吡咯和Cepaciamide A等次生代谢物质具有抑菌活性, 能破坏细胞生成能量或抑制细胞代谢物合成等[39]。DELOS等[40]研究的伯克霍尔德菌anthina XXVI能有效抑制芒果炭疽鼻病原炭疽杆菌(Colletotrichum gloeosporioides), 这可能是由于包括异羟肟酸盐类铁载体的次生代谢物产生的作用。本研究中的有效菌G22基因组中含有抑制真菌的环脂肽occidiofungin生物合成基因簇同源的基因簇, 有94%的相似性; 同时, 与伯克霍尔德菌活性抗菌肽的合成关系密切的非核糖体合成酶在有效菌G22的基因组中也被预测到, 由此说明有效菌G22有拮抗特性[41]
综上所述, 菌株G22具有显著的拮抗黄曲霉生长的特征, 经鉴定是一株伯克霍尔德菌(Burkholderia latens), 初步分析了其基因组特征, 并挖掘了拮抗黄曲霉的次级代谢产物, 为下一步开发黄曲霉的微生物菌剂奠定基础。
  • 山东省重点研发计划项目(2023TZXD074)
  • 科技特派员科技服务乡村振兴典型案例(新技术新品种、新模式)推广应用项目(2022DXAL0102)
  • 山东省农业科学院农业科技创新工程项目(CXGC2025B06)
  • 2024年度牟平区科技创新发展专项
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2025年第16卷第9期
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doi: 10.19812/j.cnki.jfsq11-5956/ts.20250114002
  • 接收时间:2025-01-14
  • 首发时间:2025-07-17
  • 出版时间:2025-05-15
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  • 收稿日期:2025-01-14
基金
山东省重点研发计划项目(2023TZXD074)
科技特派员科技服务乡村振兴典型案例(新技术新品种、新模式)推广应用项目(2022DXAL0102)
山东省农业科学院农业科技创新工程项目(CXGC2025B06)
2024年度牟平区科技创新发展专项
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    1.费县农业技术推广中心, 临沂 273400
    2.山东省花生研究所, 青岛 266100

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* 王明清(1981—), 男, 博士, 副研究员, 主要研究方向为食品安全。E-mail:
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2种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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