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A highly active and selective chalcogen bond-mediated perchlorate channel
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Lin Yuana, Peng Jianga, Jingliang Hua, Huan Zenga, Yanping Huob, Zhongyan Li*, a, Huaqiang Zeng*, c
Chinese Chemical Letters | 2022, 33(4) : 2026 - 2030
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Chinese Chemical Letters | 2022, 33(4): 2026-2030
• Communication •
A highly active and selective chalcogen bond-mediated perchlorate channel
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Lin Yuana, Peng Jianga, Jingliang Hua, Huan Zenga, Yanping Huob, Zhongyan Li*, a, Huaqiang Zeng*, c
Affiliations
  • a College of Chemistry and Bioengineering, Hunan University of Science and Engineering, Yongzhou 425199, China
  • b Faculty of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou 510006, China
  • c Frontier Research Center for Multidisciplinary Sciences, School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an 710072, China
Published: 2022-04-15 doi: 10.1016/j.cclet.2021.09.089
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Artificial membrane transporters that either use chalcogen bonds to facilitate transmembrane flux of anions or show high selectivity toward perchlorate anions are rare. In this work, we report on one such novel monopeptide-based transporter system, featuring both chalcogen bonds for highly efficient anion transport and high transport selectivity toward ClO4- anions. Structurally, these monopeptide molecules associate with each other via H-bonds to produce H-bonded 1D stack that not only one dimensionally but also directionally aligns the terminal bicyclic thiophene motifs to the same side. Functionally, these well-aligned thiophenes create a sulfur-rich transmembrane pathway, combinatorially fine-tunable to enable anions to efficiently cross the membrane in the increasing activity of Cl- < Br- < NO3- < ClO4- via chalcogen bonds, with EC50 values of 0.75, 0.40, 0.37 and 0.093 μmol/L (0.3 mol% relative to lipid molecules), respectively.

Synthetic anion channel  /  Chalcogen bonds  /  Monopeptide  /  Thiophene  /  Perchlorate
Lin Yuan, Peng Jiang, Jingliang Hu, Huan Zeng, Yanping Huo, Zhongyan Li, Huaqiang Zeng. A highly active and selective chalcogen bond-mediated perchlorate channel[J]. Chinese Chemical Letters, 2022 , 33 (4) : 2026 -2030 . DOI: 10.1016/j.cclet.2021.09.089
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A sigma (σ)-hole bond [1-3] refers to noncovalent interactions between a lone pair of a Lewis base or an anion and an electron-deficient atom of group 14 (tetrels), 15 (pnictogens), 16 (chalcogens) and 17 (halogens) elements. Although halogen bonding has been extensively utilized to create diverse anion-binding host systems often with outstanding anion affinities and selectivities over the past ten years [1], its other sister σ-hole interactions (chalcogen, pnictogen and tetrel bonding) have received much less attention. While these σ-hole bonds have enabled ranging applications including anion sensing and catalysis [4, 5], their applications to facilitate transmembrane anion transport have just begun to be explored. This is in sharp contrast to a rich family of anion transporters mediated by H-bonds [6-18]. In fact, there exist only a handful of examples using halogen [19-22], chalcogen [23, 24] and pnictogen [24-26] bonds mostly as anion carriers to promote anion flux across the membrane.
In 2016, Matile and his co-workers reported 2, 2′-bithiophene derivatives including 1 as the anion carrier, mediating anion transport via a bifurcated chalcogen bond (Fig. 1a) [23]. Among ten derivatives tested, 1 is the most active with an EC50 value of 1.9 µmol/L (6 mol% relative to lipid) toward chloride anions. Given that the field of anion transporters is dominated by the carriers [12, 15] rather than channels [13, 17, 18, 21] and that chalcogen bonds have been scarcely studied for ion transport [23, 24], we became interested in developing anion channels making a full use of underutilized chalcogen bonds. We were further intrigued to find out the relative chalcogen bond-mediated ion-transporting activities between carrier and channel mechanisms.
In the same year of 2016, we invented a robust monopeptide-based scaffold as exemplified by F-Phe-C4 (Fig. 1b) [27]. The H-bonding capacity and directionality of the two amide bonds provides perfect driving forces to one-dimensionally align the molecules into a 1D stack, with the same type of side chains (e.g., Fmoc, Ph and C4H9) aligned to the same side, forming 3D gelling networks for rapid room-temperature gelation of spilled oil [27-29]. Inspired by this high directionality, we envisioned a high likelihood of generating chalcogen bond-mediated anion channel [21, 30] by replacing the Fmoc groups with sulfur-based σ-holes such as 1 [23]. Conceptually, this appears to be quite straightforward. Nevertheless, given the complex structure and accordingly time-consuming synthesis of molecule 1, there is a need for something much simpler. We therefore considered a simple commercially available bicyclic thiophene motif 2 (Fig. 1a) as one possible alternative to 1 for developing chalcogen-bond anion transporters.
We first carried out density functional theory (DFT) computations at the M062X/6-311G** level in the gas phase to compare the bite angles, bond lengths and binding energies of 1:1 complexes involving a chloride anion and molecules 1 or 2. Having a lengthened bond (3.2 Å), a much smaller binding energy (−11.0 kcal/mol) and a smaller bite angle (31°) than those for 1 (3.1 Å, −34.6 kcal/mol and 81°, respectively), molecule 2 likely may function as a much weaker anion transporter. Despite of this speculated weak activity by 2, we are still inclined to believe that many of these feeble anion binders, when vertically aligned on top of each other using the monopeptide-based scaffold (e.g., SL8 in Fig. 1c), may synergistically work to achieve an effect greater than the sum of the parts. In addition, a built-in combinatorial feature of the channel scaffold allows the ion transport activity and selectivity to be quickly optimized, possibly culminating in highly active and selective anion channels.
To investigate the ion transport properties of the designed channels, we employed a pH-sensitive HPTS (8-hydroxypyrene-1, 3, 6-trisulfonic acid) assay (Fig. 2a) [19]. In detail, large unilamellar vesicles (LUVs) of ~120 nm in diameter (Fig. S1 in Supporting information) were prepared from EYPC lipids in the buffer (10 mmol/L HEPES, 50 mmol/L NaCl, pH 7.0), with the HPTS dye (1 mmol/L) trapped inside LUVs. A pH gradient across the membrane was created by diluting these LUV suspensions into the same type of buffer having pH 8.0. The ion transport study was initiated by adding the channel molecules into LUV suspensions and monitoring pH-dependent fluorescence emission intensities at 510 nm, with excitations at 460 and 403 nm, successfully. For the HPTS dye, the ratiometric value of I460/I403 increases with increased pH. Using this HPTS assay, we screened a combination of 10 library members (five amino acids × two different alkyl chains, Fig. 1d). As summarized in Fig. 2b, at a concentration of 1.5 µmol/L (4.8 mol% relative to lipids), the most active channel SL8 reaches a fractional ion transport activity of 97% after background correction (e.g., 97% = (97% − 6%)/(100% − 6%)). This high activity is followed by SL10 (63%), SF8 (54%), SI10 (44%), SV10 (41%), SF10 (40%), SV8 (40%), SI8 (38%), SA10 (34%) and SA8 (10%).
Six control molecules Cr1-Cr6 were designed based on the most active SL8 (Fig. 1d). Displaying no ion transport activity (Fig. 2c), Cr1 clearly demonstrates that a simple bicyclic thiophene motif lacks an ability to move the ions across the membrane. Replacing the ester group in Cr1 with an amide group generates moderately active Cr2. This finding, together with the highly active SL8 that contains two amide groups, confirms the critical role played by the amide groups in linking weakly ion-binding thiophene groups via intermolecular H-bonds to form a transmembrane ion permeation pathway. While Cr3, which is structurally similar to Cr1, is expectedly inactive in ion transport, Cr4 turns out to be inactive, either. These contrasting performances between Cr2 and Cr4 suggest the formation of a weak intramolecular H-bond between the chlorine atom and the amide H-atom, likely attenuating the ability of the amide H-atom in forming the intermolecular H-bond with the amide O-atom of another molecule. As a result, Cr4 is incapable of H-bonding to each other to align the thiophene groups to form an ion permeation pathway. Indeed, 1H NMR dilution experiments (80 – 0.62 mmol/L) performed on both Cr2 and Cr4 show a significant change in chemical shift by more than 0.2 ppm for the amide proton in Cr2 and no noticeable change for that in Cr4 (Fig. S2 in Supporting information), convincingly demonstrating the involvement of amide proton in Cr2 in forming intermolecular H-bonds, and that in Cr4 in forming intramolecular H-bonds. The same explanation can be used to account for why chlorine-containing Cr5 is extremely weakly active (4%), particularly with respect to the excellent activity of 116% by the structurally similar SL8. But it is somewhat surprising to obtain a pretty good ion transport activity of 49% after background correction (52% before background correction) for Cr6 that contains a monocyclic thiophene group, which again confirms the importance of amide groups in assembling multiple bicyclic thiophene groups to facilitate transmembrane ion flux.
Using the same HPTS assay in Fig. 2a but replacing NaCl salt with other alkali metal salts MCl (M = Li, K, Rb and Cs), we observed roughly similar ion transport activities that are independent of alkali metal ions (Fig. 2d). This independence suggests Cl− anions to be the right ions transported by SL8, and Cl− efflux to be accompanied by either efflux of H+ or influx of OH− in order to maintain the system's charge neutrality.
To compare the relative transport rates between Cl− and H+ or OH−, potent proton carrier FCCP (0.25 nmol/L) was added into the extravesicular region (Fig. 2e). Under this LUV scheme, if Cl− efflux rate is faster than H+ efflux rate or OH− influx rate, significant increase in fluorescence intensity of HPTS is expected. Therefore, the fact that the presence of FCCP at 0.25 nmol/L only boosts the ion transport activity of SL8 by 7.9% (86.9%-79.0%, Fig. 2e), which is slightly larger than FCCP's intrinsic transport activity of 1.4%, indicates that although the Cl− is transported faster than that of H+ or OH−, their transport rates do not differ very significantly from each other.
To clarify anion transport mechanism (carrier or channel), we have attempted to record the single channel current traces of SL8 in symmetric baths (cis chamber = trans chamber = 1 mol/L KCl) using a Planar Lipid Bilayer Workstation (Warner Instruments), but our many attempts did fail to capture any current trace. Nevertheless, we were fortunate enough to successfully record single channel current traces (Fig. 3a) after switching from symmetric to unsymmetric baths (cis chamber = 1 mol/L KCl, trans chamber = 0.2 mol/L KCl). On the one hand, these current traces unequivocally confirm SL8-facilitated anion transport to proceed through a channel mechanism. On the other hand, based on the linear ohmic current-voltage (I-V) curve, the reverse potential value (εrev) was determined to be 31.33 mV from which the ion transport selectivity of Cl− over K+ was calculated to be 10 using equation εrev = RT/F × ln(PK+ /PCl−) where R = universal gas constant (8.314 J K−1mol−1), T = 300 K, F = Faraday's constant (96485 C/mol) and P = ion permeability.
Having established the channel-mediated anion transport mechanism, we applied the HPTS assay whereas both the intra- and extra-vesicular regions are filled with the same type of salts NaX (X = Cl, Br, NO3 and ClO4) to assess the anion transport selectivity of SL8 (Fig. 3b). At 0.3 µmol/L, SL8 displays increasing anion transport activities in the order of Cl− (14%) < Br− (33%) = NO3− (33%) < ClO4− (101%). Applying Hill analysis (Fig. 3b), further concentration-dependent measurements of transport activities yield EC50 value at which channel molecules reach 50% transport activity for Cl− (0.75 ± 0.02 µmol/L). Despite the fact that motif 2 interacts with anions much weaker than 1, channel SL8 made up of one-dimensionally aligned 2 exhibits a chloride transport activity that is about 2.5 times as better as carrier 1.
Additional evaluations provide EC50 values for Br− (0.40 ± 0.02 µmol/L), NO3− (0.37 ± 0.03 µmol/L) and ClO4− (0.093 ± 0.004 µmol/L) (Fig. 3b and Fig. S3 in Supporting information). In the case of ClO4−, the corresponding EC50 value in terms of molar ratio relative to lipid molecules is 0.3 mol%. Based on the hydrophobic membrane thickness of 28 Å for EYPC (egg yolk l-α-phosphatidylcholine) lipid membrane [31] and an inter-chain distance of 4.8 Å in SL8, roughly six molecules are required to span the hydrophobic membrane region. That is, channel (SL8)6 should represent the most likely ensembles for facilitating transmembrane anion transport. Accordingly, the true ClO4− transport activity of (SL8)6 is in fact 5 times better, having an EC50 value of 0.05 µmol/L in terms of effective channel concentration. It might be worth mentioning that while the fluorescence emission curve excited at 460 nm looks abnormal and ion transport efficiencies therefore can't be confidently determined for F− ions, the blank signal in the absence of channel molecules already exceeds 100% for I− ions, making determination of channel-mediated I− transport efficiency unrealistic (Fig. S4 in Supporting information).
Lastly, while artificial anion transporters have predominantly focused on the chloride transport due to their relevance to cystic fibrosis [12], their anion transport selectivity often has not been elucidated in detail. Among those with anion transport selectivity systematically investigated to include ClO4− anion, we are aware of transporters selective toward Cl− [19, 21, 23, 32], NO3− [33, 34], I− [31] or SCN− [35]. To the best of our knowledge, ClO4−-selective anion transporters are rare, and our work represents one of such rare examples and highly likely the very first example in the literature.
In summary, applying a structurally simple monopeptide scaffold recently established by us [21, 27-30], we have successfully developed a chalcogen bond-mediated anion-transporting channel system. The built-in combinatorial feature of the system allows for quick optimization of membrane transport property, culminating in a discovery of a powerful yet structurally very simple anion channel SL8. In addition to its high transport efficiency (EC50 = 0.093 µmol/L or 0.3 mol% relative to lipid molecules), perchlorate-transporting channel SL8 is unusually characterized by its high transport selectivity, having selectivity factors of 4–8 with respect to Cl−, Br− and NO3− anions. We believe our work might inspire others in the exploitation of σ-hole interactions in designing new functional materials, which is still in its infancy, for diverse applications.
Declaration of competing interest
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The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
Acknowledgments
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This work was supported by the construct program of applied characteristic discipline in Hunan University of Science and Engineering, the Technology Plan of Guangdong Province (No. 2019A050510042), the Natural Science Foundation of Hunan Province of China (No. 2021JJ30291) and Northwestern Polytechnical University.
Supplementary materials
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Supplementary material associated with this article can be found, in the online version, at doi:10.1016/j.cclet.2021.09.089
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Year 2022 volume 33 Issue 4
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doi: 10.1016/j.cclet.2021.09.089
  • Receive Date：2021-05-07
  • Online Date：2025-12-19
  • Published：2022-04-15
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  • Received：2021-05-07
  • Revised：2021-09-24
  • Accepted：2021-09-25
Affiliations
    a College of Chemistry and Bioengineering, Hunan University of Science and Engineering, Yongzhou 425199, China
    b Faculty of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou 510006, China
    c Frontier Research Center for Multidisciplinary Sciences, School of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'an 710072, China
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表12种不同金属材料的力学参数
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Family		 属数
Number of
genus		 种数
Number of
species		 占总种数比例
Percentage of
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鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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