| Garlic | A. sativum L. | Colitis | Anticolitic B. thetaiotaomicron↑, TNF-α and IL-6↓; TLR4/MyD88/NF-κB pathway↓, proinflammatory cytokines↓, Lachnospiraceae↑, Helicobacter↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Peu-MIR2916-p3; han-miR-3630-5p | ig | [73–75] |
| Melanoma | γδ T cells↑, IFN-γ, CXCR3↑ | Differential centrifugation | Allicin | ig | [96] |
| Psoriasis | NRF2 pathway↑, IL-17↓, NF-κB signaling pathway↓, TNF-α, IL-6, and IL-1β↓ | Differential centrifugation coupled to PEG precipitation | Quercetin and allicin | Hydrogel-based topical delivery | [35] |
| Type 2 diabetes | OmpH gene expression↑, Akkermansia muciniphila OMVs↑, Amuc-1100, P9, and phosphatidylcholines↑, GLP-1↑, cGAS- and STING-mediated inflammation↓, IL-1β, IFN-γ, and TNF-α↓ | Differential ultracentrifugation and filtration | Phosphatidic acid | ig | [93,94] |
| High-fat-diet-induced obesity | c-Myc-dependent STING signaling↓, LPS-induced proinflammatory cytokines↓, IL-10↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Polyphenols and flavonoids | ig | [101] |
| A. vera | A. vera (L.) Burm. f. | Colitis | NO and TNF-α↓, p-NF-κB and p- IκB↓, TJ and AJ proteins↑ | Differential ultracentrifugation and filtration | - | ig | [77] |
| Aging | Nrf2 nuclear translocation↑, β-Gal and SASP↓ | Differential centrifugation and ultracentrifugation | Aloenin A, aloenin B, aloin, and aloe-emodin, analogs of the 14-3-3ζ protein family | Topical application with a microneedle roller | [86] |
| Ginger rhizomes | Z. officinale Roscoe | Alcoholic liver injury | Activating Nrf2 via the TLR4/TRIF pathway, up-regulating hepatic detoxification and antioxidant gene expression, and inhibiting reactive oxygen species production | Ultracentrifugation | – | ig | [68] |
| Alcoholic liver injury | TLR4/TRIF pathway↑, Nrf2↑, HO-1, NQO1, GCLM, and GCLC↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Shogaol | ig | [34] |
| Periodontitis | TNF-α, IL-1α, IL-1β, IFN-γ, IL-6, and IL-13↓; Rgp and Kgp↓; Porphyromonas gingivalis activity↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Lipid PA (34:2) | ig | [138] |
| Triple-negative breast cancer | ROS↑, mitochondrial dysfunction↑, MDA-MB-231 cells apoptosis↑ | Differential ultracentrifugation and filtration | – | In vitro | [99] |
| Pulmonary infection | NF-κB↓, Nsp12 and spike genes↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | miRNA aly-miR-396a-5p and rlcv-miR-rL1-28-3p | Direct intratracheal injection | [89] |
| Herba houttuyniae | H. cordata Thunb. | Colitis | NLRP3/NOD-like receptor signaling pathway↓ IL-6, TNF-α, IL-17, and IL-23↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Luteolin | ig | [71] |
| Pulmonary infection | AKT1 and MAPK3 expression↓ | Ultracentrifugation | miR-168a-3p, miR-168b-3p, miR-8175, and novel_mir2 | In vitro | [92] |
| Honeysuckle | Lonicera japonica Thunb. | Cervical cancer | SiHa, CaSki, and HeLa cells↓, E6/E7-p53/caspase-3 axis↑, cell apoptosis↑ | Ultracentrifugation | miR-2911 | In vitro | [102] |
| Pulmonary infection | H1N1 viral replication↓, PB2 and NS1 protein expression↓ | Differential centrifugation method | miR-NA2911 | ig | [90] |
| Ginseng | P. ginseng C. A. Mey. | Drug-induced cardiotoxicity | MAPK signaling pathway↓, cTnT, CK, and LDH↓, ROS↓, cell apoptosis↓ | A combination of ultracentrifugation and sucrose gradient centrifugation techniques | – | ip | [65] |
| Inflammatory bowel disease | TLR4/MAPK and p62/Keap1/Nrf2 pathways↑, Wnt/β-catenin signaling pathway↑, TNF-ɑ, IL-6, and IL-10↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Phosphatidic acid | ig | [78] |
| Melanoma | TLR4 and MyD88-mediated signaling↑, M1 macrophage polarization↑, IL-6, CCL5, and TNF-α↑; CD8+ T cells↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Ceramide lipids and proteins | ip; iv | [7,8] |
| Glioma | M1 macrophage polarization↑, CD8+ T cells↑, CD4+ T cells↓, Tregs↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Ptc-miR-396f | iv | [19] |
| Aging | HMGB1 expression↑, MMP1 and IL-8↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Diacylglycerols, phosphatidylcholine, phosphatidylethanolamine, lysophosphatidylcholine, and sphingomyelin | In vitro | [82] |
| Metabolic disease of bone | Bone-marrow-derived macrophages↑, RANKL-induced activation of IκBα, JNK, and ERK signaling pathways↓ | Centrifugation with a sucrose gradient | Rb1 and Rg1 ginsenosides | sc | [81] |
| R. glutinosa | R. glutinosa (Gaertn.) Libosch. ex Fisch. and C. A. Mey. | Acute lung injury | NO, ROS, IL-6, IL-1β, and TNF-α↓, M2 macrophage polarization↑, GPR161↓, LPS-induced inflammation↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Rgl-exomiR-7972 | iv | [37] |
| Shiitake mushroom | Lentinula edodes | Acute liver injury | NLRP3↓, IL-6, IL-1β, and IL-18↓ | Differential centrifugation method | – | ip | [79] |
| Pulmonary infection | Specifically binding to viral surface glycans, SARS-CoV-2 infection↓ | Differential centrifugation method | Shictin-CBD protein | In vitro | [91] |
| A. annua | Artemisia caruifolia Buch.-Ham. ex Roxb. | Lung cancer | cGAS–STING pathway↑, M1 macrophage polarization↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | mtDN/A | ip, iv, sc, and it | [97] |
| Turmeric | C. longa L. | Ulcerative colitis | M2 macrophage polarization↑, IL-1β, MCP-1, TNF-α, and IL-6↓, IL-10↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | – | ig | [17] |
| Licorice | Glycyrrhiza uralensis Fisch. | Lymphoma | IFN-γ↑, antigen-specific CD8+ T cells↑ | Ultracentrifugation and alcohol precipitation | – | sc | [98] |
| Hemp seed | Cannabis sativa L. | Androgenetic alopecia | Wnt/β-catenin and Sonic Hedgehog signaling↑, PTCH1↑ androgen receptor expression↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | – | Chicken embryo injection | [85] |
| Lavender | Lavandula angustifolia Mill. | Skin photoaging | MMP-1, MMP-3, IL-1β, IL-6, and TNF-α↑ matrix metalloproteinases↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Cpa-miR-166e and zma-miR-166h-3p | Topical application | [88] |
| Maca | L. meyenii Walp. | Depression | 5-HT↑, GTP–Cdc42/ERK signaling pathway↑, TrkB/AKT pathway↑, brain-derived neurotrophic factor↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Macamides | iv | [63] |
| Bitter gourd | M. charantia L. | Drug-induced cardiotoxicity | p62 ubiquitination/degradation↓, Nrf2 nuclear translocation and HO-1 expression↑, cardiomyocytes apoptosis↓ | Differential ultracentrifugation and filtration | – | iv | [66] |
| Black mulberry | M. nigra L. | Liver cancer | ROS↑ BUN, AST, TBA, and ALT↓; intestinal microbiota↑, probiotics↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Galactose end group-contained glycolipids | ig | [103] |
| Mulberry | Morus alba L. | Colitis | AhR/COPS8 signaling pathway↑, IL-6 and IL-1β↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | MBELN-derived protein HSPA8 | ig | [72] |
| Notoginseng root | P. notoginseng (Burkill) F. H. Chen ex C. H. Chow | Cerebral ischemia | PI3K/Akt pathway↑, M2 macrophage polarization↑, TNF-α and IL-6↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Unsaturated lipids, PNS, stu-miR-156f-5p | Tail vein injection | [64] |
| Purple perilla | P. frutescens (L.) Britt. | Psoriasis | IL-17 pathway↓, ROS↓, IL-6, TNF-α, and IL-1β↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Pab-miR-396a-5p | Topical administration | [84] |
| P. linteus | P. linteus | Aging | Mical2 expression↓, COL1A2↑, MMP1↓, ROS, malondialdehyde, and SA-β-Gal↓ | Differential ultracentrifuge | miR-CM1 | Topical administration | [87] |
| P. cocos | P. cocos (Schw.) wolf | Metabolic associated fatty liver disease | PINK1/Parkin-mediated mitophagy↑, NLRP3 activation↓, TNF-α, IL-6, IL-1β, and IL-18↓ | Differential ultracentrifugation and filtration | Unsaturated lipids, PNS, stu-miR-156f-5p | ip | [80] |
| Purslane | Portulaca oleracea L. | Colitis | TNF-α, IL-6, IL-12, and IL-1β↓, IL-10↑, Lactobacillus reuteri↑, aryl-hydrocarbon receptor↑, DP CD4+CD8+ T cell↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | – | ig | [76] |
| Lobed kudzuvine root | Puerariae lobatae radix | Osteoporosis | TMAO degradation↑, autophagy↑, hBMSCs differentiation↑ | Differential ultracentrifugation and filtration | Puerarin | ip | [57] |
| S. miltiorrhiza | S. miltiorrhiza Bunge | Diabetic cardiomyopathy | NEDD4 expression↑, ubiquitination and degradation of SGK1↑, NLRP3 inflammasome-triggered macrophage pyroptosis↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | Tanshinone IIA | Tail vein injection | [95] |
| Tomato | S. lycopersicum L. | Restenosis after vascular injury | Utilizing miRNA164a/b-5p inhibit VSMCs proliferation/migration/phenotypic transition then suppress neointimal hyperplasia Keap1 mRNA expression↓, Nrf2 nuclear translocation↑, VSMCs proliferation, migration, and phenotypic transformation↓ | Differential centrifugation and sucrose density gradient ultracentrifugation | miRNA164a/b-5p | ig | [67] |
| Mongolian dandelion | T. mongolicum Hand.-Mazz. | Skin wound | TNF-α, IL-6, and IL- 1β↓, IL-10 and VEGF↑, M2 polarization↑, wound closure↑ | Differential ultracentrifugation and filtration | – | sc | [83] |
| Tea leaf | Camellia sinensis | Breast cancer | ROS, SA, and NO↑, mitochondrial damage↑, ROS↑, NOS2, CCL4, CXCL9, IL-10↑, DNA replication↓, beneficial bacteria↑ | Differential centrifugation and sucrose density gradient ultracentrifugation | Polyphenols and flavonoids | iv and ig | [100,101] |