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Bioinformatics, Subcellular Localization and Expression Analysis of Gene Tai6.33665 in Sweet Potato
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Jun XIONG, Xiuhua TANG*, Minzheng WEI*
Chinese Journal of Tropical Crops | 2025, 46(11) : 2549 - 2558
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Chinese Journal of Tropical Crops | 2025, 46(11): 2549-2558
Omics & Biotechnology
Bioinformatics, Subcellular Localization and Expression Analysis of Gene Tai6.33665 in Sweet Potato
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Jun XIONG, Xiuhua TANG*, Minzheng WEI*
Affiliations
  • Cash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi 530007, China
Published: 2025-11-25 doi: 10.3969/j.issn.1000-2561.2025.11.001
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Sweet potato (Ipomoea batatas) is a globally significant food and functional crop, with its purple-fleshed varieties drawing particular attention due to the high anthocyanin content. Anthocyanins not only give the tubers distinct color but also possess antioxidant, anti-inflammatory, and disease-preventive physiological functions, making them highly valuable in the development of health foods. However, the biosynthesis of anthocyanins is regulated by a multi-level network, and the role of bHLH transcription factors in sweet potatoes has not been fully elucidated. This study focused on the sweet potato gene Tai6.33665, aiming to clarify its molecular characteristics, subcellular localization pattern, and regulatory role in anthocyanin accumulation, providing a theoretical basis for molecular breeding of high-anthocyanin sweet potato varieties. Using purple-fleshed sweet potatoe (PFSP) and white-fleshed sweet potatoe (WFSP) as materials, the study analyzed the protein structure and evolutionary relationship of Tai6.33665 through bioinformatics, detected the gene expression pattern using qRT-PCR, constructed a Tai6.33665-GFP fusion vector for transient transformation in tobacco, determined the subcellular localization using laser confocal microscopy, and analyzed the correlation between gene expression and anthocyanin content and the miRNA interaction mechanism. The results showed that the protein encoded by Tai6.33665 had a typical bHLH domain and was highly homologous to anthocyanin synthesis regulatory factors. Its expression level was significantly negatively correlated with anthocyanin accumulation (P<0.05), and it was targeted and inhibited by ib-miR52. Subcellular localization indicated that the protein was located in the endoplasmic reticulum, suggesting that it might indirectly regulate metabolism through post-translational modification or the endoplasmic reticulum pathway. This study confirmed that Tai6.33665 acted as a negative regulator of anthocyanin biosynthesis in sweet potatoes, and its function depended on subcellular localization specificity and miRNA-mediated post-transcriptional regulatory networks. This discovery not only enriches the theoretical framework of plant secondary metabolism regulation but also provides a dual-track strategy for molecular breeding by targeting knockout of Tai6.33665 or overexpression of ib-miR52 using CRISPR/Cas9, the genetic limitations of anthocyanin accumulation could be overcome, and new high-anthocyanin sweet potato varieties could be developed. Future work would focus on elucidating the interaction mechanism between the gene and MYB/WD40 proteins, as well as the regulatory pathway of its transcriptional activity by endoplasmic reticulum localization.

sweet potato  /  Tai6.33665  /  bioinformatics  /  subcellular localization  /  expression analysis
Jun XIONG, Xiuhua TANG, Minzheng WEI. Bioinformatics, Subcellular Localization and Expression Analysis of Gene Tai6.33665 in Sweet Potato[J]. Chinese Journal of Tropical Crops, 2025 , 46 (11) : 2549 -2558 . DOI: 10.3969/j.issn.1000-2561.2025.11.001
Year 2025 volume 46 Issue 11
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doi: 10.3969/j.issn.1000-2561.2025.11.001
  • Receive Date:2025-06-19
  • Online Date:2026-06-24
  • Published:2025-11-25
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  • Received:2025-06-19
  • Accepted:2025-08-05
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    Cash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi 530007, China
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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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