Aiming for targeted imaging of
in vivo hypoxic tumor, an efficient NTR-activated fluorescent probe NanoBodipy was designed. NanoBodipy fabricated based on bodipy has an NIR optical window and displayed enhanced fluorescence for increased light penetrability and minimal interference from autofluorescence [
37–
39]. The synthesis of PEG-Bodipy involved three steps, as shown in Fig. S1. Firstly, 2-nitrobenzene was introduced into the bodipy scaffold as a switch for NTR activation, obtaining G-Bodipy. Secondly, the 3, 5-positions of the bodipy were substituted with 4-formylphenoxyacetic acid to obtain R-Bodipy. With an extended
π conjugation system, the maximum excitation and emission peaks of R-Bodipy were tuned into the NIR region, enhancing the light penetrability, and reducing autofluorescence interference. Lastly, R-Bodipy was conjugated with a PEG chain to obtain PEG-Bodipy for enhanced biocompatibility. As shown in Fig. S2 (Supporting information), the synthetic R-Bodipy was identified to be pure. The high-resolution MS (HRMS) spectrum suggested that the formula of R-Bodipy was C
37H
30BF
2N
3O
8 with a mass of 692.2149, which were in accordance with the structure and chemical molecular weight of R-Bodipy (Fig. S3 in Supporting information). The HPLC profile in Fig. S4 (Supporting information) demonstrated the purity of the synthesized R-Bodipy, with a retention time of 14.146 min. As shown in Fig. S5 (Supporting information),
1H nuclear magnetic resonance (NMR) spectrum of PEG-Bodipy exhibited the characteristic peaks of both Bodipy and PEG chains, confirming that R-Bodipy was successfully conjugated with PEG chains. According to Fig. S6 in Supporting information, the matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) spectrum of PEG-Bodipy exhibited a molecular weight of approximately 5700, which was consistent with the predicted chemical molecular weight of PEG-Bodipy. In addition, there is no signal observed at the molecular weight of approximately 10,000 in the MALDI-TOF MS, suggesting that PEG modification only happen to one -COOH in the R-Bodipy, ascribed to the steric hindrance. The above results provided confirmation of the successful synthesis of R-Bodipy and PEG-Bodipy. An effective NTR-catalyzed reaction was preformed depending on enzyme-probe binding, enzyme catalysis and finally product departure processes. The binding capability between probe and NTR is vital for the following catalysis and departure steps. Thus, docking experiments were performed to evaluate the binding preference of PEG-Bodipy towards NTR, then preliminarily investigate the practicability of the design of the NTR-activated probe. However, owing to the unduly large molecular weight of PEG-Bodipy, the calculation was failed to perform. Thus, R-Bodipy was substituted for PEG-Bodipy to investigate the binding capability between probe and NTR. As shown in Fig. S7a (Supporting information), the distance between R-Bodipy and NTR were determined to be between 1.8–2.2 Å, the short distance favored the efficient probe-enzyme interaction. The probe-binding sites was delineated to be ASN-41, LYS-75, SER-76, LYS-173 and GLN-98 (Figs. S7b–d in Supporting information). In addition, the binding energy value of enzyme-probe complexes was estimated to be −6.89 kcal/mol, suggesting the interaction between R-Bodipy and NTR (Table S1 in Supporting information). Flavin mononucleotide (FMN) group as the active site of NTR plays an important role in the redox reaction. The distance between R-Bodipy and FMN-300 was determined to be 10 Å (≤10 Å), suggesting that R-Bodipy enabled to interact with NTR. However, the -COOH of R-Bodipy was considered to have a great influence of binding capability. As shown in Fig. S8a (Supporting information), a new molecule (like-PEG-Bodipy) was designed to simulate the PEG-Bodipy. Then, the binding capability of the new molecule and NTR was investigated (Figs. S8a–d in Supporting information). The distance between like-PEG-Bodipy and NTR was determined to be between 2.0–2.2 Å. The binding sites were determined to be GLN-98, SER-76 and LYS-75. Furthermore, the binding energy value of enzyme-substitute complexes was estimated to be −7.28 kcal/mol (Table S2 in Supporting information). The distance between like-PEG-Bodipy and FMN-300 was determined to be 8.0 Å (≤10 Å), suggesting that like-PEG-Bodipy enabled to interact with NTR. The quantitative docking results of R-Bodipy and like-PEG-Bodipy provided the first line of evidence that NanoBodipy might be an "OFF-ON" probe activated by NTR.