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Identification of CBF Gene Family in Cashew and Its Expression Pattern in Response to Cold Stress
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Hengjiu CUI1, 2, 3, 4, Jiaoke ZENG1, 4, Wen LI1, 4, Haijie HUANG5, 6, Shiqing PENG2, 3, Dong GUO2, 3, Jinji PU2, 3, Yongkai ZHOU2, 3, Huiliang LI2, 3, *
Chinese Journal of Tropical Crops | 2024, 45(3) : 473 - 480
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Chinese Journal of Tropical Crops | 2024, 45(3): 473-480
Omics & Biotechnology
Identification of CBF Gene Family in Cashew and Its Expression Pattern in Response to Cold Stress
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Hengjiu CUI1, 2, 3, 4, Jiaoke ZENG1, 4, Wen LI1, 4, Haijie HUANG5, 6, Shiqing PENG2, 3, Dong GUO2, 3, Jinji PU2, 3, Yongkai ZHOU2, 3, Huiliang LI2, 3, *
Affiliations
  • 1.College of Horticulture, Hainan University, Haikou, Hainan 570228, China
  • 2.Hainan Academy of Tropical Agricultural Resources, Haikou, Hainan 571101, China
  • 3.Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan 571101, China
  • 4.Key Laboratory for Quality Regulation of Tropical Horticultural Crops of Hainan Province, Haikou, Hainan 570228, China
  • 5.Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan 571101, China
  • 6.National Cultivar Improvement Center of Tropical Fruit Tree, Haikou, Hainan 571101, China
Published: 2024-03-25 doi: 10.3969/j.issn.1000-2561.2024.03.004
Outline
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Anacardium occidentalie Linn is a typical tropical fruit tree, which is mainly planted in Yunnan and Hainan provinces of China. Cashew cultivation has important economic, social and ecological values. It is of great value to realize realize the strategy of rural revitalization in China, increase farmers' production and income, and achieve common prosperity. Cashews are very sensitive to low temperatures, and they will be severely damaged at 8 ℃and the growth will stop. Therefore, lowtemperature stress is an important abiotic stress that restricts cashew growth. CBF transcription factors play important roles in plant response to abiotic stresses such as low temperature, drought and salt. However, the role of CBF gene family in cashews has not been elucidated, and the expression pattern of this family in response to low temperature stress is unknown. In this study, in order to explore the basic characteristics of the CBF gene family in cashew nuts, six AoCBF gene family transcription factors were identified and obtained from the cashew transcriptome by bioinformatics methods, and the physical and chemical properties, protein structure, phylogeny, promoter action elements and expression patterns under low temperature induction were analyzed. The length of the six AoCBF proteins ranged from 189 to 334 aa, and the molecular weight of the proteins ranged from 21.31 to 37.89 kDa. The isoelectric points of the six AoCBF proteins were less than 7, indicating that the proteins were acidic. The proteins all contained an AP2/ERF domain. Motif analysis showed that there were five motifs in AoCBF genes, and the absence of different AoCBF gene motifs implied the absence of related functions. Phylogenetic tree analysis showed that the six AoCBF genes could be divided into two subgroups, A and B, in which group A contained one gene and group B only contained five genes. The analysis of homeotropic elements of promoter showed that AoCBF gene might be involved in the response to hormone and abiotic stress. Fluorescence quantitative expression analysis showed that all the six AoCBF genes responded to low temperature and cold stress to different degrees, indicating that AoCBF played a role in the biological process of cashew nut in response to low temperature stress. The results summarized the basic characteristics of the AoCBF gene family and accumulated basic data for further molecular resistance research and application of cashews AoCBF genes.

cashew nut  /  low temperature response  /  CBF transcription factor  /  gene familiy  /  qRT-PCR
Hengjiu CUI, Jiaoke ZENG, Wen LI, Haijie HUANG, Shiqing PENG, Dong GUO, Jinji PU, Yongkai ZHOU, Huiliang LI. Identification of CBF Gene Family in Cashew and Its Expression Pattern in Response to Cold Stress[J]. Chinese Journal of Tropical Crops, 2024 , 45 (3) : 473 -480 . DOI: 10.3969/j.issn.1000-2561.2024.03.004
Year 2024 volume 45 Issue 3
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Article Info
doi: 10.3969/j.issn.1000-2561.2024.03.004
  • Receive Date:2022-12-19
  • Online Date:2026-06-26
  • Published:2024-03-25
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History
  • Received:2022-12-19
  • Revised:2023-02-22
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Affiliations
    1.College of Horticulture, Hainan University, Haikou, Hainan 570228, China
    2.Hainan Academy of Tropical Agricultural Resources, Haikou, Hainan 571101, China
    3.Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan 571101, China
    4.Key Laboratory for Quality Regulation of Tropical Horticultural Crops of Hainan Province, Haikou, Hainan 570228, China
    5.Tropical Crops Genetic Resources Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan 571101, China
    6.National Cultivar Improvement Center of Tropical Fruit Tree, Haikou, Hainan 571101, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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