To further validate the role of ApoE in depression-like behaviors, we employed an AAV-mediated short hairpin RNA (shRNA) strategy on C57BL/6J mice. We knocked down the ApoE expression in the bilateral hippocampus of 6-week-old mice (Fig.
3A). The precise localization of the AAV within the target brain region, along with the efficacy of ApoE gene silencing, was meticulously validated through immunofluorescence labeling, quantitative real-time polymerase chain reaction (qPCR) analysis, and western blot protein assays (Fig.
3B to D). Subsequent behavioral assessments revealed that ApoE-KD mice showed significantly increased immobility durations in the TST and FST. Additionally, these mice showed a significant decrease in the sucrose preference rate during the SPT (Fig.
3E). Notably, the running distance and time in the center of the OFT were not different from those of ApoE-KD mice (Fig.
3F), indicating that hippocampal ApoE knockdown selectively induced depression-like behaviors without affecting anxiety-like behaviors. To investigate the potential role of ApoE in depression, we performed RNA sequencing (RNA-seq) analysis on hippocampal tissues from both the Ctrl-shRNA and ApoE-KD groups. RNA-seq analysis revealed that hippocampal genes down-regulated following ApoE knockdown were significantly enriched in synaptic functions, particularly postsynaptic processes (Fig.
4A to C). These findings strongly suggest that hippocampus-specific ApoE knockdown results in synaptic dysfunction. Subsequently, we employed a slice patch clamp to record miniature excitatory postsynaptic current (mEPSC) and miniature inhibitory postsynaptic current (mIPSC) in CA1 pyramidal neurons. Notably, the amplitude of mIPSC was significantly decreased in the ApoE-KD group compared to that in the Ctrl-shRNA group (Fig.
4D and E). We further investigated the protein expression levels of excitatory (GluR2 and NMDAR2B) and inhibitory (GABA
AR α1 subunit) postsynaptic receptors. In line with the mEPSC and mIPSC results, no significant changes were observed in the protein levels of excitatory receptors following hippocampal ApoE knockdown. In contrast, the protein level of GABA
AR α1 subunit was significantly reduced (Fig.
4F). Additionally, enzyme-linked immunosorbent assay (ELISA) analysis revealed no significant differences in the levels of glutamate (Glu) and GABA in the hippocampus between the Ctrl-shRNA and ApoE-KD groups (Fig.
4H). Previous studies have indicated that the expression of GABA
AR α1 is regulated by KCC2, a protein that governs the intracellular Cl
− gradient and facilitates GABAergic inhibition [
31]. We quantified the mRNA and protein levels of KCC2 and observed a significant reduction in KCC2 protein levels after ApoE knockdown, while the mRNA levels remained unaltered (Fig.
4F and G). This result suggests that ApoE deficiency down-regulates KCC2 levels posttranscriptionally. ApoE has been shown to modulate downstream synaptic activity via ApoE-receptor-mediated pathways in neurons [
8,
9]. Given that both KCC2 and ApoE receptors are localized on the neuronal membrane surface, we investigated the expression levels of ApoE receptors. Western blot results showed a significant reduction in the levels of ApoE receptors, including LDLR and LRP1, following ApoE knockdown (Fig.
4F). Notably, reduced expression levels of KCC2, GABA
AR α1, LDLR, and LRP1 were also detected in the hippocampus of Sus group mice (Fig.
S1A). Collectively, these findings demonstrate that ApoE knockdown results in impaired GABAergic synaptic function and pronounced depression-like behaviors, which highlights the pivotal role of ApoE in regulating hippocampus-associated behaviors.