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Construction of Core Germplasm of Mango Based on SSR Fluorescent Markers
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Yujuan TANG, Ying ZHAO, Enliang SONG, Yu ZHANG, Limei GUO, Guodi HUANG, Xiang LI, Shixing LUO
Chinese Journal of Tropical Crops | 2026, 47(3) : 613 - 622
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Chinese Journal of Tropical Crops | 2026, 47(3): 613-622
Germplasm Resources, Genetics & Breeding
Construction of Core Germplasm of Mango Based on SSR Fluorescent Markers
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Yujuan TANG, Ying ZHAO, Enliang SONG, Yu ZHANG, Limei GUO, Guodi HUANG, Xiang LI, Shixing LUO
Affiliations
  • Guangxi Subtropical Crops Research Institute/Guangxi Engineering Research Center of Green and Efficient Development for Mango Industry / Guangxi Key Laboratory of Quality and Safety Control for Subtropical Fruits, Nanning, Guangxi 530001, China
Published: 2026-03-25 doi: 10.3969/j.issn.1000-2561.2026.03.006
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Germplasm resources are the key material support for the breeding of new mango varieties and the sustainable development of the industry, and the efficient conservation and utilization are of great significance for mango research. In the study, 431 mango germplasm accessions were used. Combining different sampling strategies and genetic distances, the optimal sampling strategy combination for constructing the mango core collection was screened by the UPGMA clustering method, and the core collection was subsequently established. The results showed that the average effective number of alleles (Ne), average Shannon's information index (I), and average Nei's diversity index (H) of 12 pairs of primers was 4.0993, 1.534 and 0.7361, respectively, indicating that the mango germplasm possessed rich genetic diversity. The t-test results of genetic diversity parameters revealed that the core collection constructed by the combination of the locus priority sampling strategy and Nei & Li genetic distance had the highest Ne, H and I among all tested groups, with value of 4.2603, 0.7486 and 1.5855, respectively, demonstrating that the combination was the optimal method for constructing the mango core collection. The established core collection comprised 85 accessions, accounting for 19.72% of the original germplasm. The retention rate of Ne, I and H in the core collection reached 103.93%, 103.35% and 101.45%, respectively, indicating that although the core collection was much smaller in quantity than the original germplasm, it exhibited superior performance in genetic diversity-related indicators. Principal coordinate analysis (PCoA) showed that the distribution of the core collection uniformly covered the distribution range of the original germplasm in the principal coordinate space, suggesting that the core collection could comprehensively retain the genetic diversity characteristics of the original germplasm and had good representativeness.

mango  /  SSR  /  core germplasm  /  locus-priority sampling strategy  /  genetic distance
Yujuan TANG, Ying ZHAO, Enliang SONG, Yu ZHANG, Limei GUO, Guodi HUANG, Xiang LI, Shixing LUO. Construction of Core Germplasm of Mango Based on SSR Fluorescent Markers[J]. Chinese Journal of Tropical Crops, 2026 , 47 (3) : 613 -622 . DOI: 10.3969/j.issn.1000-2561.2026.03.006
Year 2026 volume 47 Issue 3
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doi: 10.3969/j.issn.1000-2561.2026.03.006
  • Receive Date:2025-11-02
  • Online Date:2026-06-26
  • Published:2026-03-25
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  • Received:2025-11-02
  • Accepted:2025-11-25
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    Guangxi Subtropical Crops Research Institute/Guangxi Engineering Research Center of Green and Efficient Development for Mango Industry / Guangxi Key Laboratory of Quality and Safety Control for Subtropical Fruits, Nanning, Guangxi 530001, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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