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Mutant Threshold Capable of Inducing Expected Phenotype in Rubber Tree CRISPR/Cas9 Edited Seedlings
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Xianfeng YANG1, 2, 3, 4, Qiufei LIN1, 2, Udayabhanu JINU1, 2, 3, 4, Ji LI1, 2, Zunchao QIAN5, Yuting DENG1, 2, Tiandai HUANG1, 2, 3, 4, *
Chinese Journal of Tropical Crops | 2024, 45(8) : 1521 - 1527
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Chinese Journal of Tropical Crops | 2024, 45(8): 1521-1527
Omics & Biotechnology
Mutant Threshold Capable of Inducing Expected Phenotype in Rubber Tree CRISPR/Cas9 Edited Seedlings
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Xianfeng YANG1, 2, 3, 4, Qiufei LIN1, 2, Udayabhanu JINU1, 2, 3, 4, Ji LI1, 2, Zunchao QIAN5, Yuting DENG1, 2, Tiandai HUANG1, 2, 3, 4, *
Affiliations
  • 1.Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences / Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Haikou, Hainan 571101, China
  • 2.Haikou Key Laboratory of Innovative Tropical Plant Seedlings, Haikou, Hainan 571101, China
  • 3.Sanya Research Institute, Chinese Academy of Tropical Agricultural Sciences, Sanya, Hainan 572025, China
  • 4.National Key Laboratory for Tropical Crop Breeding, Sanya, Hainan 572025, China
  • 5.College of Tropical Crops, Yunnan Agricultural University, Pu’er, Yunan 665000, China
Published: 2024-08-25 doi: 10.3969/j.issn.1000-2561.2024.08.001
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Previously, we achieved gene editing using CRISPR/Cas9-RNP and plasmid in the PEG-mediated protoplasts transient transformation of rubber tree, and by targeting the HbPDS gene, callus with albino phenotype were obtained, but no edited plants were regenerated because the technology of embryogenesis from callus is not yet mature. In order to obtain gene edited seedlings, we used the same HbPDS target as previous in the callus editing, but used somatic embryos as the transformation receptor instead of callus. After hygromycin resistance screening, 116 positive T0 generation embryos were selected through Cas9 gene PCR detection, following by next generation sequencing, five embryos were found to be edited at the target, accounting for 4.3% of PCR positive embryos. At last, two regenerated plants were obtained, both were chimeric because only partial albino leaves appeared in the plantlet. Sequencing of both albino and green parts revealed that gene editing had occurred in all samples, besides a homozygous biallelic mutation in one albino leaf, all other leaves exhibited chimeric mutations, with mutant sequences in albino parts accounting for 86% to 100% ratio, while green parts accounting for 66% to 69% ratio. This indicates that the mutation threshold inducing the expected phenotype in rubber tree CRISPR/Cas9 editing plants is higher than 69%, ranging from 70% to 85%, providing theoretical guidance for obtaining gene editing seedlings with expected phenotype in the future. Meanwhile, it is proven that nearly all the regenerated plantlets obtained from T0 generation somatic embryos are chimeric, thus T0 generation embryos are not suitable as regenerated materials, but also providing insights to improve the regeneration procedure by using T1 embryo to get homozygous seedlings in the future. This is the first report about gene editing plants in rubber tree, although they are chimeric, it still enhances the understanding of the function of CRISPR/Cas9 in rubber tree, laying the foundation for improving and applying gene editing technology in rubber tree.

Hevea brasiliens  /  CRISPR/Cas9  /  HbPDS gene  /  gene editing  /  mutation threshold
Xianfeng YANG, Qiufei LIN, Udayabhanu JINU, Ji LI, Zunchao QIAN, Yuting DENG, Tiandai HUANG. Mutant Threshold Capable of Inducing Expected Phenotype in Rubber Tree CRISPR/Cas9 Edited Seedlings[J]. Chinese Journal of Tropical Crops, 2024 , 45 (8) : 1521 -1527 . DOI: 10.3969/j.issn.1000-2561.2024.08.001
Year 2024 volume 45 Issue 8
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Article Info
doi: 10.3969/j.issn.1000-2561.2024.08.001
  • Receive Date:2023-10-22
  • Online Date:2026-06-23
  • Published:2024-08-25
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History
  • Received:2023-10-22
  • Revised:2023-10-31
Funding
Affiliations
    1.Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences / Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Haikou, Hainan 571101, China
    2.Haikou Key Laboratory of Innovative Tropical Plant Seedlings, Haikou, Hainan 571101, China
    3.Sanya Research Institute, Chinese Academy of Tropical Agricultural Sciences, Sanya, Hainan 572025, China
    4.National Key Laboratory for Tropical Crop Breeding, Sanya, Hainan 572025, China
    5.College of Tropical Crops, Yunnan Agricultural University, Pu’er, Yunan 665000, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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