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Cloning, Subcellular Localization, and Expression Analysis of CeTIP4;1, an Aquaporin Gene Expressed in Cyperus esculentus Tubers
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Zhi ZOU, Yujiao ZHENG
Chinese Journal of Tropical Crops | 2024, 45(9) : 1823 - 1831
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Chinese Journal of Tropical Crops | 2024, 45(9): 1823-1831
Omics & Biotechnology
Cloning, Subcellular Localization, and Expression Analysis of CeTIP4;1, an Aquaporin Gene Expressed in Cyperus esculentus Tubers
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Zhi ZOU, Yujiao ZHENG
Affiliations
  • National Key Laboratory for Tropical Crop Breeding / Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences / Sanya Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan 571101, China
Published: 2024-09-25 doi: 10.3969/j.issn.1000-2561.2024.09.006
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Tonoplast intrinsic proteins (TIPs), which comprise a subfamily of aquaporin (AQP) mediating the water balance within plant cells, could be divided into five phylogenetic groups on the basis of sequence similarity, i.e., TIP1–TIP5. Based on the full-length transcriptome previously described in tigernut (Cyperus esculentus), a tuber-abundant TIP gene named CeTIP4;1 was cloned and characterized in this study. Sequence analyses revealed that CeTIP4;1 contained two conservative introns with a complete coding sequence of 753 base pairs (bp), putatively encoding 250 amino acids with the theoretical molecular weight of 25.57 kDa, the isoelectric point (pI) value of 6.02, and the grand average of hydropathicity (GRAVY) value of 0.884, implying its acidic and hydrophobic features. The deduced peptide possessed one conservative major intrinsic protein (MIP) domain and exhibited similar structural features with the structure resolved AtTIP2;1. Classification of CeTIP4;1 into the TIP4 group was supported by the phylogenetic analysis, which showed that CeTIP4;1 clusters with AtTIP4;1, OsTIP4;1, OsTIP4;2 and OsTIP4;3 with sequence similarities of 69.62%–82.94%. After gene cloning, a plant expression vector for subcellular localization, i.e., pNC-Cam1304-CeTIP4;1, was successfully constructed. When transiently overexpressed in tobacco (Nicotiana benthamiana) leaves, confocal laser scanning microscopy imaging showed that CeTIP4;1 was unexpectedly localized to the cell membrane. Further expression analysis indicated that CeTIP4;1 exhibited an apparent tissue-specific expression patter, predominately expressed in tuber, root, rhizome, and shoot apex. Moreover, among the four typical stages of developmental tuber examined in this study, i.e., initiation, medium swelling, late swelling, and maturation, CeTIP4;1 exhibited a bell-like expression pattern, peaking in medium swelling tubers and lowest in maturation tubers. These results lay a solid foundation for further uncovering the mechanism of water balance in tigernut tubers.

oil crop  /  tigernut  /  tuber  /  tonoplast intrinsic protein  /  subcellular localization  /  expression profile
Zhi ZOU, Yujiao ZHENG. Cloning, Subcellular Localization, and Expression Analysis of CeTIP4;1, an Aquaporin Gene Expressed in Cyperus esculentus Tubers[J]. Chinese Journal of Tropical Crops, 2024 , 45 (9) : 1823 -1831 . DOI: 10.3969/j.issn.1000-2561.2024.09.006
Year 2024 volume 45 Issue 9
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doi: 10.3969/j.issn.1000-2561.2024.09.006
  • Receive Date:2023-08-28
  • Online Date:2026-06-23
  • Published:2024-09-25
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  • Received:2023-08-28
  • Revised:2023-09-30
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    National Key Laboratory for Tropical Crop Breeding / Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences / Sanya Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan 571101, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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