Journal of Integrative Agriculture
|
2026, 25(2): 709-720
• Horticulture •
Candidate gene analysis of cabbage head-splitting resistance based on QTL mapping and omics profiling
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Xiaowei Zhu1*, Min Wang1*, Xiang Tai1, Panling Lu1, Hang Gui2, Jinxiu Chen1#, Tianyue Bo1#
Affiliations
1Shanghai Key Laboratory of Protected Horticultural Technology, Protected Horticultural Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai 201403, China
2Shanghai Shengeng Agricultural Development Co., Ltd., Shanghai 201824, China
About Author:
#Correspondence Jinxiu Chen, E-mail: cabbagecjx@126.com; Tianyue Bo, E-mail: tybo@saas.sh.cn
* These authors contributed equally to this study.
doi: 10.1016/j.jia.2025.11.020
Outline
Head-splitting is a prevalent physiological disorder in cabbage that causes substantial economic losses. However, the genetic factors and molecular mechanisms underlying head-splitting resistance remain largely unexplored. This study identified a genomic region (qNLQ3.1) for head-splitting resistance on chromosome C03 through the combination of QTL-seq and GPS analysis in an F2population derived from hybridizing two cabbage inbred lines, ‘Dazhengfu’ (ZF, susceptible) and ‘103’ (resistant).Traditional genetic linkage analysis narrowed qNLQ3.1to a 74.6 kb region. Furthermore, comparative analysis of the two parental linesusing transcriptomic and metabolic profilingdemonstrated the crucial role of hormones in regulating head-splitting resistance. Bol028000, encoding a homologue of Arabidopsis Cytokinin Response Factor 3 (CRF3), emerged as a promising candidate for head-splitting resistance and was subsequently validated through Sanger sequencing and quantitative RT-PCR (qRT-PCR). Subcellular localisation analysis revealed that Bol028000was mainly expressed in the nucleus. Additionally, one kompetitive allele-specific PCR (KASP) marker from Bol028000was developed and utilized to screen 42 inbred lines. These findings enhance the theoretical understanding of head-splitting resistance and provide valuable insights for the molecular breeding of head-splitting resistant cabbages.
DWARF27
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carotene isomerase
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drought stress response
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strigolactone biosynthesis
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tillering
.
基于QTL作图与组学分析甘蓝耐裂球候选基因.
农业科学学报(英文版),
2026
, 25
(2)
: 709
-720
.
DOI: 10.1016/j.jia.2025.11.020
Xiaowei Zhu, Min Wang, Xiang Tai, Panling Lu, Hang Gui, Jinxiu Chen, Tianyue Bo.
Candidate gene analysis of cabbage head-splitting resistance based on QTL mapping and omics profiling[J].
Journal of Integrative Agriculture,
2026
, 25
(2)
: 709
-720
.
DOI: 10.1016/j.jia.2025.11.020
Year 2026 volume 25 Issue 2
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doi: 10.1016/j.jia.2025.11.020