Research

Research ›› 2023, Vol. 6 ›› Issue (6) : 0179 - . DOI: 10.34133/research.0179

Research Article

Dear-DIA^XMBD: Deep Autoencoder Enables Deconvolution of Data-Independent Acquisition Proteomics

Qingzu He ¹^,² ,
Chuan-Qi Zhong ³^,⁴ ,
Xiang Li ¹^,⁴ ,
Huan Guo ¹ ,
Yiming Li ¹ ,
Mingxuan Gao ⁵ ,
Rongshan Yu ⁵^,⁶ ,
Xianming Liu ⁷ ,
Fangfei Zhang ⁸^,⁹ ,
Donghui Guo ¹¹ ,
Fangfu Ye ² ,
Tiannan Guo ⁸^,⁹^,¹⁰ ,
Jianwei Shuai ²^,¹^,⁴^,⁶^,^* ,
Jiahuai Han ³^,⁴^,⁶^,^*

Author information +

¹Department of Physics, and Fujian Provincial Key Laboratory for Soft Functional Materials Research, Xiamen University, Xiamen 361005, China.

²Oujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health) and Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang 325001, China.

³School of Life Sciences, Xiamen University, Xiamen 361102, China.

⁴State Key Laboratory of Cellular Stress Biology, Innovation Center for Cell Signaling Network, Xiamen 361102, China.

⁵Department of Computer Science, Xiamen University, Xiamen 361005, China.

⁶National Institute for Data Science in Health and Medicine, School of Medicine, Xiamen University, Xiamen 361102, China.

⁷Bruker (Beijing) Scientific Technology Co. Ltd., Beijing, China.

⁸Westlake Laboratory of Life Sciences and Biomedicine, Key Laboratory of Structural Biology of Zhejiang Province, School of Life Sciences, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.

⁹Institute of Basic Medical Sciences, Westlake Institute for Advanced Study, 18 Shilongshan Road, Hangzhou 310024, China.

¹⁰Westlake Omics Ltd., Yunmeng Road 1, Hangzhou, China.

¹¹Department of Electronic Engineering, Xiamen University, Xiamen 361005, China.

^* Address correspondence to: jianweishuai@xmu.edu.cn (J.S.)

jhan@xmu.edu.cn (J.H.)

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Received	Accepted	Published
2022-12-08	2023-06-01
Issue Date
2026-10-28

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