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Integrated gut metagenomic and muscle proteomic analysis reveals the role of dietary fermented extruded brewers' spent grain in enhancing pork quality through the gut-muscle axis
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Yang Liu1, Yueqin Xie1, Jianqi Yang1, Yu Deng1, Dongyun Liu1, Junlei Chang1, Jiayong Tang1, Hua Zhao1, Xiaoling Chen1, Gang Tian1, Guangmang Liu1, Jingyi Cai1, Gang Jia1, *
Journal of Animal Science and Biotechnology | 2026, 17(4) : 2064 - 2082
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Journal of Animal Science and Biotechnology | 2026, 17(4): 2064-2082
ANIMAL NUTRITION AND FEEDSTUFF
Integrated gut metagenomic and muscle proteomic analysis reveals the role of dietary fermented extruded brewers' spent grain in enhancing pork quality through the gut-muscle axis
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Yang Liu1, Yueqin Xie1, Jianqi Yang1, Yu Deng1, Dongyun Liu1, Junlei Chang1, Jiayong Tang1, Hua Zhao1, Xiaoling Chen1, Gang Tian1, Guangmang Liu1, Jingyi Cai1, Gang Jia1, *
Affiliations
  • 1Key Laboratory for Animal Disease-Resistance Nutrition of China, Ministry of Education, Institute of Animal Nutrition, Sichuan Agricultural University, No. 211 Huimin Road, Chengdu, Sichuan 611130, China
Published: 2026-08-15 doi: 10.1186/s40104-026-01429-4
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Background

The fact that feeding pigs with probiotic-fermented agricultural by-products improves pork quality has been repeatedly demonstrated and widely applied, but the underlying mechanisms remain unclear. This study explored the effects of fermented extruded brewers' spent grain (FEBSG) on meat quality in growing-finishing pigs, as well as its regulatory mechanisms.

Methods

Sixty Duroc × Landrace × Yorkshire pigs (52.25 ± 2.10 kg) were randomly assigned to five dietary treatments, in which FEBSG replaced 0, 5%, 10%, 15%, and 20% of soybean meal (SBM). The experiment spanned 10 weeks.

Results

Compared with the control, 20% FEBSG significantly increased final body weight, average daily feed intake, and average daily gain, while decreasing feed to gain ratio (P < 0.05). Both 15% and 20% FEBSG improved carcass characteristics and meat quality, including higher carcass weight, loin eye area, and intramuscular fat content, along with lower drip loss and shear force (P < 0.05). These treatments also enhanced flavor-related amino acids and unsaturated fatty acids (P < 0.05), and improved umami and sweet taste profiles. Moreover, 20% FEBSG increased muscle fiber density and reduced fiber diameter, upregulated MyHC Ⅰ, MyHCⅡa, PGC-1α, AMPKα1, TFAM, and SDH activity, and downregulated MyHC Ⅱb and LDH activity (P < 0.05). Proteomic analysis identified 69 differentially expressed proteins, with enrichment in AMPK and PPAR signaling pathways. Metagenomic analysis revealed increased abundance of short-chain fatty acid-producing bacteria, including Clostridium, Lactobacillus, Prevotella, and Bartonella. Correlation analysis demonstrated associations between gut microbiota diversity and meat quality traits, as well as between dominant microbial genera and differentially expressed proteins, volatile fatty acids, muscle fiber characteristics, and the AMPK/PGC-1α/TFAM signaling pathway.

Conclusions

Partial replacement of SBM with FEBSG positively influenced growth performance and pork quality in pigs, with the underlying mechanisms may involve the activation of the AMPK/PGC-1α/TFAM signaling pathway via the gut-muscle axis, thereby enhancing mitochondrial biogenesis, muscle development, and metabolism.

Fermented extruded brewers' spent grain  /  Growth performance  /  Gut-muscle axis  /  Growing-finishing pigs  /  Meat quality
Yang Liu, Yueqin Xie, Jianqi Yang, Yu Deng, Dongyun Liu, Junlei Chang, Jiayong Tang, Hua Zhao, Xiaoling Chen, Gang Tian, Guangmang Liu, Jingyi Cai, Gang Jia. Integrated gut metagenomic and muscle proteomic analysis reveals the role of dietary fermented extruded brewers' spent grain in enhancing pork quality through the gut-muscle axis[J]. Journal of Animal Science and Biotechnology, 2026 , 17 (4) : 2064 -2082 . DOI: 10.1186/s40104-026-01429-4
  • Sichuan Science and Technology Program(2021ZDZX0009)
Year 2026 volume 17 Issue 4
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Article Info
doi: 10.1186/s40104-026-01429-4
  • Receive Date:2025-10-15
  • Online Date:2026-08-13
  • Published:2026-08-15
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History
  • Received:2025-10-15
  • Accepted:2026-04-21
Funding
Sichuan Science and Technology Program(2021ZDZX0009)
Affiliations
    1Key Laboratory for Animal Disease-Resistance Nutrition of China, Ministry of Education, Institute of Animal Nutrition, Sichuan Agricultural University, No. 211 Huimin Road, Chengdu, Sichuan 611130, China

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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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