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Development of Specific Oligonucleotide Probe Library of Aegilops Umbellulata and Construction of Oligo-FISH Karyotype
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Lijuan CHEN, Jing LUO, Xu ZHANG, Jin XIAO, Chunxia YUAN, Xiu’e WANG, Haiyan WANG
Journal of Triticeae Crops | 2025, 45(9) : 1147 - 1155
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Journal of Triticeae Crops | 2025, 45(9): 1147-1155
• Genetics & Breedin •
Development of Specific Oligonucleotide Probe Library of Aegilops Umbellulata and Construction of Oligo-FISH Karyotype
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Lijuan CHEN, Jing LUO, Xu ZHANG, Jin XIAO, Chunxia YUAN, Xiu’e WANG, Haiyan WANG
Affiliations
  • National Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization/Cytogenetics Institute/Collaborative Innovation Center for Modern Crop Production Co-sponsored by Province and Ministry(CIC-MCP), Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
Published: 2025-09-15 doi: 10.7606/j.issn.1009-1041.2025.09.01
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Ae. umbellulata (Aegilops umbellulata, 2n=2x=14, UU) is a tertiary gene resource for wheat improvement. In order to accurately identify the chromosomes of Ae. umbellulata U genome or the chromosome segments transferred into wheat, based on the next-generation sequencing information of Ae. umbellulata U genome, 13 oligonucleotide probes were designed for Oligo-FISH analysis according to the 17 possible specific satellite repeats identified. The Oligo-FISH results showed that 10 of the probes exhibited obvious hybridization signals on the chromosomes of Ae. umbellulata. The probe specificity analysis revealed that the five probes generated hybridization signals on the chromosomes of Ae. umbellulata, but there was no obvious hybridization signal on the chromosomes in wheat, which can be used as the specific probes to identify the chromosomes of U genome in wheat background. Two probes Oligo-pAu153 and Oligo-pAu263, generating rich and strong signals on Ae. umbellulata chromosome, and one probe Oligo-pAu133 specific for Ae. umbellulata chromosome combining with Oligo-pSc119.2 were used as a probe multiplex ONPS#AU1. The Oligo-FISH karyotype of Ae. umbellulata was constructed, which can accurately identify each chromosome of the U genome. It will accelerate the step for mining, transferring and utilizing the excellent genes of Ae. umbellulata.

Aegilops umbellulata  /  Next-generation sequencing  /  Satellite repeats  /  Oligonucleotide probe  /  Fluorescence in situ hybridization
陈丽娟, 罗婧, 张旭, 肖进, 袁春霞, 王秀娥, 王海燕. 小伞山羊草特异寡核苷酸探针开发和Oligo-FISH核型构建. 麦类作物学报, 2025 , 45 (9) : 1147 -1155 . DOI: 10.7606/j.issn.1009-1041.2025.09.01
Lijuan CHEN, Jing LUO, Xu ZHANG, Jin XIAO, Chunxia YUAN, Xiu’e WANG, Haiyan WANG. Development of Specific Oligonucleotide Probe Library of Aegilops Umbellulata and Construction of Oligo-FISH Karyotype[J]. Journal of Triticeae Crops, 2025 , 45 (9) : 1147 -1155 . DOI: 10.7606/j.issn.1009-1041.2025.09.01
Year 2025 volume 45 Issue 9
119
28
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doi: 10.7606/j.issn.1009-1041.2025.09.01
  • Receive Date:2024-06-02
  • Online Date:2026-09-18
  • Published:2025-09-15
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  • Received:2024-06-02
  • Revised:2024-07-17
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    National Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization/Cytogenetics Institute/Collaborative Innovation Center for Modern Crop Production Co-sponsored by Province and Ministry(CIC-MCP), Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
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表12种不同金属材料的力学参数
科
Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)
属
Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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