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Identification and Expression Analysis of Barley HSF Gene Family
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Mingyu SHI1, Hao FENG2, Zhugang LI1
Journal of Triticeae Crops | 2025, 45(7) : 922 - 931
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Journal of Triticeae Crops | 2025, 45(7): 922-931
• Genetics & Breedin •
Identification and Expression Analysis of Barley HSF Gene Family
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Mingyu SHI1, Hao FENG2, Zhugang LI1
Affiliations
  • 1.Engineering Research Center of Agricultural Microbiology Technology/Ministry of Education & Heilongjiang Provincial Key Laboratory of Plant Genetic Engineering and Biological/Fermentation Engineering for Cold Region/School of Life Sciences, Heilongjiang University, Harbin, Heilongjiang 150080, China
  • 2.Institute of Biotechnology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
Published: 2025-07-15 doi: 10.7606/j.issn.1009-1041.2025.07.07
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The heat shock transcription factor (HSF) family is closely associated with plant growth, development and stress responses. To explore the function of the barley HSF gene family, this study used bioinformatics methods to identify HvHSF genes at the whole genome level and analyze the physicochemical properties, subcellular localization, evolutionary relationships, and collinearity relationships of the HvHSF proteins, as well as the gene structure, promoter cis-acting elements, and protein interaction networks of HvHSF. The results showed that the molecular weight of 29 HvHSF proteins ranges from 10.24 kDa to 56.59 kDa, classified as relatively unstable hydrophilic proteins, with a predicted localization in the nucleus. Evolutionary analysis showed that barley HvHSF genes can be divided into A, B and C groups and are more closely related to rice. Collinearity analysis revealed that HvHSF5d and HvHSF7b are collinear gene pairs. Domain and gene structure analyses revealed that closely related HvHSF genes have similar domain structures and gene structures. Promoter cis-acting element analysis showed that the HvHSF promoter contains various cis-acting elements related to growth and development, as well as stress responses. Protein interaction network predictions indicated that HvHSF may be involved in plant stress response regulation and H2O2 scavenging. Through analysis of the barley stress transcriptome combined with qRT-PCR validation, it was found that HvHSF exhibited differential expression under salt and alkali stresses. The expression levels of HvHSF1a, HvHSF1b, HvHSF2a, HvHSF3c and HvHSF5b were increased under salt and alkali stresses. However, HvHSF6 performed increased expression level under salt stress, but decreased expression level under alkali stress. This study confirmed that the HSF gene family responds to salt and alkali stresses and may contribute to the regulation of salt-alkali tolerance.

Hordeum vulgare  /  Heat shock transcription factor (HSF)  /  Saline-alkali stress  /  Gene expression  /  Genome-wide identification
石明玉, 冯浩, 李柱刚. 大麦HSF基因家族成员的鉴定与表达分析. 麦类作物学报, 2025 , 45 (7) : 922 -931 . DOI: 10.7606/j.issn.1009-1041.2025.07.07
Mingyu SHI, Hao FENG, Zhugang LI. Identification and Expression Analysis of Barley HSF Gene Family[J]. Journal of Triticeae Crops, 2025 , 45 (7) : 922 -931 . DOI: 10.7606/j.issn.1009-1041.2025.07.07
Year 2025 volume 45 Issue 7
181
36
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doi: 10.7606/j.issn.1009-1041.2025.07.07
  • Receive Date:2024-04-09
  • Online Date:2026-09-18
  • Published:2025-07-15
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  • Received:2024-04-09
  • Revised:2024-05-17
Funding
Affiliations
    1.Engineering Research Center of Agricultural Microbiology Technology/Ministry of Education & Heilongjiang Provincial Key Laboratory of Plant Genetic Engineering and Biological/Fermentation Engineering for Cold Region/School of Life Sciences, Heilongjiang University, Harbin, Heilongjiang 150080, China
    2.Institute of Biotechnology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China
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表12种不同金属材料的力学参数
科
Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)
属
Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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