收藏切换
Establishment of TaqMan Probe Real-time Fluorescent Quantitative PCR Detection Method for Areca Palm Yellow Leaf Phytoplasma
收藏切换
PDF
Zhaowei LIN, Xiuli MENG, Qinghua TANG, Xiaoqing NIU, Weiwei SONG*
Chinese Journal of Tropical Crops | 2024, 45(6) : 1120 - 1126
Less
收藏切换
Chinese Journal of Tropical Crops | 2024, 45(6): 1120-1126
Omics & Biotechnology
Establishment of TaqMan Probe Real-time Fluorescent Quantitative PCR Detection Method for Areca Palm Yellow Leaf Phytoplasma
Full
Zhaowei LIN, Xiuli MENG, Qinghua TANG, Xiaoqing NIU, Weiwei SONG*
Affiliations
  • Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences / Hainan Innovation Center of Academician Team, Wenchang, Hainan 571339, China
Published: 2024-06-25 doi: 10.3969/j.issn.1000-2561.2024.06.004
Outline
收藏切换

Areca palm is an important tropical economic crop in Hainan Province. Areca palm yellow leaf disease (YLD) caused by phytoplasma infection is a devastating disease in the production of areca in China. In order to establish an accurate and efficient detection method for areca palm yellow leaf phytoplasma, this study designed and synthesized specific primers AMf/AMr and AM-Prode based on the 16S rDNA gene of areca palm yellow leaf phytoplasma. The method was used to test the accuracy, sensitivity, specificity and repeatability, and to detect phytoplasma diseases in other plants. The method could accurately detect the positive samples, and the healthy samples had no amplification curve. In the sensitivity test, the method could detect the sample concentration level of 1.16×101 copies/μL, and the standard curve equation was y=–3.4185x+43.624, the amplification efficiency was 96.12%, and the correlation coefficient R2=0.9833. In the specificity test, the method had good specificity for the detection of YLD, and the genomes of areca, other disease pathogens and the endophytes did not interfere with the method. In the repeatability test, the method had good repeatability for the detection of YLD. The detection method could be used to detect 8 phytoplasma diseases such as chinaberry yellow leaf disease, ‘Pericampylus glaucus’ witches' broom disease and pepper yellow leaf disease and the detection of phytoplasma has certain universality. The establishment of detection method is conducive to providing reliable technical means for the accurate diagnosis of YLD, pathogen monitoring and vector insect detection.

areca  /  areca palm yellow leaf disease  /  phytoplasma  /  TaqMan qPCR  /  disease detection
Zhaowei LIN, Xiuli MENG, Qinghua TANG, Xiaoqing NIU, Weiwei SONG. Establishment of TaqMan Probe Real-time Fluorescent Quantitative PCR Detection Method for Areca Palm Yellow Leaf Phytoplasma[J]. Chinese Journal of Tropical Crops, 2024 , 45 (6) : 1120 -1126 . DOI: 10.3969/j.issn.1000-2561.2024.06.004
Year 2024 volume 45 Issue 6
PDF
112
55
Cite this Article
BibTeX
Article Info
doi: 10.3969/j.issn.1000-2561.2024.06.004
  • Receive Date:2023-05-19
  • Online Date:2026-06-24
  • Published:2024-06-25
Article Data
Affiliations
History
  • Received:2023-05-19
  • Revised:2023-06-25
Funding
Affiliations
    Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences / Hainan Innovation Center of Academician Team, Wenchang, Hainan 571339, China
References
Share
https://castjournals.cast.org.cn/joweb/rdzwxb/EN/10.3969/j.issn.1000-2561.2024.06.004
Share to
QR

Scan QR to access full text

Cite this article
BibTeX
Citations
表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
关闭全屏
  • BibTeX
  • EndNote
  • RefWorks
  • TxT