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Genome-wide Identification of Glutathione S-Transferases (GSTs) Gene Family and Its Responses to Cadmium Stress in Ramie (Boehmeria nivea)
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Acta Agrestia Sinica | 2026, 34(1) : 10 - 22
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Acta Agrestia Sinica | 2026, 34(1): 10-22
Genome-wide Identification of Glutathione S-Transferases (GSTs) Gene Family and Its Responses to Cadmium Stress in Ramie (Boehmeria nivea)
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YAN Shi-wei1, GU Yi-zhou1, ZHAO Hao-han1, LIANG Shu-yue1, GAO Gang1, CHEN Ping1, ZHU Ai-guo1,2,3, CHEN Ji-kang1,2,3
Affiliations
    1 Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, Hunan Province 410221, China;
    2 Key laboratory of Genetic Breeding and Microbial Processing for Bast Fiber Crops, MARA, Changsha, Hunan Province 410221, China;
    3 Yuelushan Laboratory, Changsha, Hunan Province 410128, China
doi: 10.11733/j.issn.1007-0435.2026.01.002
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Glutathione S-transferases (GSTs) play an important role in the regulation of plants against stressful environments, but the systematic studies on Ramie were lack. In this paper, a total of 43 BnGSTs gene families were identified by bioinformatic analyses, most of which were predicted to be located in the cytoplasm and belonged to the plant-specific Tau and Phi class. Inter-species covariance analysis revealed that BnGSTs genes represented more orthologous genes in dicots than monocots; intra-species covariance analysis revealed that there were five pairs of paralogous genes among BnGSTs, all of which were derived from the whole genome or fragmentary gene duplication, and all of them were found that Ka/Ks ratios were less than 1, indicating that they were subjected to purifying selection. Cis-acting element prediction revealed that the upstream of these BnGSTs genes was rich in light-responsive, phytohormone-regulated and stress-responsive elements combined with transcriptome expression data, nine tissue-specific candidate genes were screened with significant (P<0.05) changes on expression patterns in roots, stems and leaves under cadmium stress. Two genes, BnGST22 and BnGST12, were identified as having significant up-regulation and high relative expression, which could be used as target genes for further functional verification. This study further enriched the functional gene pool of ramie and provided a theoretical basis for the use of anti-stress resources and variety selection.
Ramie  /  Glutathione S-transferases  /  Cadmium stress  /  Bioinformatic analysis
颜世伟, 顾一舟, 赵浩含, 梁舒月, 高钢, 陈平, 朱爱国, 陈继康. 苎麻谷胱甘肽S-转移酶家族全基因组鉴定及其对镉胁迫的响应. 草地学报, 2026 , 34 (1) : 10 -22 . DOI: 10.11733/j.issn.1007-0435.2026.01.002
YAN Shi-wei, GU Yi-zhou, ZHAO Hao-han, LIANG Shu-yue, GAO Gang, CHEN Ping, ZHU Ai-guo, CHEN Ji-kang. Genome-wide Identification of Glutathione S-Transferases (GSTs) Gene Family and Its Responses to Cadmium Stress in Ramie (Boehmeria nivea)[J]. Acta Agrestia Sinica, 2026 , 34 (1) : 10 -22 . DOI: 10.11733/j.issn.1007-0435.2026.01.002
Year 2026 volume 34 Issue 1
124
31
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doi: 10.11733/j.issn.1007-0435.2026.01.002
  • Receive Date:2025-03-17
  • Online Date:2026-09-23
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  • Received:2025-03-17
  • Revised:2025-06-12
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表12种不同金属材料的力学参数
科
Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)
属
Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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