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Design, synthesis and pharmacological evaluation of 1,2,3,4-tetrahydrobenzofuro[2,3-c]pyridine derivatives as p21-activated kinase 4 inhibitors for treatment of pancreatic cancer
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Yang Lia, c, Yan Fangb, d, Xiaoyu Chena, c, Linjiang Tongb, Fang Fengb, Qianqian Zhoub, d, f, Shulun Chena, b, Jian Dingb, d, f, Hua Xieb, d, e, f, *, Ao Zhanga, c, *
Acta Pharmaceutica Sinica B | 2025, 15(1) : 438 - 466
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Acta Pharmaceutica Sinica B | 2025, 15(1): 438-466
ORIGINAL ARTICLE
Design, synthesis and pharmacological evaluation of 1,2,3,4-tetrahydrobenzofuro[2,3-c]pyridine derivatives as p21-activated kinase 4 inhibitors for treatment of pancreatic cancer
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Yang Lia, c, Yan Fangb, d, Xiaoyu Chena, c, Linjiang Tongb, Fang Fengb, Qianqian Zhoub, d, f, Shulun Chena, b, Jian Dingb, d, f, Hua Xieb, d, e, f, *, Ao Zhanga, c, *
Affiliations
  • aShanghai Frontiers Science Center of Drug Target Identification and Delivery, School of Pharmaceutical Sciences, Shanghai Jiao Tong University, Shanghai 200240, China
  • bState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
  • cNational Key Laboratory of Innovative Immunotherapy, Shanghai Jiao Tong University, Shanghai 200240, China
  • dUniversity of Chinese Academy of Sciences, Beijing 100049, China
  • eZhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
  • fHangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China
About Author:

E-mail addresses: (Hua Xie)

These authors made equal contributions to this work.

Author contributions

Yang Li: Investigation, Conceptualization, Methodology, Data curation, Formal analysis, Writing – original draft, Writing –review and editing. Yan Fang: Investigation, Conceptualization, Methodology, Data curation, Formal analysis, Writing – original draft, Writing – review and editing. Xiaoyu Chen: Methodology, Data curation, Formal analysis, Writing – review and editing. Linjiang Tong, Methodology, Data curation. Fang Feng, Methodology, Data curation. Qianqian Zhou, Methodology, Data curation. Shulun Chen, Methodology, Data curation. Jian Ding: Supervision, Resources. Hua Xie: Supervision, Resource, Writing– review and editing. Ao Zhang: Supervision, Resource, Writing– review and editing.

doi: 10.1016/j.apsb.2024.10.002
Outline
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The p21-activated kinase 4 (PAK4), a key regulator of malignancy, is negatively correlated with immune infiltration and has become an emergent drug target of cancer therapy. Given the lack of high efficacy PAK4 inhibitors, we herein reported the identification of a novel inhibitor 13 bearing a tetrahydrobenzofuro[2,3-c]pyridine tricyclic core and possessing high potency against MIA PaCa-2 and Pan02 cell lines with IC50 values of 0.38 and 0.50 μmol/L, respectively. This compound directly binds to PAK4 in a non-ATP competitive manner. In the mouse Pan02 model, compound 13 exhibited significant tumor growth inhibition at a dose of 100 mg/kg, accompanied by reduced levels of PAK4 and its phosphorylation together with immune infiltration in mice tumor tissue. Overall, compound 13 is a novel allosteric PAK4 inhibitor with a unique tricyclic structural feature and high potency both in vitro and in vivo, thus making it worthy of further exploration.

P21-activated kinase 4  /  Tetrahydrobenzofuro[2,3-c]pyridine  /  Structure-activity relationship  /  Allosteric inhibitor  /  Pharmacokinetics properties  /  Kinase selectivity  /  Pancreatic cancer  /  Immune infiltration
Yang Li, Yan Fang, Xiaoyu Chen, Linjiang Tong, Fang Feng, Qianqian Zhou, Shulun Chen, Jian Ding, Hua Xie, Ao Zhang. Design, synthesis and pharmacological evaluation of 1,2,3,4-tetrahydrobenzofuro[2,3-c]pyridine derivatives as p21-activated kinase 4 inhibitors for treatment of pancreatic cancer[J]. Acta Pharmaceutica Sinica B, 2025 , 15 (1) : 438 -466 . DOI: 10.1016/j.apsb.2024.10.002
The p21-activated kinases (PAKs), a class of serine/threonine kinases, were initially considered as downstream effectors of p21ras-related proteins1. There are at least six sub-types in the PAKs family which can be divided into group I (PAK1‒3) and group II (PAK4‒6) according to the amino acid sequence and protein structure2. Growing evidence has revealed that the gene amplification and protein overexpression of PAKs are common in various tumors, such as pancreatic3,4, ovarian5, breast6,7, and gastric cancers8, which may play key roles in promoting proliferation and metastasis of these tumor cells9,10. However, a previous study revealed that inhibition of PAK1 or PAK2 just has a narrow therapeutic window11, suggesting the disadvantages of pan-PAK inhibitors.
Recently, PAK4, a key member of the group II PAKs, has aroused great interest due to its oncogenic and tumor immunomodulatory properties. Multiple studies have demonstrated that PAK4 is overexpressed in the esophagus12, bladder13, breast7, and pancreatic cancers4, and inhibition or knockout of PAK4 significantly suppressed the proliferation of these tumor cells. In addition, accumulating studies have shown that PAK4 is an adverse factor in the resistance and survival of pancreatic cancer14-17. Meanwhile, Rodriguez and coworkers18 recently revealed that PAK4 inhibition increased T-cell infiltration, and synergistically enhanced the efficacy of PD-1 therapy in melanoma. Soon afterward, combinations of PAK4 inhibition and immunotherapy were also reported to treat glioblastoma and prostate cancer19,20. All these findings confirmed that PAK4 is an emergent and promising therapeutic target of cancer therapy.
At present, various PAK4 inhibitors have been disclosed (Fig. 1). PF-3758309 (1), developed by Pfizer, is a pan-PAKs inhibitor with a Ki value of 18.7 nmol/L for PAK4, but its clinic development was discontinued due to adverse events2,21. GNE-2861 (2), developed by Genentech Inc., is a highly selective PAK4 inhibitor with a Ki value of 3.3 nmol/L22, but its antitumor activity in vivo was not reported. The aminoquinazoline derivative CZh226 (3) was disclosed by Hao and coworkers23 as a potent PAK4 inhibitor with a Ki value of 9 nmol/L, nevertheless, its poor pharmacokinetic properties hindered its further development. Compounds 13 were representatives of orthosteric PAK4 inhibitors interacting in the conserved ATP-binding site.
KPT-9274 (4) represents the first PAK4 allosteric modulator discovered by Karyopharm Therapeutics Inc. (Fig. 1)24. Currently, there are two clinical trials ongoing (NCT04914845, NCT04281420)25. Available results have shown that 4 reduced the stability of PAK4 protein, decreased the levels of p-PAK4, and blocked the downstream signal pathway7. In vivo, this compound significantly suppressed the growth of kidney26, breast7, myeloid27,28, esophagus12, and pancreatic cancers4. KPT-7523 (5), an analogue of 4, also showed specific binding with PAK4 and nearly no interaction with the other isoforms27. However, the allosteric interaction mechanism of both compounds 4 and 5 needs to be further elucidated since very limited studies have been performed27. In view of the potential safety concern on the early orthosteric PAK4 inhibitors and the prospective advantages of allosteric inhibitors, we conducted a scaffold-hopping strategy on the clinical allosteric inhibitor 4 by cyclizing its bicyclic benzofuran core into a tetrahydrobenzofuro[2,3-c]pyridine tricyclic core (Fig. 2). Subsequent elaboration of binding sites led to a new potent PAK4 inhibitor 13 showing promising both in vitro and in vivo activities. Herein, we reported the design, synthesis, and pharmacological characterization of these novel PAK4 inhibitors.
Firstly, we conducted a literature analysis on all disclosed analogues of compound 4 and found that the benzofuran core plays a pivotal role in maintaining the activity against cancer cells25,26, disrupting the bicyclic scaffold or replacing it with other bicyclic frameworks, such as benzothiophene or indole, negatively impacts the antiproliferative activity. The β-aminopyridinyl acrylamido fragmentation is an additional important pharmacophore as the optimal substitution pattern of the furan ring. The C6 position benzamide tail and the C8 position para-fluorobenzene head group represent the two versatile handles for fine-tuning the activity. Based on these analyses, we decided to perform a strategic cyclization approach on the central benzofuran core of compound 4, thus leading to a new tricyclic structure core—tetrahydrobenzofuro[2,3-c]pyridine (Fig. 2). In the meantime, various substitution patterns at the C1-, C6- and C8-positions were elaborated to achieve high potency and druglike PAK4 inhibitors.
Since there is no reported method to quantitatively evaluate the PAK4 allosteric inhibition, we conduct a preliminary screening of new compounds by anti-proliferative assay. All the new compounds and 4 (KPT-9274) were evaluated for their anti-proliferative activity against MIA PaCa-2 pancreatic and U-2 osteosarcoma (OS) cancer cell lines both overexpressing PAK4. As shown in Table 1, we first evaluated the activities of the tricyclic compounds 611 with or without substitution on the C1-position. Varied activities were observed for these compounds in the PAK4-overexpressing cancer cells. Compared to the submicromolar anti-proliferative effects of compound 4 in MIA PaCa-2 and U-2 OS cells (0.4 and 0.8 μmol/L), the new tricyclic compared 6 was 2- to 5-fold less potent with IC50 values of about 2 μmol/L against both cells. All the rest of the compounds of this subseries (711) showed nearly no antiproliferative activities against the two tested cancer cells with IC50 values of greater than 10 μmol/L, suggesting the limited steric tolerance at the C1-site.
Since the tetrahydrobenzofuro[2,3-c]pyridine 6 retained reasonable potency in PAK4-expressed cancer cells, we decided to keep this tricyclic core intact and elaborate other structural components. As shown in Table 2, a series of heteroatom-substituted phenyl or heterocyclic rings were employed to replace the right-hand benzoic moiety (C6-position) with the aim to reducing the lipophilicity of the biphenyl fragment. The fluoro-substituted phenyl analogue 12 exhibited an inhibitory activity comparable to that of compound 6 in the MIA PaCa-2 cell with an IC50 value of 2.66 μmol/L, but reduced activity in the U-2 OS cell with an IC50 value over 10 μmol/L. Conversely, pyridinyl analogues 13 and 14 showed significantly enhanced potency against both cancer cells with IC50 values ranging between 0.38 and 0.94 μmol/L, which were nearly equally potent to the clinical compound 4. Meanwhile, compounds 1518 bearing other nitrogen-containing heterocycles were evaluated. Intriguingly, reduced potency was observed for the two-nitrogen-containing pyrimidinyl or pyrazinyl analogues 1517. However, the pyridazinyl congener 18 showed high anti-proliferative activities against both MIA PaCa-2 and U-2 OS cells with IC50 of 0.23 and 0.64 μmol/L, respectively, which were slightly more potent than the reference compound 4 (0.42 and 0.84 μmol/L respectively in the two cancer cells).
Encouraged by the high potency of the tricyclic compound 18 bearing a pyridazinyl moiety within the C6 sidechain, we further optimized the terminal substituent on the C6-pyridazinyl moiety by replacing the 4,4-difluoropiperidine-1-carbonyl group with various cyclic or acyclic bioisosteric congeners. As depicted in Table 3, replacing 4,4-difluoropiperidine with morpholine, N-methylpiperazine, or pieridin-4-one generated compounds 1921, all retaining good potency in the two cancer cell lines, but were slightly less potent than compound 18. In general, these compounds were more sensitive to the MIA PaCa-2 pancreatic cell than against the U-2 osteosarcoma cancer cells, especially pieridin-4-one 21 showing a 7-fold different potency in the two cell lines with IC50 values of 0.19 and 1.38 μmol/L, respectively. Similarly, compound 22 bearing a 4-cyano-4-methylpiperidine-1-carbonyl as the terminal moiety also showed high potency (0.13 μmol/L) in the MIA PaCa-2 but low potency (1.04 μmol/L) in the U-2 OS cells. Compound 23 with a downsized substituent 3-(difluoromethyl)azetidine and compound 24 bearing a 6,6-difluoro-3-azabicyclo[3.1.0]hexane both retained good potency with sub-micromolar IC50 values (0.39–1.08 μmol/L). Compounds 2527 bearing an acyclic amido linkage other than cyclic amido ones retained good potency in both cells, but (3,3-difluoro-1-methylpiperidin-4-yl)carbamide 25 showed a high potency of 0.19 μmol/L and over 6-fold selectivity in the MIA PaCa-2 cell than in the U-2 OS cells (1.19 μmol/L). Unfortunately, compounds 2829 containing a reversed amido linkage showed much-reduced potency in the two cells, though compound 29 retained moderate potency around 3 μmol/L.
Next, we performed structural elaboration of 4-fluorobenzene moiety as the head group of the tricyclic skeleton. As shown in Table 4, we used compound 25 as the mode compound since it showed high anti-proliferative potency in the MIA PaCa-2 cell (IC50 = 0.19 μmol/L). Replacement of the 4-fluorophenyl with smaller groups, such as Cl, methyl, and cyclopropyl led to compounds 3032 showing much-reduced potency. De-aromatic analogues 33 and 34 also showed a significant decrease in potency. The bioisosteric thien-3-yl analogue 35 retained good potency in the two cells with IC50 values of 0.65 and 1.20 μmol/L, respectively. Other substituted phenyl analogues 3638 also showed reduced potency. These results suggested that the 4-fluorophenyl group in the tricyclic core is crucial for antiproliferative activity in the PAK4-expressed cancer cells.
From the SAR studies above, several tricyclic compounds showed comparable or even higher potency than the bicyclic reference compound 4. Meanwhile, compared to 4, these new compounds possessed a more pronounced preference against the MIA PaCa-2 pancreatic cell than against U-2 osteosarcoma cancer cells. Since treatment of pancreatic cancer is an unmet clinical need and PAK4 has been found over-expressed in pancreatic cells, therefore, PAK4 inhibitors may provide therapeutic benefits for this most detrimental cancer. In this regard, we selected the seven potent compounds (13, 18, 19, 21, 22, 24, and 25) and tested their antiproliferative effects against a broad spectrum of pancreatic cancer cell lines. As shown in Table 5, six pancreatic cancer cell lines (AsPC-1, Pan02, HPAF-II, PANC-1, BxPC-3, and CFPAC-1) were selected and a normal human pancreatic ductal cell line (hTERT-HPNE) was employed for comparison. All the tricyclic compounds and the reference compound 4 were significantly potent against AsPC-1, Pan02, and HPAF-II cells with submicromolar IC50 values, while nearly ineffective against PANC-1, BxPC-3, and CFPAC-1 cell lines, which were in accordance to the levels of PAK4 expression in these cell lines (Supporting Information Fig. S1 and Table S1). In particular, our new tricyclic compounds displayed a 3‒7-fold improvement in activity against the Pan02 cell line compared to 4. Additionally, these compounds did not exhibit significant anti-proliferative potency against normal pancreatic ductal cells (hTERT-HPNE). These results excluded the general cytotoxicity of these new compounds.
To investigate the PAK4 involvement in the anti-proliferative activity, we tested the effects of compounds on PAK4 phosphorylation and downstream signaling. As shown in Fig. 3, both the levels of phosphorylated PAK4 (p-PAK4) and phosphorylated β-Catenin (p-β-Catenin) were decreased following treatment with the selected compounds. Most of the selected compounds, especially compounds 13, 18, 19, 21, 22, and 25 were superior to 4 in reducing both p-PAK4 and p-β-Catenin. The results suggested that these compounds suppressed the PAK4 signaling pathway. Given the different structural features and the high inhibitory activity both on PAK4 signaling and on cell proliferation, compounds 13, 22, and 25 were chosen for further investigation.
To validate the developmental potential of these tricyclic compounds, we tested the pharmacokinetics (PK) properties of compounds 4, 13, 22, and 25 in rats after intravenous (i.v.) administration of 1 mg/kg and oral (p.o.) administration of 3 mg/kg. As shown in Table 6, compound 4 exhibited an extremely high plasma exposure (AUClast = 94,401 h*ng/mL) and a very low clearance (CL_obs = 0.169 mL/min/kg) in intravenous administration at a dose of 1 mg/kg. Similarly, an extremely high plasma exposure (AUClast = 55,493 h*ng/mL) was also observed for 4 following oral administration at a dose of 3 mg/kg. The high plasma exposure and low clearance profile of 4 support its high antitumor efficacy in vivo but also propose a potential safety concern on its high accumulation in vivo. The three new compounds displayed significant discrepancies in plasma exposure either orally or intravenously. Compound 13 bearing a piperidyl moiety showed the highest plasma exposure both orally (AUClast = 1590 h·ng/mL) and intravenously (AUClast = 4070 h·ng/mL) and the lowest plasma clearance (CL_obs = 4.06 mL/min/kg) in intravenous administration. Therefore, compound 13 has a longer half-life and an acceptable oral bioavailability of 13%. Unfortunately, compounds 22 and 25 both bearing a pyridazinyl moiety showed less optimal PK properties, especially compound 22 showing the lowest plasma exposure and nearly no oral availability. In addition, the hERG inhibitory activity of compound 13 was measured to evaluate the potential cardiotoxicity. As shown in Table 6, this compound showed an IC50 greater than 40 μmol/L in the patch-clamp assay, indicating its high safety index. Based on these results, compound 13 was elected for further mechanism and in vivo studies.
In order to elucidate whether compound 13 directly targets PAK4, we prepared a photoaffinity-labeled probe 39 (Fig. 4A) with a structure similar to compound 13 and performed a competition assay using Western blot analysis. As shown in Fig. 4B, PAK4 protein was detected in probe-labeled products and the PAK4 protein was significantly reduced in the presence of compound 13. A similar result was observed in the presence of the reference compound 4 (KPT-9274). These results indicated that compound 13 directly interacted with PAK4 in a similar pattern to 4. To further confirm the interaction mode of compound 13 with PAK4, a surface plasmon resonance (SPR) assay was performed. Due to the poor aqueous solubility of compound 13, the more aqueously soluble analogue 25 (HCl salt: 30 mg/mL) was selected to test the binding affinity with the PAK4 kinase domain. Similarly, compound 5 (KPT-7523), the close analogue of 4, was selected as the control due to its good aqueous solubility and the confirmed study on its binding to the kinase domain of PAK4 in the previous study27. As shown in Fig. 4C, compound 25 exhibited a medium affinity with a KD value of 2.35 μmol/L, which is superior to that of compound 5 with a KD value of 9.65 μmol/L (Supporting Information Fig. S2). To further investigate the binding mode of 25, the affinity with the full-length PAK4 was determined, and the KD value was 8.20 μmol/L (Supporting Information Fig. S3). These results suggest that compound 25 has a preferential binding affinity for the kinase domain of PAK4. Subsequently, the SPR competition assay was performed. The reported binding affinity of the orthosteric PAK4 inhibitor 1 (PF-3758309), which binds to the ATP pocket, was 4.5 nmol/L (KD)21, significantly more potent than that of 25. However, the SPR signal of 25 was found to increase gradually with the increasing concentration in the presence of an excessive dose of 1 (Fig. 4D), indicating that 25 binds with PAK4 in a different manner (allosterically), rather than the catalytic pocket as of compound 1. Taken together, the new compound 13 directly interacts with PAK4 in a non-ATP pocket of the kinase domain.
To further investigate the effects of compound 13 against the PAK4 signaling pathway, Western blot analysis was conducted in the MIA PaCa-2 cell line at different concentrations. As shown in Fig. 5A, the levels of p-PAK4 (the lower band marked with an arrow, Supporting Information Fig. S4) and p-β-Catenin decreased in a dose-dependent manner after treatment of compound 13 with IC50 values of 0.84 and 0.73 μmol/L, respectively against p-PAK4 and p-β-Catenin (Fig. 5B), which were superior to that of compound 4 with IC50 values of 1.89 and 2.07 μmol/L (Supporting Information Fig. S5), respectively, in the same assay. At the concentration of 0.5 μmol/L, the level of p-β-Catenin was lower in the 13-treated group compared to the 4-treated group. Since the WNT/β-Catenin pathway is closely associated with pancreatic cancer progression29,30, we then determined the levels of Cyclin D1 and c-Myc, two target proteins of the WNT/β-Catenin pathway. As shown in Fig. 5C, both the levels of Cyclin D1 and c-Myc decreased with the increasing concentrations of compound 13. Notably, the reduction of c-Myc was more significant after treatment of compound 13 at 1 μmol/L than treatment of 4. These results validated that compound 13 inhibited the WNT/β-Catenin pathway in a dose-dependent manner by targeting PAK4.
To further investigate whether compound 13 induces apoptosis in MIA PaCa-2 cells, flow cytometric analysis together with annexin V-FITC (V) and propidium iodide (PI) staining was conducted to measure the percentage of apoptotic cells after 72 h of treatment. The percentage of total apoptotic cells (annexin V+/PI + cells and annexin V+/PI‒ cells) increased from 2.76% to 25.9% following treatment with 0.5 μmol/L of compound 13, and further increased to 40.3% with concentrates up to 2 μmol/L. These results indicated that compound 13 induced apoptosis in a dose-dependent manner, and was more efficient than 4 at the high concentration (Fig. 6A and B). In the meantime, we examined the expression levels of apoptosis-associated markers BCL-XL and Bim, the key downstream proteins of β-Catenin31,32. As shown in Fig. 6C, the anti-apoptotic protein BCL-XL decreased upon 13-treatment. Conversely, the level of pro-apoptotic protein Bim increased in a concentration-dependent manner. Taken together, these results indicated that compound 13 exhibited anti-proliferative effects against MIA PaCa-2 cells, which was attributed to its effects on promoting apoptosis.
In view of the novel tricyclic skeleton of compound 13 distinct from the bicyclic compound 4, an off-target effect might be a concern. In this regard, we conducted the kinase selectivity study of 13 through the KINOMEscan™ screening platform against a panel of 97 kinases together with their mutants at the concentration of 1 μmol/L. As shown in Fig. 7 and Supporting Information Table S2, compound 13 showed no significant inhibitory effects on all the tested kinases with a percent control as low as 35% [S-score (35) = 0] at the tested concentration. Although the KINOMEscan™ assay is to test the inhibitory effects of compounds against the catalytic activity in the ATP interaction domain of kinases and is not suitable for testing compounds interacting in the allosteric sites of kinase, the results still give useful insights on the good selectivity of compound 13 over other kinases.
To assess the antitumor efficacy of compound 13 in vivo, MIA PaCa-2 cells were implanted into nude mice to establish the xenograft model. As shown in Fig. 8A and B, compound 13 exhibited antitumor efficacy in vivo at a dose of 100 mg/kg with a tumor growth inhibition rate (TGI) of 57.3%, and no mortality and significant body weight loss were observed during the 20-day study period. As a comparison, the antitumor effect of the reference 4 was also tested under the same conditions. Unfortunately, two mice in the 4-treated group at the dose of 100 mg/kg died on Day 18, which might be related to its high plasma exposure and low clearance. The rest of the mice in this group achieved a tumor growth inhibition of 77.8%. Meanwhile, the levels of PAK4 and p-PAK4 were found to be reduced significantly in tumor tissues in the 13-treatment group (Fig. 8D and E). In the tumor tissues, the downstream effector β-Catenin was also decreased (Fig. 8F). These results demonstrated that compound 13 suppressed tumor growth in vivo through inhibition of PAK4.
To further validate the therapeutic potential of compound 13 in pancreatic cancer, the antitumor efficacy was tested in C57BL/6 syngeneic mice bearing the Pan02 cell, another murine pancreatic cancer cell sensitive to compound 13. As shown in Fig. 9A, compound 4 exhibited a modest tumor growth inhibition at the dose of 100 mg/kg by the end of the experiment. However, compound 13 more potently suppressed the tumor growth at the same dose without any observable loss in body weight (Fig. 9B). Subsequently, Western blot analysis of the 13-treatment group revealed a significant reduction of PAK4 and p-PAK4 expressions in tumor tissues (Fig. 9C). Since previous reports have demonstrated a negative correlation between PAK4 levels and immune infiltration20,33, the composition of immune cells in the Pan02 allograft in the 13-treatment group was examined through Cytometry by Time-Of-Flight (CyTOF). As shown in Fig. 9D, treatment with compound 13 led to a significant increase in dendritic cells (DCs) and macrophages, particularly macrophages. Notably, the amount of mature DC cells (MHC II+ DC and CD80+ DC) increased significantly compared to the control group. These results suggested that compound 13 enhanced mature immune cell infiltration in pancreatic cancer. Furthermore, the antitumor CD80+ macrophages were increased, whereas the tumor-promoting CD206+ macrophages remained unaffected in the 13-treated group. Additionally, the amount of immune suppressive myeloid-derived suppressor cells (MDSCs) was found to be decreased slightly in tumor tissue. Intriguingly, the level of T-cell infiltration did not show an increase at the endpoint, indicating that further investigation is needed. Taken together, compound 13 improved infiltration of mature DCs and CD80+ macrophages, and fostered the development of an antitumor immune microenvironment in pancreatic cancer.
The synthesis of tricyclic tetrahydrobenzofuro[2,3-c]pyridine skeleton is conducted according to the previous reports34,35. As shown in Scheme 1, the Suzuki coupling of bromobenzene A1 and 4-fluorobenzeneboronic acid was conducted under Pd(dppf)Cl2 and K3PO4 to deliver the intermediate A2 in 59% yield. Bromination of A2 with NBS gave the bromide A3 in 94% yield. Nucleophilic substitution of A3 with ethyl bromoacetate delivered the ester A4 in 96% yield. Benzoic acid A5 was obtained in 98% yield by treating A4 with an aqueous solution of NaOH. Intramolecular cyclization and decarboxylation of intermediate A5 gave 3-acetoxy-benzofuran A6 in 73% yield. Subsequently, the ester A6 was hydrolyzed in dilute hydrochloric acid to give benzofuran-3-one A7 in 99% yield. A8 was obtained in 63% yield by treating A7 with a phosphorus ylides reagent and sodium hydride. A subsequent reduction reaction of A8 using a borane-tetrahydrofuran complex provided the key intermediate A9 in 53% yield. Next, treatment of amine A9 with an appropriate aldehyde or ketone furnished the tricyclic tetrahydrobenzofuro[2,3-c]pyridine products A10A15 through a Mannich reaction at 50 ℃ or 140 ℃ in acidic solvents, respectively. Due to the poor solubility and the difficulty in isolation of the tricyclic compounds A10A15, the crude products were directly subjected to NH-protection with bis (tert-butoxycarbonyl)oxide to generate compounds A16A21 in 24%–58% yields over two steps. The Suzuki coupling of bromides A16A21 with appropriate boronic esters under Pd (PPh3)4 and K2CO3 delivered precursors A22A27 in 30%–61% yields. Subsequent Boc-deprotection with trifluoroacetic acid followed by condensation with (2E)-3-(6-amino-3-pyridinyl)-2-propenoic acid in the presence of HATU and DIPEA provided the target compounds 611 in 18%–32% yield over two steps.
The synthesis of compounds 1229 is described in Scheme 2. A coupling reaction of A16 with bis(pinacolato)diboron delivered the borate A28 in 47% yield. Subsequent Suzuki coupling with various halogenated aryl or heteroaryl K8K14 in the presence of Pd (PPh3)4 and K2CO3 delivered intermediates A29A35 in 43%–83% yields. The target compounds 1218 were obtained in 23%–46% yields by following similar procedures as that for compounds 611 over two steps. The synthesis of compounds 1929 is outlined in Scheme 2. Suzuki coupling of boronic ester A28 with variously substituted pyridazinyl chlorides K15K25 yielded the corresponding intermediates A36A46 in 35%–87% yields. Removal of the N–Boc followed by condensation with (2E)-3-(6-amino-3-pyridinyl)-2-propenoic acid in the presence of HATU and DIPEA in DMF provided compounds 1929 in 18%–57% yields over two steps.
The synthesis of compounds 3038 is described in Scheme 3. Bromination of phenol A47 with NBS provided bromide A48 in 96% yield, which was then subjected to nucleophilic substitution with ethyl bromoacetate to give A49 in 98% yield. Benzoic acid A50 was obtained in 96% yield by treating A49 with NaOH aqueous solution. Intramolecular cyclization and decarboxylation of intermediate A50 gave 3-acetoxy-benzofuran A51 in 43% yield. Subsequently, the ester A51 was hydrolyzed in dilute hydrochloric acid to give benzofuran-3-one A52 in 98% yield. Nitrile A53 was obtained in 62% yield by treating A52 with a phosphorus ylide-diethyl cyanomethylphosphonate and sodium hydride. Borane reduction of A53 in refluxing THF provided amine A54 in 51% yield. Mannich reaction of amine A54 and formaldehyde yielded the tricyclic A55, which was N-Boc protected to give A56 in 40% overall yield. The key intermediate A58 was obtained in 47% overall yield via treatment of A56 with bis(pinacolato) diboron followed by Suzuki coupling with substituted pyridazinyl chlorides K21 in the presence of Pd (PPh3)4 and K2CO3. Subsequent Suzuki coupling of chloride A58 with various boronic esters under the catalysis of Pd2(dba)3 in the presence of Cs2CO3 in the microwave at 140 ℃ yielded final compounds A59A66 in 19%–82% yields. Finally, N-Boc-deprotection of A58A66 and subsequent amide condensation with (2E)-3-(6-amino-3-pyridinyl)-2-propenoic acid in the presence of HATU and DIPEA formed target compounds 3038 in 21%–42% overall yields in two steps.
The synthesis of the probe compound 39 is described in Scheme 4. Suzuki coupling of boronic ester A28 with methyl 6-bromonicotinate in the presence of Pd (PPh3)4 and K2CO3 delivered A67 in 65% yield. Boc-deprotection of A67 with trifluoroacetic acid followed by condensation with (2E)-3-(6-amino-3-pyridinyl)-2-propenoic acid in the presence of HATU and DIPEA afforded pyridinyl ester A68 in 62% yield over two steps. Hydrolysis of A68 in LiOH gave acid A69 followed by condensation with 2-(3-(but-3-yn-1-yl)-3H-diazirin-3-yl)ethan-1-amine to give the target compound 39 in 44% yield over two steps.
Due to its oncogenic and tumor immunomodulatory properties, PAK4 has become a promising therapeutic target for various tumors. Many small molecule PAK4 inhibitors have been disclosed, but poor antitumor efficacy and adverse safety events in vivo have restricted their further development. The development of allosteric inhibitors represented by KPT-9274 (4) raised new prospects for PAK4-targeting therapies. Inspired by the interaction mode of 4, we conducted a scaffold hopping strategy by converting the bicyclic core of 4 into a novel tricyclic core featuring a tetrahydrobenzofuro[2,3-c]pyridine skeleton. Further elaboration of other structural elements of the tricyclic skeleton resulted in compound 13 exhibiting favorable PK properties and higher potency against MIA PaCa-2 and Pan02 cell lines. Furthermore, compound 13 directly binds to the non-ATP pocket of the PAK4 kinase domain, and dose-dependently decreases the expression of p-PAK4 and its downstream effector p-β-Catenin, leading to inhibition of the WNT/β-Catenin signaling pathway. Additionally, compound 13 induced apoptosis in the MIA PaCa-2 cell lines in a dose-dependent manner. In the MIA PaCa-2 xenograft model, compound 13 displayed antitumor efficacy with a good safety index. Meanwhile, significant tumor growth inhibition was also observed in the Pan02 mice model, and the antitumor efficacy was associated with enhanced immune infiltration and immune activation in tumor tissue. Therefore, compound 13 is a novel PAK4 allosteric inhibitor with antitumor efficacy in vivo and with a good safety index, thus representing a new structural mode for further profiling. It is of note that the clinical compound 4 is also active against other targets (e.g., NAMPT)28, which might partially contribute to its antitumor efficacy, more profound investigations of compound 13 on both the selectivity in a wider range of targets and the detailed mechanism of action are necessary. These results will be reported in due course.
All commercially available starting materials and solvents are of reagent grade and used without further purification (Reagents and solvents were obtained from Sinopharm Chemical Reagent Co., Ltd., Shanghai; Bide Pharmatech Ltd., Shanghai; Shanghai Macklin Biochemical Technology Co., Ltd.). Column chromatography was performed using a 300‒400 mesh or 200‒300 mesh silica gel. Analytical TLC was carried out employing 60 F254 plates, and spots were visualized using UV (254 or 365 nm). 1H and 13C NMR spectra were recorded with the Varian-III 400 MHz NMR, Varian-III 500 MHz NMR, Varian-III 600 MHz NMR or Varian-NEO 700 MHz NMR spectrometer. Chemical shifts (δ) were reported in ppm downfield from an internal TMS standard, and J values were given in Hz. High-resolution mass spectra were obtained from acquity UPLC/QTOF premier mass spectrometer. HPLC spectrum was recorded for all bioassay compounds on an Agilent Technologies 1260 series LC system (Agilent Chem-StationRev.A.10.02; ZORBAX-C18, 4.6 mm × 150 mm, 5 μm) with ultraviolet wavelength (UV 254 nm). The purities of these compounds (except for compound 10) were above 95%.
Methyl 4-fluoro-2-hydroxy-[1,1-biphenyl]-3-carboxylate (A2). To a solution of A1 (60 g, 260 mmol) and 4-fluorobenzeneboronic acid (40 g, 286 mmol) in DMF (120 mL) and H2O (60 mL) was added Pd(dppf)Cl2 (9.6 g, 12.8 mmol) and K3PO4 (165 g, 779 mmol). The mixture was stirred at 45 ℃ for 4 h under a nitrogen atmosphere, and then poured into water. The suspension was filtered to give intermediate A2 as a yellow solid (38 g, 59% yield). 1H NMR (400 MHz, CDCl3) δ 11.30 (s, 1H), 7.85 (d, J = 7.9 Hz, 1H), 7.54 (dd, J = 8.3, 5.7 Hz, 2H), 7.48 (d, J = 7.2 Hz, 1H), 7.11 (t, J = 8.6 Hz, 2H), 6.94 (t, J = 7.8 Hz, 1H), 3.96 (s, 3H).
Methyl 5-bromo-4-fluoro-2-hydroxy-[1,1-biphenyl]-3-carboxylate (A3). To a solution of A2 (38 g, 154 mmol) in acetonitrile (150 mL) was added NBS (30 g, 169 mmol). The mixture was stirred at 60 ℃ for 4 h under nitrogen atmospheres, and then cooled to room temperature and poured into ice water. The suspension was filtered to give intermediate A3 as a yellow solid (47 g, 94% yield). 1H NMR (400 MHz, CDCl3) δ 11.24 (s, 1H), 7.96 (d, J = 2.5 Hz, 1H), 7.58 (d, J = 2.1 Hz, 1H), 7.51 (dd, J = 8.9, 5.4 Hz, 2H), 7.11 (t, J = 8.8 Hz, 2H), 3.97 (s, 3H).
Methyl 5-bromo-2-(2-ethoxy-2-oxoethoxy)-4-fluoro-[1,1-biphenyl]-3-carboxylate (A4). To a solution of A3 (47 g, 145 mmol) in acetone (200 mL) was added ethyl bromoacetate (29 g, 174 mmol) and K2CO3 (60 g, 434 mmol). The mixture was heated to reflux for 4 h and then the solvent was removed in vacuo. The residue was dissolved in ethyl acetate, washed with water and brine, dried over NaSO4, and concentrated in vacuo to give A4 as a yellow oil (57 g, 96% yield). 1H NMR (400 MHz, CDCl3) δ 7.87 (d, J = 2.5 Hz, 1H), 7.59 (d, J = 2.6 Hz, 1H), 7.58–7.51 (m, 2H), 7.12 (t, J = 8.7 Hz, 2H), 4.17–4.10 (m, 4H), 3.91 (s, 3H), 1.20 (t, J = 7.1 Hz, 3H).
5-Bromo-2-(carboxymethoxy)-4-fluoro-[1,1-biphenyl]-3-carboxylic acid (A5). A4 (57 g, 139 mmol) was added to a mixture of ethanol (300 mL) and 1 mol/L sodium hydroxide solution (300 mL). The reaction mixture was heated to 90 ℃ for 6 h, and then cooled to room temperature. The excessive ethanol was removed in vacuo, and the pH value of the solution was adjusted to 3-4 by the addition of 1 mol/L HCl aqueous solution. The suspension was filtered to give A5 as a white solid (50 g, 98% yield). 1H NMR (600 MHz, CDCl3) δ 13.36 (s, 2H), 7.79 (d, J = 2.6 Hz, 1H), 7.69 (d, J = 2.6 Hz, 1H), 7.60 (dt, J = 18.7, 11.1 Hz, 2H), 7.29 (t, J = 8.9 Hz, 2H), 4.08 (s, 2H).
5-Bromo-7-(4-fluorophenyl)benzofuran-3-yl acetate (A6). To a solution of A5 (50 g, 135 mmol) in a mixture of acetic acid (350 mL) and acetic anhydride (350 mL), sodium acetate (37 g, 271 mmol) was added. The mixture was heated to 130 ℃ overnight and then cooled to room temperature, diluted with water, and extracted with a mixture of PE and EA (VPE: VEA = 1:1). The organic phase was washed three times with aqueous NaHCO3, dried over Na2SO4, and concentrated in vacuo to give A6 as a white solid (34.4 g, 73% yield). 1H NMR (400 MHz, CDCl3) δ 8.07 (s, 1H), 7.78 (dd, J = 8.5, 5.3 Hz, 2H), 7.67 (s, 1H), 7.55 (s, 1H), 7.19 (t, J = 8.6 Hz, 2H), 2.39 (s, 3H).
5-Bromo-7-(4-fluorophenyl)benzofuran-3(2H)-one (A7). To a solution of A6 (34.4 g, 98.5 mmol) in MeOH (300 mL) was added 1 mol/L HCl aqueous solution (180 mL). The mixture was heated to 90 ℃ for 3 h, and then cooled to room temperature, diluted with water, and extracted with ethyl acetate. The organic phase was washed with brine, dried over Na2SO4, and concentrated in vacuo to give A7 as a brown solid (29.8 g, 99% yield). 1H NMR (600 MHz, CDCl3) δ 7.80 (d, J = 2.1 Hz, 1H), 7.77 (d, J = 2.1 Hz, 1H), 7.70–7.65 (m, 2H), 7.20–7.16 (m, 2H), 4.73 (s, 2H).
2-(5-Bromo-7-(4-fluorophenyl)benzofuran-3-yl)acetonitrile (A8). To a solution of diethyl cyanomethylphosphonate (15.7 mL, 97.1 mmol) in THF (90 mL) was added NaH (4.7 g, 116 mmol) slowly at 0 ℃. The mixture was stirred at 0 ℃ for 30 min, and a solution of A7 (29.8 g, 97.1 mmol) in THF (100 mL) was added. The mixture was stirred overnight, and then diluted with water and extracted with ethyl acetate. The organic phase was washed with brine, dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford A8 as a pink solid (20.1 g, 63% yield). 1H NMR (400 MHz, CDCl3) δ 7.81–7.71 (m, 3H), 7.68 (d, J = 1.7 Hz, 1H), 7.59 (d, J = 1.7 Hz, 1H), 7.20 (t, J = 8.6 Hz, 2H), 3.77 (s, 2H).
2-(5-Bromo-7-(4-fluorophenyl)benzofuran-3-yl)ethan-1-amine (A9). To a solution of A8 (20.1 g, 60.9 mmol) in THF (60 mL) was added 122 mL B2H6 (1 mol/L in THF) at 0 ℃. The mixture was stirred for 20 min, and then heated to 60 ℃ for 3 h and cooled to room temperature. The mixture was quenched with methanol and evaporated in vacuo. The residue was dissolved in ethyl acetate, washed with brine, dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford A9 as a yellow oil (10.8 g, 53% yield). 1H NMR (400 MHz, CDCl3) δ 7.76 (dd, J = 8.6, 5.4 Hz, 2H), 7.63 (d, J = 1.9 Hz, 1H), 7.51 (d, J = 5.6 Hz, 2H), 7.16 (t, J = 8.6 Hz, 2H), 3.04 (t, J = 6.2 Hz, 2H), 2.80 (t, J = 6.4 Hz, 2H).
General procedure A for preparation of compounds A10A13.To a solution of A9 (0.30 mmol, 1 eq.) in formic acid (2 mL) was added aldehyde (0.33 mmol, 1.1 eq.). The mixture was heated to 50-90 ℃ for 1.5 h and then cooled to room temperature. The pH value of the solution was adjusted to 7-8 by the addition of 1 mol/L NaOH aqueous solution. The mixture was extracted with ethyl acetate, washed with brine, dried over Na2SO4, and concentrated in vacuo to give the crude products A10A13 without further purification.
General procedure B for preparation of compounds A14A15. To a solution of A9 (0.30 mmol, 1 eq.) in a mixture of toluene (2 mL) and trifluoroacetic acid (1.50 mmol, 5 eq.), was added ketone (3.00 mmol, 10 eq.). The mixture was heated to 140 ℃ for 4 h in the microwave, and then cooled to room temperature. The pH was adjusted to 7-8 by the addition of 1 mol/L NaOH aqueous solution. The mixture was extracted with ethyl acetate, washed with brine, dried over Na2SO4, and concentrated in vacuo to give the crude product A14A15 without further purification.
General procedure C for preparation of compounds A16A21. To a solution of the crude product A10A15 obtained above (0.30 mmol, 1 eq.) in DCM (5 mL), were added di-tert butyl decarbonate (0.45 mmol, 1.5 eq.) and N,N-diisopropylethylamine (0.60 mmol, 2 eq.) at 0 ℃. The mixture was stirred overnight, diluted with ethyl acetate, and washed with brine. The organic layer was dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to give compounds A16A21.
Tert-butyl 6-bromo-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A16). White solid, 24% yield over two steps. 1H NMR (400 MHz, CDCl3) δ 7.79–7.73 (m, 2H), 7.53 (s, 1H), 7.46 (d, J = 1.9 Hz, 1H), 7.22–7.15 (m, 2H), 4.61 (s, 2H), 3.83–3.70 (m, 2H), 2.75–2.67 (m, 2H), 1.50 (s, 9H).
Tert-butyl 6-bromo-8-(4-fluorophenyl)-1-methyl-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A17). White solid, 48% yield over two steps. 1H NMR (400 MHz, CDCl3) δ 7.80–7.71 (m, 2H), 7.52 (s, 1H), 7.46 (d, J = 1.9 Hz, 1H), 7.23–7.15 (m, 2H), 5.24 (d, J = 42.1 Hz, 1H), 4.40 (d, J = 42.1 Hz, 1H), 3.08 (s, 1H), 2.82–2.69 (m, 1H), 2.60 (d, J = 15.4 Hz, 1H), 1.50 (s, 9H), 1.48 (d, J = 6.7 Hz, 3H).
Tert-butyl 6-bromo-8-(4-fluorophenyl)-1-(methoxymethyl)-3,4-dihydrobenzofuro[2,3-c]pyridi-ne-2(1H)-carboxylate (A18). White solid, 58% yield over two steps. 1H NMR (400 MHz, CDCl3) δ 7.80–7.73 (m, 2H), 7.53 (s, 1H), 7.47 (s, 1H), 7.23–7.15 (m, 2H), 5.48–5.18 (m, 1H), 4.64–4.26 (m, 1H),3.88–3.69 (m, 2H), 3.35 (s, 3H), 3.33–3.14 (m, 1H), 2.83–2.56 (m, 2H), 1.50 (s, 9H).
Tert-butyl 6-bromo-1-cyclopropyl-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A19). White solid, 44% yield over two steps. 1H NMR (400 MHz, CDCl3) δ 7.82–7.74 (m, 2H), 7.53 (s, 1H), 7.49 (d, J = 2.0 Hz, 1H), 7.23–7.16 (m, 2H), 4.90–4.21 (m, 2H), 3.25 (s, 1H),2.82–2.69 (m, 1H), 2.66–2.57 (m, 1H), 1.53 (s, 9H), 0.70–0.60 (m, 4H), 0.57–0.50 (m, 1H).
Tert-butyl 6-bromo-8-(4-fluorophenyl)-1,1-dimethyl-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H) -carboxylate (A20). White solid, 25% yield over two steps.1H NMR (400 MHz, Chloroform-d) δ 7.81–7.73 (m, 2H), 7.52 (s, 1H), 7.48 (s, 1H), 7.23–7.13 (m, 2H), 3.80 (t, J = 5.3 Hz, 2H), 2.67 (t, J = 5.4 Hz, 2H), 1.78 (s, 6H), 1.53 (s, 9H).
Tert-butyl 6-bromo-8-(4-fluorophenyl)-3,4-dihydro-2H-spiro[benzofuro[2,3-c]pyridine-1,1-cy-clobutane]-2-carboxylate (A21). White solid, 51% yield over two steps. 1H NMR (400 MHz, CDCl3) δ 7.88–7.80 (m, 2H), 7.49 (s, 2H), 7.24–7.16 (m, 2H),3.67 (t, J = 5.7 Hz, 2H), 2.92 (dt, J = 12.1, 9.8 Hz, 2H), 2.69 (t, J = 5.7 Hz, 2H), 2.59–2.48 (m, 2H), 2.24–2.08 (m, 1H),1.98–1.84 (m, 1H), 1.53 (s, 9H).
General procedure D for preparation of compounds A22A27. To a solution of A16A21 (0.10 mmol, 1 eq.) in a mixture of 1,4-dioxane (0.9 mL) and H2O (0.3 mL) was added K3(0.15 mmol, 1.5 eq.), Pd (PPh3)4 (0.01 mmol, 1 eq.) and K2CO3 (0.25 mmol, 1 eq.). The mixture was refluxed for 2 h under nitrogen. The mixture was cooled to room temperature, and extracted with ethyl acetate. The organic layer was washed with brine, dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford compounds A22A27.
Tert-butyl 6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorophenyl)-3,4-dihydroben-zofuro[2,3-c]pyridine-2(1H)-carboxylate (A22). White solid (45% yield).1H NMR (400 MHz, CDCl3) δ 7.87–7.81 (m, 2H), 7.74–7.69 (m, 2H), 7.60 (s, 1H), 7.56 (d, J = 1.8 Hz, 1H), 7.54–7.50 (m, 2H), 7.25–7.18 (m, 2H),4.64 (s, 2H), 4.07–3.51 (m, 6H), 2.80 (s, 2H), 2.20–1.96 (m, 4H),1.51 (s, 9H).
Tert-butyl 6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorophenyl)-1-methyl-3,4-di-hydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A23). White solid (38% yield).1H NMR (400 MHz, CDCl3) δ 7.87–7.81 (m, 2H), 7.71 (d, J = 7.8 Hz, 2H), 7.60 (s, 1H), 7.56 (d, J = 1.9 Hz, 1H), 7.52 (d, J = 7.8 Hz, 2H), 7.24–7.17 (m, 2H), 5.48–5.14 (m, 1H), 4.60–4.22 (m, 1H),3.98–3.60 (m, 4H), 3.12 (s, 1H), 2.91–2.59 (m, 2H), 2.11–1.99 (m, 4H), 1.50 (d, J = 6.4 Hz, 12H).
Tert-butyl 6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorophenyl)-1-(methoxymet-hyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A24). White solid (61% yield). 1H NMR (400 MHz, CDCl3) δ 7.88–7.81 (m, 2H), 7.73–7.68 (m, 2H), 7.60 (s, 1H), 7.58–7.55 (m, 1H), 7.53–7.49 (m, 2H), 7.25–7.17 (m, 2H), 5.52–5.23 (m, 1H), 4.65–4.31 (m, 1H),3.99–3.57 (m, 6H), 3.36 (s, 3H), 3.36–3.26 (m, 1H), 2.91–2.64 (m, 2H), 2.16–1.93 (m, 4H), 1.51 (s, 9H).
Tert-butyl 1-cyclopropyl-6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A25). White solid (48% yield). 1H NMR (400 MHz, CDCl3) δ 7.90–7.83 (m, 2H), 7.71 (d, J = 7.8 Hz, 2H), 7.63–7.57 (m, 2H), 7.51 (d, J = 7.9 Hz, 2H), 7.25–7.18 (m, 2H), 4.92–4.27 (m, 2H), 3.96–3.60 (m, 4H), 3.29 (s, 1H), 2.90–2.66 (m, 2H), 2.17–1.90 (m, 4H), 1.49 (s, 9H), 0.74–0.62 (m, 4H), 0.61–0.49 (m, 1H).
Tert-butyl 6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorophenyl)-1,1-dimethyl-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A26). White solid (61% yield). 1H NMR (400 MHz, CDCl3) δ 7.87–7.80 (m, 2H), 7.70 (d, J = 7.7 Hz, 2H), 7.59 (d, J = 1.7 Hz, 1H), 7.56 (d, J = 1.8 Hz, 1H), 7.50 (d, J = 7.8 Hz, 2H), 7.23–7.16 (m, 2H), 3.97–3.50 (m, 6H), 2.74 (t, J = 5.3 Hz, 2H), 2.16–1.92 (m, 4H), 1.79 (s, 6H), 1.53 (s, 9H).
Tert-butyl 6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorophenyl)-3,4-dihydro-2H-spiro[benzofuro[2,3-c]pyridine-1,1-cyclobutane]-2-carboxylate (A27). White solid (30% yield).1H NMR (400 MHz, CDCl3) δ 7.95–7.88 (m, 2H), 7.72 (d, J = 7.8 Hz, 2H), 7.60 (s, 1H), 7.58 (d, J = 1.9 Hz, 1H), 7.52 (d, J = 7.8 Hz, 2H), 7.25–7.18 (m, 2H), 3.96–3.46 (m, 6H),3.01–2.89 (m, 2H), 2.77 (t, J = 5.5 Hz, 2H), 2.62–2.53 (m, 2H),2.27–2.15 (m, 1H), 2.11–1.86 (m, 5H), 1.47 (s, 9H).
General procedure E for preparation of compounds 611. To a solution of A22A27 (0.08 mmol, 1 eq.) in DCM (2 mL) was added TFA (1 mL). The mixture was stirred for 1 h at room temperature and then evaporated in vacuo. The residue was dissolved in DMF (1 mL), and (2E)-3-(6-amino-3-pyridinyl)-2-propenoic acid (0.12 mmol, 1.5 eq.), HATU (0.16 mmol, 2 eq.), and DIPEA (0.24 mmol, 3 eq.) were added. The mixture was stirred overnight, diluted with ethyl acetate, and washed with brine. The organic layer was dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford compounds 611.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorop-henyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (6). White solid (32% yield).1H NMR (500 MHz, CD3OD) δ 8.09 (s, 1H), 7.93–7.85 (m, 3H), 7.77 (d, J = 8.2 Hz, 2H), 7.69 (s, 1H), 7.63 (s, 1H), 7.58–7.48 (m, 3H), 7.22 (t, J = 8.7 Hz, 2H), 7.04 (dd, J = 37.5, 15.3 Hz, 1H), 6.63 (d, J = 8.0 Hz, 1H), 4.97–4.83 (m, 2H), 4.04 (t, J = 5.1 Hz, 2H), 3.97–3.52 (m, 4H), 2.86 (d, J = 21.4 Hz, 2H),2.06 (s, 4H). 13C NMR (126 MHz, CD3OD) δ 172.6, 169.0, 164.0 (d, J = 246.2 Hz), 161.6, 153.1, 152.1, 149.7, 144.6, 142.0, 137.5, 137.3, 135.0, 133.6, 131.7, 131.6, 130.5, 128.7 (2C), 128.6 (2C),125.8, 123.8, 122.9 (t, J = 241.8 Hz), 121.8, 117.7, 116.5, 116.4, 114.4, 113.7, 110.6, 44.8, 42.2, 41.3, 40.3, 35.7–34.2 (m, 2C),22.0 (d, J = 160.2 Hz). HR-MS (ESI) Calcd. for C37H32O3N4F3+ [M+H]+, 637.2421; Found, 637.2413; purity, 97.7%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorop-henyl)-1-methyl-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (7). White solid (19% yield). 1H NMR (500 MHz, CDCl3) δ 8.23 (s, 1H), 7.84 (s, 2H), 7.76–7.56 (m, 6H), 7.51 (dd, J = 8.1, 2.1 Hz, 2H), 7.25–7.16 (m, 2H), 6.77 (dd, J = 32.1, 15.0 Hz, 1H),6.54–6.48 (m, 1H), 5.91 (s, 0.5H), 5.36–4.98 (m, 1H), 4.83 (d, J = 43.6 Hz, 2H), 4.33 (s, 0.5H), 4.02–3.60 (m, 4H), 3.55 (s, 0.5H), 3.10 (s, 0.5H), 2.97–2.72 (m, 2H), 2.03 (s, 4H), 1.62 (d, J = 49.8 Hz, 3H). 13C NMR (126 MHz, CDCl3) δ 170.6, 166.1 (d, J = 44.6 Hz), 162.8 (d, J = 247.8 Hz), 159.3 (d, J = 10.8 Hz),155.6, 154.0, 151.8, 149.4 (d, J = 19.5 Hz), 143.4, 140.8 (d, J = 25.5 Hz), 136.1, 133.9, 132.2, 130.5, 130.4, 129.2, 127.8 (2C), 127.7 (2C), 124.9, 123.2 (d, J = 14.6 Hz), 121.7 (t, J = 242.6 Hz), 116.8 (d, J = 49.2 Hz), 115.9, 115.8, 113.7 (d, J = 104.2 Hz), 111.3, 108.8, 49.4, 46.5, 39.9, 36.0, 35.2–33.6 (m, 2C), 21.8 (d, J = 163.1 Hz), 18.5 (d, J = 206.0 Hz). HR-MS(ESI) Calcd. for C38H34O3N4F3+ [M+H]+, 651.2578; Found, 651.2574; purity, 98.1%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorop-henyl)-1-(methoxymethyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (8). White solid (24% yield). 1H NMR (500 MHz, CDCl3) δ 8.23 (d, J = 20.5 Hz, 1H), 7.84 (s, 2H), 7.74–7.55 (m, 6H), 7.52 (d, J = 8.2 Hz, 2H), 7.22 (t, J = 8.6 Hz, 2H), 6.91 (dd, J = 56.2, 15.4 Hz, 1H), 6.53 (t, J = 7.1 Hz, 1H), 5.97 (s, 0.5H), 5.39 (s, 0.5H), 5.09 (d, J = 9.5 Hz, 0.5H), 4.77 (s, 2H), 4.38 (d, J = 13.2 Hz, 0.5H), 4.02–3.86 (m, 3H), 3.85–3.73 (m, 2H),3.72–3.67 (m, 0.5H), 3.67–3.48 (m, 1H), 3.40 (d, J = 46.5 Hz, 3H), 3.22–3.14 (m, 0.5H), 2.97–2.72 (m, 2H), 2.15–1.94 (m, 4H). 13C NMR (126 MHz, CDCl3) δ 170.62, 167.0 (d, J = 125.4 Hz), 162.8 (d, J = 247.7 Hz), 159.1 (d, J = 14.2 Hz),152.0, 151.8, 150.2, 149.3, 143.4 (d, J = 29.5 Hz), 140.4 (d, J = 89.3 Hz), 136.2, 134.0, 132.2, 130.5, 130.4, 129.2 (d, J = 21.0 Hz), 127.8 (2C), 127.7 (2C), 125.0, 123.4 (d, J = 45.8 Hz), 121.9 (d, J = 23.8 Hz), 121.7 (t, J = 242.6 Hz),116.9 (d, J = 48.3 Hz), 115.9, 115.8, 115.3, 113.8 (d, J = 81.0 Hz), 108.8, 73.2, 59.6 (d, J = 28.5 Hz), 54.4, 50.5, 42.3, 36.9, 35.1–33.5 (m, 2C), 21.6 (d, J = 170.6 Hz). HR-MS (ESI) Calcd. for C39H36O4N4F3+ [M+H]+, 681.2683; Found, 681.2693; purity, 95.3%.
(E)-3-(6-Aminopyridin-3-yl)-1-(1-cyclopropyl-6-(4-(4,4-difluoropiperidine-1-carbonyl)pheny-l)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (9). White solid (29% yield). 1H NMR (500 MHz, CD3OD) δ 8.11 (s, 1H), 7.98–7.90 (m, 3H), 7.82 (d, J = 8.2 Hz, 2H), 7.75 (s, 1H), 7.70 (s, 1H), 7.60–7.52 (m, 3H), 7.27 (t, J = 8.7 Hz, 2H), 7.16–6.97 (m, 1H), 6.68–6.61 (m, 1H), 5.27 (d, J = 7.7 Hz, 0.5H), 5.15–4.97 (m, 0.5H), 4.90–4.86 (m, 0.5H), 4.60 (d, J = 14.2 Hz, 0.5H), 3.97–3.53 (m, 5H), 2.94–2.82 (m, 2H), 2.08 (s, 4H), 0.95–0.49 (m, 5H). 13C NMR (126 MHz, CD3OD) δ 172.7, 168.5, 164.1 (d, J = 246.3 Hz), 161.6, 154.7, 153.0, 149.6, 144.7, 142.0, 137.5, 137.3, 135.0, 133.6 (d, J = 3.3 Hz), 131.6, 131.5, 130.4, 128.7 (2C), 128.6 (2C), 125.8, 123.9, 122.9, 121.8, 117.9, 116.6, 116.4, 114.7, 113.7, 110.7, 55.6, 41.8, 35.7–34.1 (m, 2C), 23.1, 15.1, 3.8, 3.2. HR-MS (ESI) Calcd. for C40H36O3N4F3+ [M+H]+, 677.2734; Found, 677.2738; purity, 96.6%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorop-henyl)-1,1-dimethyl-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (10). White solid (18% yield). 1H NMR (500 MHz, CD3OD) δ 8.09 (d, J = 2.1 Hz, 1H), 7.95–7.90 (m, 2H), 7.88 (dd, J = 8.8, 2.3 Hz, 1H), 7.83 (d, J = 8.3 Hz, 2H), 7.76 (d, J = 1.7 Hz, 1H), 7.69 (d, J = 1.8 Hz, 1H), 7.57 (d, J = 8.3 Hz, 2H), 7.40 (d, J = 15.5 Hz, 1H), 7.27 (t, J = 8.8 Hz, 2H), 6.96 (d, J = 15.5 Hz, 1H), 6.64 (d, J = 8.8 Hz, 1H), 3.95–3.58 (m, 6H), 2.92 (t, J = 5.2 Hz, 2H),2.08 (s, 4H), 1.91 (s, 6H). 13C NMR (126 MHz, CD3OD) δ 172.7, 171.2, 164.0 (d, J = 246.4 Hz), 161.5, 159.6, 152.7, 149.4, 144.7, 140.2, 137.4, 137.3, 135.0, 133.7, 131.5 (2C), 130.6, 128.7 (2C),128.6 (2C), 125.8, 123.9, 122.9 (t, J = 241.6 Hz), 121.9, 119.0, 117.9, 116.7, 116.5, 112.8, 110.6, 59.7, 44.8, 25.0 (2C), 22.4. HR-MS (ESI) Calcd. for C39H34O3N4F3- [M-H]-, 663.2588; Found, 663.2581; purity, 93.7%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(4-(4,4-difluoropiperidine-1-carbonyl)phenyl)-8-(4-fluorop-henyl)-3,4-dihydro-2H-spiro[benzofuro[2,3-c]pyridine-1,1-cyclobutan]-2-yl)prop-2-en-1-one (11). White solid (20% yield). 1H NMR (600 MHz, CDCl3) δ 8.20 (d, J = 2.0 Hz, 1H), 7.95–7.89 (m, 2H), 7.70 (d, J = 8.1 Hz, 2H), 7.63 (dd, J = 8.6, 2.1 Hz, 1H), 7.59 (d, J = 1.6 Hz, 1H), 7.54–7.49 (m, 4H), 7.23 (t, J = 8.7 Hz, 2H), 6.73 (d, J = 15.4 Hz, 1H), 6.50 (d, J = 8.6 Hz, 1H), 4.77 (s, 2H),4.02–3.51 (m, 6H), 2.98–2.88 (m, 2H), 2.80 (t, J = 5.6 Hz, 2H), 2.73 (t, J = 9.4 Hz, 2H), 2.30–2.19 (m, 1H), 2.17–1.96 (m, 5H). 13C NMR (151 MHz, CDCl3) δ 170.7, 169.4, 162.7 (d, J = 247.5 Hz), 159.2, 158.4, 151.3, 149.3, 143.6, 139.9, 136.2, 136.1, 133.8, 132.4 (d, J = 3.1 Hz), 130.4, 130.3, 129.6, 127.8 (2C), 127.7 (2C), 124.8, 122.8, 121.7, 121.7 (t, J = 242.8 Hz),116.5 (2C), 115.9, 115.8, 110.2, 108.7, 60.2, 42.3, 34.1 (2C), 22.6, 15.0. HR-MS (ESI) Calcd. for C40H36O3N4F3+ [M+H]+,677.2734; Found, 677.2729; purity, 98.6%.
Tert-butyl 8-(4-fluorophenyl)-6-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-3,4-dihydroben-zofuro[2,3-c]pyridine-2(1H)-carboxylate (A28). To a solution of A16 (5.9 g, 13.3 mmol) in 1,4-dioxane (100 mL) was added KOAc (3.9 g, 39.8 mmol), PdCl2(dppf) (485 mg, 0.66 mmol), and bis(pinacolato)diboron (4 g, 15.9 mmol). The mixture was refluxed for 3 h and then cooled to room temperature, diluted with water, and extracted with ethyl acetate. The organic layer was washed with brine, dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford A28 as a white solid (3.5 g, 47% yield). 1H NMR (400 MHz, CDCl3) δ 7.90 (s, 1H), 7.86–7.78 (m, 3H), 7.21–7.13 (m, 2H), 4.61 (s, 2H), 3.77 (s, 2H), 2.76 (s, 2H), 1.50 (s, 9H), 1.38 (s, 12H).
General procedure F for preparation of A29A35. To a solution of A28 (0.10 mmol, 1 eq.) in a mixture of 1,4-dioxane (0.9 mL) and H2O (0.3 mL) was added K2K8 (0.15 mmol, 1.5 eq.), Pd (PPh3)4 (0.01 mmol, 1 eq.) and K2CO3 (0.25 mmol, 1 eq.). The mixture was refluxed for 2 h under nitrogen, and then cooled to room temperature and extracted with ethyl acetate. The combined organic layer was washed with brine, dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford compounds A29A35.
Tert-butyl 6-(4-(4,4-difluoropiperidine-1-carbonyl)-2-fluorophenyl)-8-(4-fluorophenyl)-3,4-di-hydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A29). White solid (43% yield). 1H NMR (400 MHz, CDCl3) δ 7.86–7.80 (m, 2H), 7.62–7.55 (m, 2H), 7.51 (s, 1H), 7.32–7.24 (m, 2H), 7.23–7.16 (m, 2H),4.69–4.60 (m, 2H), 4.01–3.55 (m, 6H), 2.79 (s, 2H), 2.15–1.87 (m, 4H), 1.51 (s, 9H).
Tert-butyl 6-(5-(4,4-difluoropiperidine-1-carbonyl)pyridin-2-yl)-8-(4-fluorophenyl)-3,4-dihyd-robenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A30). White solid (52% yield).1H NMR (400 MHz, CDCl3) δ 8.78–8.75 (m, 1H), 8.09 (d, J = 1.8 Hz, 1H), 8.04 (s, 1H), 7.93–7.83 (m, 4H), 4.64 (s, 2H), 4.02–3.61 (m, 6H), 2.82 (s, 2H), 2.20–1.92 (m, 4H), 1.51 (s, 9H).
Tert-butyl 6-(6-(4,4-difluoropiperidine-1-carbonyl)pyridin-3-yl)-8-(4-fluorophenyl)-3,4-dihydr-obenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A31). White solid (83% yield).1H NMR (400 MHz, CDCl3) δ 8.88 (d, J = 2.2 Hz, 1H), 8.07 (dd, J = 8.1, 2.1 Hz, 1H), 7.87–7.78 (m, 3H), 7.61 (s, 1H), 7.55 (d, J = 1.7 Hz, 1H), 7.24–7.18 (m, 2H), 4.65 (s, 2H), 3.94 (t, J = 5.8 Hz, 2H),3.86–3.76 (m, 4H), 2.81 (s, 2H), 2.22–2.06 (m, 4H), 1.51 (s, 9H).
Tert-butyl 6-(5-(4,4-difluoropiperidine-1-carbonyl)pyrimidin-2-yl)-8-(4-fluorophenyl)-3,4-dih-ydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A32). White solid (81% yield).1H NMR (400 MHz, CDCl3) δ 8.87 (s, 2H), 8.58–8.54 (m, 2H), 7.91–7.83 (m, 2H), 7.23–7.15 (m, 2H), 4.63 (s, 2H), 4.00–3.55 (m, 6H),2.81 (s, 2H), 2.16–1.95 (m, 4H), 1.50 (s, 9H).
Tert-butyl 6-(2-(4,4-difluoropiperidine-1-carbonyl)pyrimidin-5-yl)-8-(4-fluorophenyl)-3,4-dih-ydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A33). White solid (83% yield).1H NMR (400 MHz, CDCl3) δ 9.08 (s, 2H), 7.86–7.79 (m, 2H), 7.61 (s, 1H), 7.52 (d, J = 1.8 Hz, 1H), 7.25–7.19 (m, 2H), 4.66 (s, 2H), 3.97 (t, J = 6.0 Hz, 2H), 3.81 (s, 2H), 3.56 (t, J = 5.9 Hz, 2H),2.82 (s, 2H), 2.21–2.05 (m, 4H), 1.51 (s, 9H).
Tert-butyl 6-(5-(4,4-difluoropiperidine-1-carbonyl)pyrazin-2-yl)-8-(4-fluorophenyl)-3,4-dihyd-robenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A34). White solid (78% yield).1H NMR (400 MHz, CDCl3) δ 9.06–9.03 (m, 2H), 8.12 (d, J = 1.7 Hz, 1H), 8.07 (s, 1H), 7.89–7.83 (m, 2H), 7.25–7.18 (m, 2H), 4.65 (s, 2H), 3.95 (t, J = 5.8 Hz, 2H), 3.87–3.76 (m, 4H), 2.82 (s, 2H),2.21–2.07 (m, 4H), 1.51 (s, 9H).
Tert-butyl 6-(6-(4,4-difluoropiperidine-1-carbonyl)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihy-drobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A35). White solid (80% yield).1H NMR (400 MHz, CDCl3) δ 8.22 (s, 1H), 8.16–8.07 (m, 2H), 8.00 (d, J = 8.8 Hz, 1H), 7.89–7.84 (m, 2H), 7.25–7.18 (m, 2H), 4.65 (s, 2H), 4.02–3.93 (m, 4H), 3.81 (s, 2H), 2.81 (s, 2H), 2.29–2.10 (m, 4H), 1.51 (s, 9H).
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(4-(4,4-difluoropiperidine-1-carbonyl)-2-fluorophenyl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (12).This compound was synthesized by following the general procedure E (white solid, 33% yield over two steps).1H NMR (600 MHz, CDCl3) δ 8.23 (s, 1H), 7.83 (s, 2H), 7.71–7.62 (m, 2H), 7.58 (t, J = 7.7 Hz, 2H), 7.53 (s, 1H), 7.31–7.27 (m, 2H), 7.21 (t, J = 8.6 Hz, 2H), 6.79 (dd, J = 47.4, 15.5 Hz, 1H), 6.53 (d, J = 8.6 Hz, 1H), 4.97–4.79 (m, 4H), 4.14–3.52 (m, 6H), 2.90 (s, 2H), 2.09–1.90 (m, 4H). 13C NMR (151 MHz, CDCl3) δ 169.1, 166.6, 163.60, 161.2 (d, J = 231.3 Hz), 159.5 (d, J = 249.5 Hz),159.2, 151.9, 151.3, 149.9, 149.2, 140.8, 136.3, 136.0, 132.0, 131.6 (d, J = 2.9 Hz), 130.5 (2C), 128.9, 124.8, 123.1 (2C),121.6, 121.5 (t, J = 242.5 Hz), 118.7 (d, J = 49.5 Hz), 115.9, 115.8, 115.3 (d, J = 24.8 Hz), 113.8 (d, J = 23.4 Hz), 112.0, 108.9, 44.6, 43.9, 40.8 (d, J = 194.2 Hz), 39.3, 34.8, 33.9, 21.4 (d, J = 215.2 Hz). HR-MS (ESI) Calcd. for C37H31O3N4F4+ [M+H]+, 655.2327; Found, 655.2322; HPLC purity, 95.3%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(5-(4,4-difluoropiperidine-1-carbonyl)pyridin-2-yl)-8-(4-flu-orophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (13). This compound was synthesized by following the general procedure E (white solid, 38% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 8.76 (d, J = 2.0 Hz, 1H), 8.24 (s, 1H), 8.10 (d, J = 1.8 Hz, 1H),8.04 (s, 1H), 7.92–7.83 (m, 4H), 7.70–7.61 (m, 2H), 7.21 (t, J = 8.7 Hz, 2H), 6.89–6.69 (m, 1H), 6.51 (d, J = 8.6 Hz, 1H),4.91 (s, 2H), 4.75 (s, 2H), 4.15–3.93 (m, 2H), 3.93–3.50 (m, 4H), 2.91 (s, 2H), 2.06 (s, 4H). 13C NMR (176 MHz, CDCl3) δ 168.3, 166.6, 162.8 (d, J = 247.8 Hz), 159.3, 159.1, 152.3 (d, J = 263.8 Hz), 149.9 (d, J = 62.4 Hz), 149.7, 147.9, 141.0, 136.3, 136.0 (d, J = 20.8 Hz), 134.2 (d, J = 21.2 Hz), 132.0, 130.5 (2C), 129.2, 129.0, 125.0, 123.0 (d, J = 43.8 Hz), 121.6, 121.4 (t, J = 242.4 Hz), 120.4, 117.0 (d, J = 54.6 Hz), 115.9, 115.8, 114.0 (d, J = 40.2 Hz), 113.0 (d, J = 212.4 Hz), 108.7, 44.8, 43.9 (d, J = 45.4 Hz), 40.8 (d, J = 224.3 Hz), 39.5, 34.9, 33.8, 21.5 (d, J = 253.0 Hz). HR-MS (ESI) Calcd. for C36H31O3N5F3+ [M+H]+, 638.2374; Found, 638.2382; HPLC purity, 99.9%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(6-(4,4-difluoropiperidine-1-carbonyl)pyridin-3-yl)-8-(4-flu-orophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (14). This compound was synthesized by following the general procedure E (white solid, 37% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 8.88 (d, J = 1.8 Hz, 1H), 8.24 (s, 1H), 8.08 (dd, J = 8.1, 2.3 Hz, 1H), 7.88–7.78 (m, 3H), 7.71–7.60 (m, 3H), 7.57 (d, J = 1.8 Hz, 1H), 7.25–7.19 (m, 2H), 6.88–6.70 (m, 1H), 6.53 (d, J = 8.6 Hz, 1H), 4.99–4.73 (m, 4H), 4.15–3.97 (m, 2H), 3.94 (t, J = 5.9 Hz, 2H), 3.81 (t, J = 5.9 Hz, 2H), 2.91 (s, 2H), 2.22–2.03 (m, 4H). 13C NMR (176 MHz, CDCl3) δ 167.6, 166.7, 162.9 (d, J = 248.1 Hz), 159.2, 152.1 (d, J = 49.4 Hz), 151.8, 150.3, 149.4, 147.0, 141.0, 138.3, 136.3, 135.8, 132.9, 131.8, 130.5 (2C),129.5, 125.4, 124.4, 123.1 (d, J = 34.4 Hz), 121.9 (t, J = 241.9 Hz), 121.6, 116.8 (d, J = 68.5 Hz), 116.0, 115.9, 113.8 (d, J = 63.3 Hz), 112.1, 108.8, 44.3, 44.0 (d, J = 53.7 Hz), 40.83 (d, J = 228.0 Hz), 39.8, 34.9 (t, J = 23.0 Hz), 34.1 (t, J = 23.3 Hz), 21.4 (d, J = 255.6 Hz). HR-MS (ESI) Calcd. for C36H31O3N5F3+ [M + H]+, 638.2379; Found, 638.2375; HPLC purity, 95.8%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(5-(4,4-difluoropiperidine-1-carbonyl)pyrimidin-2-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (15). This compound was synthesized by following the general procedure E (white solid, 23% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 8.89 (s, 2H), 8.58 (d, J = 10.2 Hz, 2H), 8.24 (s, 1H), 7.96–7.85 (m, 2H), 7.74–7.59 (m, 2H), 7.24–7.16 (m, 2H), 6.88–6.69 (m, 1H), 6.52 (d, J = 8.6 Hz, 1H), 5.04–4.54 (m, 4H), 4.19–3.56 (m, 6H), 2.93 (s, 2H), 2.28–1.92 (m, 4H). 13C NMR (176 MHz, CDCl3) δ 166.7, 165.9 (d, J = 54.9 Hz), 162.8 (d, J = 247.7 Hz),159.3, 156.1 (2C), 154.3, 151.6, 150.2, 149.6, 141.0, 136.1, 132.3, 132.0, 130.6, 130.5, 129.2, 126.2, 124.9, 124.5, 121.6, 121.2 (t, J = 242.3 Hz), 118.9 (d, J = 74.2 Hz), 115.9, 115.7, 113.8 (d, J = 64.8 Hz), 112.6, 108.7, 44.9, 43.9 (d, J = 42.0 Hz), 40.8 (d, J = 219.8 Hz), 39.6, 34.8, 33.9, 21.5 (d, J = 253.7 Hz). HR-MS(ESI) Calcd. for C35H30O3N6F3+ [M + H]+, 639.2331; Found, 639.2332; HPLC purity, 98.0%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(2-(4,4-difluoropiperidine-1-carbonyl)pyrimidin-5-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (16). This compound was synthesized by following the general procedure E (white solid, 28% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 9.08 (s, 2H), 8.23 (s, 1H), 7.87–7.80 (m, 2H), 7.71–7.58 (m, 3H), 7.54 (d, J = 1.8 Hz, 1H), 7.26–7.20 (m, 2H), 6.87–6.69 (m, 1H), 6.52 (d, J = 8.7 Hz, 1H), 4.99–4.86 (m, 2H), 4.82 (s, 2H),4.15–3.93 (m, 4H), 3.56 (t, J = 5.9 Hz, 2H), 2.92 (s, 2H),2.23–2.03 (m, 4H). 13C NMR (176 MHz, CDCl3) δ 166.7, 165.3, 163.0 (d, J = 248.6 Hz), 159.7 (d, J = 123.3 Hz), 155.6 (2C),152.6, 152.2, 150.7, 149.5, 141.1, 136.2, 134.8, 131.5, 130.5 (2C),129.8, 129.4, 125.9, 122.7, 121.7 (t, J = 242.7 Hz), 121.5, 116.8 (d, J = 70.2 Hz), 116.1, 116.0, 113.6 (d, J = 67.3 Hz), 112.2, 108.8, 44.0 (t, J = 5.1 Hz), 43.8, 40.8 (d, J = 223.6 Hz), 39.2 (t, J = 5.3 Hz), 34.7 (t, J = 23.6 Hz), 33.9 (t, J = 23.1 Hz), 21.4 (d, J = 252.2 Hz). HR-MS (ESI) Calcd. for C35H30O3N6F3+ [M + H]+, 639.2331; Found, 639.2325; HPLC purity, 97.0%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(5-(4,4-difluoropiperidine-1-carbonyl)pyrazin-2-yl)-8-(4-flu-orophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (17). This compound was synthesized by following the general procedure E (white solid, 32% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 9.10–9.02 (m, 2H), 8.24 (s, 1H), 8.16–8.05 (m, 2H), 7.91–7.82 (m, 2H), 7.73–7.61 (m, 2H), 7.25–7.19 (m, 2H), 6.88–6.68 (m, 1H), 6.52 (d, J = 8.6 Hz, 1H), 5.01–4.67 (m, 4H), 4.15–3.92 (m, 4H), 3.84 (s, 2H), 2.93 (s, 2H), 2.22–2.03 (m, 4H). 13C NMR (176 MHz, CDCl3) δ 166.7, 165.5, 162.9 (d, J = 247.8 Hz),159.3, 153.6 (d, J = 23.9 Hz), 152.0, 150.5, 149.6, 146.3, 145.4, 141.1, 139.5, 136.2, 131.7, 131.4, 130.6, 130.5, 129.5, 125.5, 123.0 (d, J = 28.7 Hz), 121.7, 121.6 (d, J = 241.5 Hz), 117.2 (d, J = 50.5 Hz), 116.0, 115.9, 113.7 (d, J = 61.2 Hz), 112.4, 108.7, 44.3, 44.0 (d, J = 49.5 Hz), 40.8 (d, J = 225.8 Hz), 40.0, 34.9 (t, J = 23.2 Hz), 34.1 (t, J = 23.2 Hz), 21.5 (d, J = 251.2 Hz). HR-MS (ESI) Calcd. for C35H30O3N6F3+ [M + H]+, 639.2331; Found, 639.2336; HPLC purity, 97.9%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(6-(4,4-difluoropiperidine-1-carbonyl)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (18). This compound was synthesized by following the general procedure E (white solid, 46% yield over two steps). 1H NMR (700 MHz, CDCl3) δ 8.29–8.19 (m, 2H), 8.18–8.06 (m, 2H), 8.01 (d, J = 9.0 Hz, 1H), 7.90–7.84 (m, 2H), 7.72–7.60 (m, 2H), 7.25–7.20 (m, 2H),6.78 (dd, J = 59.7, 15.3 Hz, 1H), 6.52 (d, J = 8.5 Hz, 1H),5.02–4.85 (m, 2H), 4.81 (s, 2H), 4.14–3.93 (m, 6H), 2.92 (s, 2H),2.28–2.12 (m, 4H). 13C NMR (176 MHz, CDCl3) δ 166.7, 165.2, 162.9 (d, J = 248.3 Hz), 159.9, 159.3, 154.2 (d, J = 195.7 Hz),152.0, 150.5, 149.5, 141.0, 136.2, 131.7, 131.2 (d, J = 19.6 Hz), 130.6, 130.5, 129.5, 128.9, 125.5, 124.9, 123.1 (d, J = 52.4 Hz),121.7 (t, J = 242.0 Hz), 121.6, 117.4 (d, J = 40.9 Hz), 116.0, 115.8, 113.7 (d, J = 67.9 Hz), 112.5, 108.8, 44.7 (d, J = 5.4 Hz),43.9 (d, J = 46.3 Hz), 41.4, 40.2 (t, J = 5.2 Hz), 35.1 (t, J = 23.4 Hz), 34.1 (t, J = 23.7 Hz), 21.4 (d, J = 253.8 Hz). HR-MS (ESI) Calcd. for C35H30O3N6F3+ [M + H]+, 639.2331; Found, 639.2330; HPLC purity, 95.8%.
Tert-butyl 8-(4-fluorophenyl)-6-(6-(morpholine-4-carbonyl)pyridazin-3-yl)-3,4-dihydrobenzof-uro[2,3-c]pyridine-2(1H)-carboxylate (A36). This compound was synthesized by following the general procedure F (white solid, 75% yield).1H NMR (400 MHz, CDCl3) δ 8.23 (s, 1H), 8.18–8.09 (m, 2H), 8.03 (d, J = 8.8 Hz, 1H), 7.90–7.84 (m, 2H), 7.25–7.18 (m, 2H), 4.66 (s, 2H), 4.02–3.94 (m, 2H), 3.93–3.85 (m, 4H), 3.84–3.78 (m, 4H),2.82 (s, 2H), 1.51 (s, 9H).
Tert-butyl 8-(4-fluorophenyl)-6-(6-(4-methylpiperazine-1-carbonyl)pyridazin-3-yl)-3,4-dihydr-obenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A37). This compound was synthesized by following the general procedure F (white solid, 35% yield). 1H NMR (400 MHz, CDCl3) δ 8.23 (s, 1H), 8.18–8.08 (m, 2H), 7.99 (d, J = 8.8 Hz, 1H), 7.90–7.83 (m, 2H), 7.25–7.18 (m, 2H), 4.66 (s, 2H), 3.97–3.88 (m, 4H), 3.81 (s, 2H), 2.82 (s, 2H), 2.59 (t, J = 5.2 Hz, 2H), 2.55 (t, J = 4.8 Hz, 2H), 2.36 (s, 3H), 1.51 (s, 9H).
Tert-butyl 8-(4-fluorophenyl)-6-(6-(4-oxopiperidine-1-carbonyl)pyridazin-3-yl)-3,4-dihydrobe-nzofuro[2,3-c]pyridine-2(1H)-carboxylate (A38). This compound was synthesized by following the general procedure F (white solid, 62% yield). 1H NMR (400 MHz, CDCl3) δ 8.21 (s, 1H), 8.16–8.02 (m, 3H), 7.89–7.83 (m, 2H), 7.24–7.16 (m, 2H), 4.64 (s, 2H), 4.21–4.10 (m, 4H), 3.79 (s, 2H), 2.80 (s, 2H), 2.71 (t, J = 6.2 Hz, 2H), 2.66 (t, J = 6.4 Hz, 2H), 1.50 (s, 9H).
Tert-butyl 6-(6-(4-cyano-4-methylpiperidine-1-carbonyl)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A39). This compound was synthesized by following the general procedure F (white solid, 62% yield). 1H NMR (700 MHz, CDCl3) δ 8.20 (s, 1H), 8.15–8.06 (m, 2H), 7.96 (d, J = 8.8 Hz, 1H), 7.87–7.84 (m, 2H), 7.22–7.17 (m, 2H),4.84–4.79 (m, 1H), 4.64 (s, 2H), 4.47–4.41 (m, 1H), 3.79 (s, 2H),3.49–3.44 (m, 1H), 3.21–3.16 (m, 1H), 2.80 (s, 2H), 2.12–2.07 (m, 1H), 2.01 (s, 3H), 2.01–1.98 (m, 1H), 1.91–1.86 (m, 1H),1.70–1.65 (m, 1H), 1.49 (s, 9H).
Tert-butyl 6-(6-(3-(difluoromethyl)azetidine-1-carbonyl)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A40). This compound was synthesized by following the general procedure F (white solid, 78.5% yield).1H NMR (400 MHz, CDCl3) δ 8.31 (d, J = 8.8 Hz, 1H), 8.23 (d, J = 1.8 Hz, 1H), 8.16–8.07 (m, 2H), 7.90–7.84 (m, 2H), 7.25–7.18 (m, 2H), 6.07 (td, J = 56.0, 4.2 Hz, 1H), 5.03 (dd, J = 11.2, 8.6 Hz, 1H), 4.93 (dd, J = 11.2, 5.7 Hz, 1H), 4.66 (s, 2H), 4.46–4.36 (m, 1H), 4.30 (dd, J = 11.0, 5.5 Hz, 1H), 3.81 (s, 2H), 3.29–3.13 (m, 1H), 2.81 (s, 2H), 1.52 (s, 9H).
Tert-butyl 6-(6-((1R,5S)-6,6-difluoro-1,5-dimethyl-3-azabicyclo[3.1.0]hexane-3-carbonyl)pyri-dazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A41). This compound was synthesized by following the general procedure F (white solid, 60% yield). 1H NMR (400 MHz, CDCl3) δ 8.22 (s, 1H), 8.18 (d, J = 8.9 Hz, 1H), 8.13 (s, 1H), 8.09 (d, J = 8.9 Hz, 1H), 7.89–7.83 (m, 2H), 7.24–7.17 (m, 2H), 4.65 (s, 2H), 4.58–4.50 (m, 1H), 4.43 (d, J = 12.5 Hz, 1H), 4.34 (d, J = 13.2 Hz, 1H), 4.05–3.95 (m, 1H), 3.80 (s, 2H), 2.81 (s, 2H),2.49–2.33 (m, 2H), 1.50 (s, 9H).
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-(4-fluoroph-enyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A42). This compound was synthesized by following the general procedure F (white solid, 79% yield). 1H NMR (400 MHz, CDCl3) δ 8.45 (d, J = 9.5 Hz, 1H), 8.35 (d, J = 8.8 Hz, 1H), 8.25–8.11 (m, 3H), 7.90–7.84 (m, 2H), 7.24–7.17 (m, 2H), 4.65 (s, 2H), 4.57–4.40 (m, 1H), 3.80 (s, 2H), 3.23–3.13 (m, 1H), 2.94 (d, J = 11.8 Hz, 1H), 2.81 (s, 2H),2.49–2.35 (m, 4H), 2.26 (t, J = 12.0 Hz, 1H), 2.15–2.06 (m, 1H),1.94 (qd, J = 12.3, 3.9 Hz, 1H), 1.51 (s, 9H).
Tert-butyl 8-(4-fluorophenyl)-6-(6-((2-methoxyethyl)carbamoyl)pyridazin-3-yl)-3,4-dihydrobe-nzofuro[2,3-c]pyridine-2(1H)-carboxylate (A43). This compound was synthesized by following the general procedure F (white solid, 81% yield). 1H NMR (400 MHz, CDCl3) δ 8.49 (t, J = 5.8 Hz, 1H), 8.33 (d, J = 8.8 Hz, 1H), 8.19 (s, 1H), 8.15 (s, 1H), 8.11 (d, J = 8.8 Hz, 1H), 7.89–7.82 (m, 2H), 7.23–7.16 (m, 2H), 4.64 (s, 2H), 3.79 (s, 2H), 3.74 (q, J = 5.4 Hz, 2H), 3.60 (t, J = 5.2 Hz, 2H), 3.39 (s, 3H), 2.80 (t, J = 5.5 Hz, 2H), 1.50 (s, 9H).
Tert-butyl 8-(4-fluorophenyl)-6-(6-((2-(2-methoxyethoxy)ethyl)carbamoyl)pyridazin-3-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A44). This compound was synthesized by following the general procedure F (white solid, 73% yield). 1H NMR (400 MHz, CDCl3) δ 8.50 (t, J = 5.6 Hz, 1H), 8.30 (d, J = 8.8 Hz, 1H), 8.14 (d, J = 1.8 Hz, 1H), 8.13–8.06 (m, 2H), 7.82 (dd, J = 8.5, 5.5 Hz, 2H), 7.20–7.11 (m, 2H), 4.60 (s, 2H),3.68–3.58 (m, 6H), 3.52–3.48 (m, 2H), 3.34 (s, 3H), 2.76 (s, 2H),2.39 (s, 2H), 1.45 (s, 9H).
Tert-butyl 6-(6-(3,3-difluorocyclobutane-1-carboxamido)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A45). This compound was synthesized by following the general procedure F (white solid, 77% yield). 1H NMR (400 MHz, CDCl3) δ 11.79 (s, 1H), 8.77 (d, J = 9.4 Hz, 1H), 8.13 (s, 1H), 8.07 (d, J = 9.4 Hz, 1H), 7.97–7.79 (m, 3H), 7.25–7.18 (m, 2H), 4.66 (s, 2H), 4.05–3.93 (m, 1H), 3.82 (s, 2H),3.12–2.96 (m, 2H), 2.96–2.78 (m, 4H), 1.52 (s, 9H).
Tert-butyl (S)-8-(4-fluorophenyl)-6-(6-(tetrahydrofuran-2-carboxamido)pyridazin-3-yl)-3,4-di-hydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A46). This compound was synthesized by following the general procedure F (white solid, 87% yield).1H NMR (400 MHz, CDCl3) δ 9.57 (s, 1H), 8.53 (d, J = 9.3 Hz, 1H),8.07–7.95 (m, 2H), 7.91 (d, J = 9.3 Hz, 1H), 7.86–7.79 (m, 2H), 7.20–7.12 (m, 2H), 4.61 (s, 2H), 4.52 (dd, J = 8.5, 5.8 Hz, 1H), 4.11 (q, J = 7.0 Hz, 1H), 3.97 (q, J = 7.3 Hz, 1H), 3.76 (s, 2H), 2.77 (s, 2H), 2.44–2.31 (m, 1H), 2.24–2.12 (m, 1H), 2.05–1.87 (m, 2H),1.49 (s, 9H).
(E)-3-(6-Aminopyridin-3-yl)-1-(8-(4-fluorophenyl)-6-(6-(morpholine-4-carbonyl)pyridazin-3-yl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (19). This compound was synthesized by following the general procedure E (white solid, 37% yield). 1H NMR (400 MHz, DMSO-d6) δ 8.60 (d, J = 8.9 Hz, 1H),8.46 (s, 1H), 8.30 (s, 1H), 8.19 (s, 1H), 8.07–7.99 (m, 3H), 7.93 (d, J = 8.8 Hz, 1H), 7.50–7.37 (m, 3H), 7.14 (dd, J = 24.5, 14.9 Hz, 1H), 6.51–6.41 (m, 3H), 4.96 (d, J = 79.5 Hz, 2H), 4.03 (d, J = 41.3 Hz, 2H), 3.74 (brs, 4H), 3.66–3.60 (m, 2H), 3.59–3.53 (m, 2H), 2.87 (d, J = 27.0 Hz, 2H). 13C NMR (176 MHz, DMSO-d6) δ 165.9 (d, J = 35.5 Hz), 164.9, 162.1 (d, J = 245.7 Hz), 160.6, 158.6, 155.1, 152.4 (d, J = 18.5 Hz), 151.8 (d, J = 16.3 Hz), 150.2, 140.5 (d, J = 16.1 Hz), 135.5, 131.6, 131.2, 130.6 (2C), 129.2, 127.8, 125.4, 124.0, 122.4, 119.4, 117.5, 115.8, 115.7, 113.0 (d, J = 24.9 Hz), 112.6 (d, J = 31.4 Hz), 108.0, 66.3, 66.0, 47.4, 42.9 (d, J = 74.7 Hz), 42.3, 40.2 (d, J = 81.7 Hz), 20.9 (d, J = 248.8 Hz). HR-MS (ESI) Calcd. for C34H30O4N6F+ [M + H]+,605.2313; Found, 605.2312; HPLC purity, 99.3%.
(E)-3-(6-Aminopyridin-3-yl)-1-(8-(4-fluorophenyl)-6-(6-(4-methylpiperazine-1-carbonyl)pyrid-azin-3-yl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (20).This compound was synthesized by following the general procedure E (white solid, 35% yield). 1H NMR (400 MHz, CD3OD) δ 8.30–8.23 (m, 1H), 8.14–8.04 (m, 3H), 7.93–7.84 (m, 4H), 7.50 (d, J = 15.3 Hz, 1H), 7.25–7.16 (m, 2H), 7.07–6.95 (m, 1H),6.64–6.56 (m, 1H), 4.83 (d, J = 49.0 Hz, 2H), 3.99 (s, 2H), 3.89 (s, 2H), 3.73 (t, J = 5.1 Hz, 2H), 2.84–2.72 (m, 2H), 2.69 (t, J = 5.0 Hz, 2H), 2.63 (t, J = 4.9 Hz, 2H), 2.42 (s, 3H). 13C NMR (176 MHz, CD3OD) δ 169.0, 167.1, 164.1 (d, J = 246.7 Hz), 161.8, 161.3, 156.2, 154.5, 152.7, 150.1 (d, J = 16.2 Hz), 142.2, 137.3, 133.1, 132.4, 131.7 (2C), 130.7, 129.4, 127.1, 126.1, 123.8, 121.7, 118.5, 116.6, 116.5, 114.6 (d, J = 34.8 Hz), 114.1 (d, J = 21.1 Hz),110.5, 55.9, 55.3, 48.0, 45.8, 44.7, 43.0, 41.6 (d, J = 155.5 Hz), 22.0 (d, J = 227.8 Hz). HR-MS (ESI) Calcd. for C35H33O3N7F+ [M + H]+, 618.2629; Found, 618.2627; HPLC purity, 95.6%.
(E)-1-(6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofur-o[2,3-c]pyridin-6-yl)pyridazine-3-carbonyl)piperidin-4-one (21). This compound was synthesized by following the general procedure E (white solid, 26% yield). 1H NMR (400 MHz, CDCl3) δ 8.30–8.21 (m, 2H),8.17–8.05 (m, 3H), 7.92–7.84 (m, 2H), 7.74–7.61 (m, 2H), 7.26–7.19 (m, 2H), 6.88–6.70 (m, 1H), 6.52 (d, J = 8.6 Hz, 1H),4.99–4.86 (m, 2H), 4.70 (s, 2H), 4.22–4.13 (m, 4H), 4.12–3.93 (m, 2H), 2.93 (s, 2H), 2.74 (t, J = 6.2 Hz, 2H), 2.69 (t, J = 6.4 Hz, 2H). 13C NMR (176 MHz, CDCl3) δ 206.9, 166.7, 165.4, 162.9 (d, J = 248.3 Hz), 160.1, 159.3, 154.7, 153.6, 149.8, 141.1, 136.1, 131.7, 131.1, 130.6 (2C), 129.6, 129.0, 125.5, 125.0, 123.0, 121.7, 117.3, 116.0, 115.9, 113.7 (d, J = 67.8 Hz), 112.5, 108.7, 46.6, 44.0 (d, J = 68.3 Hz), 42.6, 42.0, 41.4, 41.1, 21.4 (d, J = 268.0 Hz). HR-MS (ESI) Calcd. for C35H30O4N6F+ [M + H]+, 617.2313; Found, 617.2308; HPLC purity, 99.4%.
(E)-1-(6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofur-o[2,3-c]pyridin-6-yl)pyridazine-3-carbonyl)-4-methylpiperidine-4-carbonitrile (22).This compound was synthesized by following the general procedure E (white solid, 38% yield). 1H NMR (400 MHz, CDCl3) δ 8.22 (d, J = 6.7 Hz, 2H), 8.17–8.06 (m, 2H), 7.98 (d, J = 8.8 Hz, 1H), 7.90–7.83 (m, 2H), 7.70–7.60 (m, 2H), 7.25–7.17 (m, 2H), 6.87–6.67 (m, 1H), 6.51 (d, J = 8.6 Hz, 1H),4.87 (q, J = 15.5, 14.4 Hz, 5H), 4.45 (d, J = 14.0 Hz, 1H), 4.03 (d, J = 33.8 Hz, 2H), 3.53–3.41 (m, 1H), 3.20 (td, J = 13.2, 2.7 Hz, 1H), 2.91 (s, 2H), 2.14–2.08 (m, 1H), 2.05–1.98 (m, 1H),1.90 (td, J = 12.9, 4.0 Hz, 1H), 1.69 (td, J = 13.3, 4.3 Hz, 1H),1.48 (s, 3H). 13C NMR (176 MHz, CDCl3) δ 166.7, 165.1, 162.9 (d, J = 248.2 Hz), 159.8, 159.3, 154.9, 153.6, 149.4, 141.0, 136.1, 131.7, 130.6, 130.5, 129.5, 128.8, 125.4, 124.9, 123.2, 122.9, 121.5, 117.3 (d, J = 15.4 Hz), 115.9, 115.8, 113.6 (d, J = 13.3 Hz), 112.4, 108.8, 45.3, 44.0 (d, J = 59.9 Hz), 41.4, 40.6, 37.2, 36.4, 33.8, 26.7, 21.4 (d, J = 260.7 Hz). HR-MS (ESI) Calcd. for C37H33O3N7F+ [M + H]+, 642.2629; Found, 642.2626; HPLC purity, 95.8%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(6-(3-(difluoromethyl)azetidine-1-carbonyl)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (23).This compound was synthesized by following the general procedure E (white solid, 26% yield). 1H NMR (400 MHz, CDCl3) δ 8.31 (d, J = 8.9 Hz, 1H), 8.24 (d, J = 14.8 Hz, 2H), 8.17–8.05 (m, 2H), 7.90–7.83 (m, 2H), 7.72–7.58 (m, 2H), 7.25–7.18 (m, 2H), 6.88–6.67 (m, 1H), 6.52 (d, J = 8.6 Hz, 1H), 6.06 (td, J = 56.1, 4.1 Hz, 1H), 5.07–4.99 (m, 1H), 4.98–4.80 (m, 5H),4.46–4.35 (m, 1H), 4.30 (dd, J = 11.0, 5.4 Hz, 1H), 4.04 (d, J = 34.8 Hz, 2H), 3.27–3.11 (m, 1H), 2.91 (s, 2H). 13C NMR (176 MHz, CDCl3) δ 166.7, 163.0, 162.9 (d, J = 248.1 Hz),160.0, 159.3, 153.4 (d, J = 77.9 Hz), 152.0, 150.5, 149.5, 141.0, 136.2, 131.7, 131.2, 130.6, 130.5, 129.5, 127.7, 125.5, 124.7, 123.2 (d, J = 42.3 Hz), 121.6, 117.5 (d, J = 47.2 Hz), 116.0, 115.9 (t, J = 240.9 Hz), 115.8, 113.8 (d, J = 68.3 Hz), 112.5, 108.8, 54.4 (d, J = 6.2 Hz), 48.4 (t, J = 6.2 Hz), 43.9 (d, J = 49.3 Hz), 40.8 (d, J = 221.1 Hz), 33.2 (t, J = 23.2 Hz), 21.4 (d, J = 251.8 Hz). HR-MS (ESI) Calcd. for C34H28O3N6F3+ [M + H]+, 625.2175; Found, 625.2166; HPLC purity, 97.5%.
(E)-3-(6-Aminopyridin-3-yl)-1-(6-(6-((1R,5S)-6,6-difluoro-3-azabicyclo[3.1.0]hexane-3-carbonyl)pyridazin-3-yl)-8-(4-fluorophenyl)-3,4-dihydrobenzofuro[2,3-c]pyridin-2(1H)-yl)prop-2-en-1-one (24). This compound was synthesized by following the general procedure E (white solid, 57% yield). 1H NMR (400 MHz, CDCl3) δ 8.27–8.21 (m, 2H), 8.18 (d, J = 8.9 Hz, 1H),8.16–8.10 (m, 1H), 8.08 (d, J = 8.9 Hz, 1H), 7.90–7.83 (m, 2H), 7.70–7.60 (m, 2H), 7.25–7.17 (m, 2H), 6.87–6.67 (m, 1H), 6.51 (d, J = 8.6 Hz, 1H), 4.96–4.85 (m, 2H), 4.80 (s, 2H), 4.58–4.51 (m, 1H), 4.43 (d, J = 12.5 Hz, 1H), 4.35 (d, J = 13.2 Hz, 1H),4.14–3.94 (m, 3H), 2.90 (s, 2H), 2.48–2.34 (m, 2H). 13C NMR (176 MHz, CDCl3) δ 166.6, 163.4, 162.8 (d. J = 248.0 Hz),159.7, 159.3, 154.5, 153.5, 151.2 (d, J = 255.2 Hz), 149.7, 141.0, 136.0, 131.7, 131.2 (d, J = 25.2 Hz), 130.6, 130.5, 129.5, 128.7, 125.4, 124.6, 123.1 (d, J = 44.6 Hz), 121.5, 117.4 (d, J = 48.8 Hz), 115.9, 115.8, 114.0 (d, J = 61.6 Hz), 113.0 (dd, J = 294.7, 278.7 Hz), 112.9 (d, J = 174.2 Hz), 108.7, 48.7, 47.4, 43.9 (d, J = 45.8 Hz), 40.8 (d, J = 222.9 Hz), 27.2 (t, J = 11.7 Hz), 24.3 (t, J = 12.0 Hz), 21.4 (d, J = 253.0 Hz). HR-MS (ESI) Calcd. for C35H28O3N6F3+ [M + H]+, 637.2175; Found, 637.2175; HPLC purity, 95.8%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofur-o[2,3-c]pyridin-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (25). This compound was synthesized by following the general procedure E (white solid, 47% yield). 1H NMR (700 MHz, DMSO-d6) δ 8.98 (d, J = 9.3 Hz, 1H), 8.63 (d, J = 8.9 Hz, 1H), 8.43 (s, 1H), 8.33 (d, J = 1.8 Hz, 1H), 8.28 (d, J = 8.8 Hz, 1H), 8.19 (d, J = 7.3 Hz, 1H), 8.02 (dd, J = 8.4, 5.4 Hz, 2H), 7.92 (d, J = 8.6 Hz, 1H), 7.48–7.43 (m, 1H), 7.42 (t, J = 8.7 Hz, 2H), 7.14 (dd, J = 41.1, 15.3 Hz, 1H), 6.53–6.41 (m, 3H), 4.95 (d, J = 138.6 Hz, 2H), 4.51–4.39 (m, 1H), 4.02 (d, J = 71.2 Hz, 2H), 3.16–3.07 (m, 1H), 2.89 (s, 1H), 2.82 (d, J = 10.9 Hz, 2H), 2.43 (dd, J = 28.8, 12.0 Hz, 1H), 2.27 (s, 3H), 2.25–2.19 (m, 1H), 2.07–1.99 (m, 1H), 1.87–1.81 (m, 1H). 13C NMR (176 MHz, DMSO-d6) δ 166.0 (d, J = 33.8 Hz), 162.8 (2C),160.7 (d, J = 246.1 Hz), 160.6, 152.5 (d, J = 18.4 Hz), 151.9 (d, J = 20.1 Hz), 150.9, 150.2, 140.5 (d, J = 16.2 Hz), 135.5, 131.6, 130.9, 130.6, 130.5, 129.2, 126.4, 125.7, 124.1, 122.5, 119.4, 119.3 (dd, J = 242.8, 4.8 Hz), 117.7, 115.8, 115.7, 113.0 (d, J = 20.2 Hz), 112.6 (d, J = 28.3 Hz), 108.0, 58.9 (dd, J = 28.0, 23.0 Hz), 52.7, 49.4 (t, J = 20.3 Hz), 44.7, 42.9 (d, J = 70.2 Hz),40.3 (d, J = 84.1 Hz), 28.1 (d, J = 6.6 Hz), 20.9 (d, J = 248.6 Hz). HR-MS (ESI) Calcd. for C36H33O3N7F3+ [M + H]+, 668.2597; Found, 668.2599; HPLC purity, 97.8%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofur-o[2,3-c]pyridin-6-yl)-N-(2-methoxyethyl)pyridazine-3-carboxamide (26). This compound was synthesized by following the general procedure E (white solid, 30% yield).1H NMR (400 MHz, CDCl3) δ 8.49 (t, J = 5.5 Hz, 1H), 8.36 (d, J = 8.4 Hz, 1H), 8.23 (s, 2H), 8.20–8.09 (m, 2H), 7.91–7.84 (m, 2H), 7.72–7.59 (m, 2H), 7.21 (t, J = 8.2 Hz, 2H), 6.87–6.71 (m, 1H), 6.52 (d, J = 7.5 Hz, 1H), 5.00–4.78 (m, 4H), 4.13–3.95 (m, 2H), 3.79–3.71 (m, 2H), 3.61 (t, J = 5.4 Hz, 2H), 3.41 (s, 3H), 2.91 (s, 2H). 13C NMR (176 MHz, CDCl3) δ 166.6, 162.9 (d, J = 248.2 Hz), 162.8, 160.7, 159.3, 153.5, 151.9, 150.7 (d, J = 87.4 Hz), 149.5, 141.0, 136.1, 131.7, 131.2 (d, J = 24.3 Hz), 130.5 (2C), 129.5, 126.4, 125.4, 124.9, 123.1 (d, J = 48.9 Hz),121.5, 117.4 (d, J = 51.7 Hz), 115.9, 115.8, 114.1 (d, J = 54.4 Hz),113.0 (d, J = 185.8 Hz), 108.8, 71.1, 59.0, 43.9 (d, J = 49.9 Hz),40.8 (d, J = 223.9 Hz), 39.6, 21.4 (d, J = 253.1 Hz). HR-MS (ESI) Calcd. for C33H30O4N6F+ [M + H]+, 593.2313; Found, 593.2303; HPLC purity, 99.6%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofur-o[2,3-c]pyridin-6-yl)-N-(2-(2-methoxyethoxy)ethyl)pyridazine-3-carboxamide (27). This compound was synthesized by following the general procedure E (white solid, 18% yield). 1H NMR (400 MHz, DMSO-d6) δ 9.15 (t, J = 5.8 Hz, 1H), 8.64 (d, J = 8.9 Hz, 1H), 8.45 (d, J = 1.8 Hz, 1H), 8.33 (d, J = 1.8 Hz, 1H), 8.27 (d, J = 8.9 Hz, 1H), 8.19 (s, 1H), 8.07–7.99 (m, 2H), 7.92 (d, J = 8.8 Hz, 1H), 7.49–7.37 (m, 3H), 7.22–7.05 (m, 1H), 6.53–6.40 (m, 3H), 4.96 (d, J = 79.8 Hz, 2H), 4.03 (d, J = 39.9 Hz, 2H), 3.65–3.51 (m, 6H), 3.49–3.43 (m, 2H), 3.25 (s, 3H), 2.87 (d, J = 26.9 Hz, 2H). 13C NMR (176 MHz, DMSO-d6) δ 165.3 (d, J = 35.0 Hz), 162.0, 160.1, 161.5 (d, J = 246.9 Hz), 159.3, 151.8, 151.3150.7, 149.6, 139.9 (d, J = 15.5 Hz), 134.8, 131.0, 130.5, 130.0 (2C), 128.6, 125.5, 125.1, 123.5, 121.9, 118.8, 117.1, 115.2, 115.1, 112.4 (d, J = 26.0 Hz), 112.0 (d, J = 33.2 Hz), 107.4, 70.7, 68.8, 68.1, 57.5, 42.3 (d, J = 72.3 Hz), 39.7 (d, J = 82.5 Hz), 38.3, 20.3 (d, J = 248.0 Hz). HR-MS (ESI) Calcd. for C35H34O5N6F+ [M + H]+, 637.2575; Found, 637.2568; HPLC purity, 95.5%.
(E)-N-(6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofur-o[2,3-c]pyridin-6-yl)pyridazin-3-yl)-3,3-difluorocyclobutane-1-carboxamide (28).This compound was synthesized by following the general procedure E (white solid, 22% yield). 1H NMR (400 MHz, DMSO-d6) δ 11.41 (s, 1H), 8.44 (s, 2H), 8.32 (d, J = 1.8 Hz, 1H),8.22–8.14 (m, 2H), 8.06–7.97 (m, 2H), 7.93 (d, J = 8.8 Hz, 1H), 7.50–7.32 (m, 3H), 7.22–7.05 (m, 1H), 6.54–6.38 (m, 3H), 4.94 (d, J = 80.4 Hz, 2H), 4.02 (d, J = 41.3 Hz, 2H),3.41–3.34 (m, 1H), 2.97–2.74 (m, 6H). 13C NMR (176 MHz, DMSO-d6) δ 172.4, 165.9 (d, J = 38.0 Hz), 162.0 (d, J = 245.7 Hz), 160.6, 155.5, 154.4, 151.9 (d, J = 18.5 Hz),151.6 (d, J = 15.6 Hz), 150.2, 140.4 (d, J = 17.5 Hz), 135.5, 131.8, 131.6, 130.6 (2C), 129.0, 126.3, 123.8, 121.7, 119.5 (dd, J = 269.2, 14.3 Hz), 119.4, 118.8, 116.6, 115.8, 115.6, 113.0, 112.5 (d, J = 10.8 Hz), 108.0, 42.9 (d, J = 71.5 Hz), 40.3 (d, J = 85.5 Hz), 37.9, 37.9 (t, J = 23.6 Hz, 2C), 27.3 (dd, J = 14.5, 5.3 Hz), 20.9 (d, J = 245.6 Hz). HR-MS (ESI) Calcd. for C34H28O3N6F3+ [M + H]+, 625.2175; Found, 625.2173; HPLC purity, 97.0%.
(S,E)-N-(6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofu-ro[2,3-c]pyridin-6-yl)pyridazin-3-yl)tetrahydrofuran-2-carboxamide (29). This compound was synthesized by following the general procedure E (white solid, 19% yield). 1H NMR (400 MHz, DMSO-d6) δ 10.63 (s, 1H),8.42–8.31 (m, 2H), 8.25 (s, 1H), 8.18–8.09 (m, 2H), 8.00–7.86 (m, 3H), 7.47–7.32 (m, 3H), 7.17–7.03 (m, 1H), 6.49–6.38 (m, 3H),4.90 (d, J = 79.9 Hz, 2H), 4.55 (dd, J = 8.2, 5.5 Hz, 1H), 4.06–3.90 (m, 3H), 3.82 (q, J = 7.1 Hz, 1H), 2.81 (d, J = 28.0 Hz, 2H),2.28–2.14 (m, 1H), 2.06–1.77 (m, 3H). 13C NMR (176 MHz, DMSO-d6) δ 173.0, 165.9 (d, J = 35.8 Hz), 162.0 (d, J = 245.7 Hz), 160.6, 155.7, 153.7, 151.9 (d, J = 19.0 Hz), 151.5 (d, J = 18.2 Hz), 150.2, 140.5 (d, J = 14.7 Hz), 135.4, 131.8, 131.6, 130.6, 130.5, 129.0, 126.3, 123.8, 121.8, 119.4, 118.8, 116.6, 115.8, 115.6, 113.0, 112.5 (d, J = 8.6 Hz), 108.0, 77.5, 69.0, 42.9 (d, J = 71.8 Hz), 40.2 (d, J = 83.3 Hz), 29.9, 25.2, 20.9 (d, J = 245.8 Hz). HR-MS (ESI) Calcd. for C34H30O4N6F+ [M + H]+,605.2313; Found, 605.2306; HPLC purity, 95.2%.
Compound A58 was synthesized by following the preparation procedures of compound A42.
Methyl 5-bromo-3-chloro-2-hydroxybenzoate (A48). White solid (96% yield). 1H NMR (400 MHz, CDCl3) δ 11.26 (s, 1H), 7.87 (d, J = 2.5 Hz, 1H), 7.66 (d, J = 2.4 Hz, 1H), 7.24 (s, 1H), 3.96 (s, 3H).
Methyl 5-bromo-3-chloro-2-(2-ethoxy-2-oxoethoxy)benzoate (A49). White solid (98% yield). 1H NMR (400 MHz, CDCl3) δ 7.83 (d, J = 2.4 Hz, 1H), 7.69 (d, J = 2.4 Hz, 1H), 4.67 (s, 2H),4.30 (q, J = 7.2 Hz, 2H), 3.90 (s, 3H), 1.32 (t, J = 7.2 Hz, 3H).
5-Bromo-2-(carboxymethoxy)-3-chlorobenzoic acid (A50). White solid (96% yield). 1H NMR (400 MHz, CD3OD) δ 7.90 (d, J = 2.4 Hz, 1H), 7.85 (d, J = 2.4 Hz, 1H), 4.68 (s, 2H).
5-Bromo-7-chlorobenzofuran-3-yl acetate (A51). White solid (43% yield). 1H NMR (400 MHz, CDCl3) δ 8.09 (s, 1H), 7.61 (s, 1H), 7.47 (s, 1H), 2.37 (s, 3H).
5-Bromo-7-chlorobenzofuran-3(2H)-one (A52). Brown solid (98% yield). 1H NMR (400 MHz, CDCl3) δ 7.76 (d, J = 1.4 Hz, 1H), 7.71 (d, J = 1.4 Hz, 1H), 4.77 (s, 2H).
2-(5-Bromo-7-chlorobenzofuran-3-yl)acetonitrile (A53).Brown solid (62% yield). 1H NMR (400 MHz, CDCl3) δ 7.75 (s, 1H), 7.64 (d, J = 1.7 Hz, 1H), 7.53 (d, J = 1.7 Hz, 1H), 3.74 (d, J = 1.3 Hz, 2H).
2-(5-Bromo-7-chlorobenzofuran-3-yl)ethan-1-amine (A54).Yellow oil (51% yield). 1H NMR (400 MHz, DMSO-d6) δ 7.98 (s, 1H), 7.91 (d, J = 1.8 Hz, 1H), 7.64 (d, J = 1.8 Hz, 1H), 2.82 (t, J = 6.8 Hz, 2H), 2.70 (t, J = 6.8 Hz, 2H), 1.87 (brs, 2H).
Tert-butyl 6-bromo-8-chloro-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A56). White solid (40% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 7.47 (s, 1H), 7.39 (s, 1H),4.63 (s, 2H), 3.75 (s, 2H), 2.68 (s, 2H), 1.50 (s, 9H).
Tert-butyl 8-chloro-6-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A57). White solid (90% yield). 1H NMR (400 MHz, CDCl3) δ 7.79 (s, 1H), 7.69 (s, 1H), 4.62 (s, 2H), 3.74 (s, 2H), 2.70 (s, 2H),1.48 (s, 9H), 1.35 (s, 12H).
Tert-butyl 8-chloro-6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A58). White solid (52% yield).1H NMR (400 MHz, DMSO-d6) δ 9.03 (d, J = 9.3 Hz, 1H), 8.59 (d, J = 8.7 Hz, 1H), 8.44 (s, 1H), 8.33–8.27 (m, 2H), 4.66 (s, 2H),3.72 (s, 2H), 3.52–3.46 (m, 1H), 3.17–3.04 (m, 1H), 2.86–2.74 (m, 3H), 2.46–2.34 (m, 1H), 2.27 (s, 3H), 2.25–2.16 (m, 1H),2.10–2.00 (m, 1H), 1.86–1.78 (m, 1H), 1.45 (s, 9H).
General procedure G for synthesis of compounds A59A66. To a solution of A58 (0.10 mmol, 1 eq.) in 1,4-dioxane (0.9 mL) was added an appropriate boronic ester (0.15 mmol, 1.5 eq.), Pd2(dba)3 (0.02 mmol, 0.2 eq.), PCy3 (0.04 mmol, 0.4 eq.), and Cs2CO3 (0.25 mmol, 2.5 eq.). The mixture was heated to 140 ℃ for 4 h in the microwave, then cooled to room temperature and extracted with ethyl acetate. The organic layer was washed with brine, dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford compounds A59A66.
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-methyl-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A59). Yellow solid (35% yield). 1H NMR (400 MHz, CDCl3) δ 8.44 (d, J = 9.3 Hz, 1H), 8.32 (t, J = 8.9 Hz, 1H), 8.13–8.03 (m, 2H), 7.84 (s, 1H), 4.63 (s, 2H), 4.56–4.40 (m, 1H), 3.77 (s, 2H), 3.23–3.13 (m, 1H), 2.93 (d, J = 11.7 Hz, 1H), 2.76 (s, 2H), 2.58 (s, 3H), 2.49–2.36 (m, 4H), 2.26 (t, J = 12.6 Hz, 1H), 2.14–2.05 (m, 1H), 2.00–1.88 (m, 1H), 1.50 (s, 9H).
Tert-butyl 8-cyclopropyl-6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A60). Yellow solid (50% yield). 1H NMR (400 MHz, CDCl3) δ 8.43 (d, J = 9.5 Hz, 1H), 8.31 (d, J = 8.8 Hz, 1H), 8.06 (d, J = 8.9 Hz, 1H), 7.99 (s, 1H), 7.71–7.60 (m, 1H), 4.64 (s, 2H), 4.56–4.39 (m, 1H), 3.77 (s, 2H), 3.15 (t, J = 12.6 Hz, 1H),2.92 (d, J = 11.8 Hz, 1H), 2.76 (s, 2H), 2.46–2.30 (m, 5H), 2.24 (t, J = 11.8 Hz, 1H), 2.13–2.04 (m, 1H), 1.98–1.85 (m, 2H), 1.50 (s, 9H), 1.14–1.06 (m, 2H), 1.04–0.97 (m, 2H).
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-(3,3,5,5-tetr-amethylcyclohex-1-en-1-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A61). White solid (75% yield). 1H NMR (400 MHz, CDCl3) δ 8.43 (d, J = 9.5 Hz, 1H), 8.31 (d, J = 8.8 Hz, 1H), 8.10 (d, J = 8.9 Hz, 1H), 8.04 (s, 1H), 8.01–7.92 (m, 1H), 6.11 (s, 1H), 4.62 (s, 2H),4.53–4.37 (m, 1H), 3.76 (s, 2H), 3.20–3.09 (m, 1H), 2.90 (d, J = 11.8 Hz, 1H), 2.75 (t, J = 5.6 Hz, 2H), 2.44–2.31 (m, 6H),2.27–2.18 (m, 1H), 2.12–2.02 (m, 1H), 1.97–1.84 (m, 1H), 1.49 (s, 9H), 1.45 (s, 2H), 1.12 (s, 6H), 1.06 (s, 6H).
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-(4,4-dimeth-ylcyclohex-1-en-1-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A62). White solid (19% yield).1H NMR (400 MHz, CDCl3) δ 8.45 (d, J = 9.5 Hz, 1H), 8.33 (d, J = 8.9 Hz, 1H), 8.15–7.94 (m, 3H),6.48 (s, 1H), 4.64 (s, 2H), 4.56–4.38 (m, 1H), 3.78 (s, 2H),3.23–3.10 (m, 1H), 2.93 (d, J = 11.7 Hz, 1H), 2.77 (s, 2H), 2.63 (s, 2H), 2.47–2.35 (m, 4H), 2.26 (t, J = 11.4 Hz, 1H), 2.14–2.06 (m, 3H), 1.99–1.87 (m, 1H), 1.59 (t, J = 6.3 Hz, 2H), 1.50 (s, 9H), 1.02 (s, 6H).
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-(thiophen-3-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A63). Brown solid (77% yield). 1H NMR (400 MHz, CDCl3) δ 8.43 (d, J = 9.5 Hz, 1H),8.34–8.22 (m, 2H), 8.13–8.06 (m, 2H), 8.00 (dd, J = 3.0, 1.3 Hz, 1H), 7.72 (dd, J = 5.0, 1.3 Hz, 1H), 7.44 (dd, J = 5.0, 3.0 Hz, 1H), 4.65 (s, 2H), 4.54–4.37 (m, 1H), 3.78 (s, 2H),3.21–3.11 (m, 1H), 2.91 (d, J = 11.7 Hz, 1H), 2.76 (s, 2H),2.46–2.33 (m, 4H), 2.28–2.19 (m, 1H), 2.12–2.04 (m, 1H),1.98–1.87 (m, 1H), 1.50 (s, 9H). Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-(p-tolyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A64). White solid (65% yield). 1H NMR (400 MHz, CDCl3) δ 8.43 (d, J = 9.6 Hz, 1H), 8.30 (d, J = 8.8 Hz, 1H), 8.20–8.11 (m, 2H), 8.09 (d, J = 8.8 Hz, 1H), 7.75 (d, J = 7.9 Hz, 2H), 7.29 (d, J = 7.9 Hz, 2H), 4.61 (s, 2H),4.54–4.35 (m, 1H), 3.77 (s, 2H), 3.19–3.10 (m, 1H), 2.90 (d, J = 11.9 Hz, 1H), 2.76 (s, 2H), 2.46–2.31 (m, 7H), 2.28–2.16 (m, 1H), 2.11–2.01 (m, 1H), 1.98–1.84 (m, 1H), 1.48 (s, 9H).
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-(2-fluoro-4-methylphenyl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A65). White solid (82% yield).1H NMR (400 MHz, CDCl3) δ 8.44 (d, J = 9.5 Hz, 1H), 8.36–8.30 (m, 2H), 8.12 (d, J = 8.9 Hz, 1H),8.09–8.00 (m, 1H), 7.53 (t, J = 7.8 Hz, 1H), 7.12–7.03 (m, 2H),4.61 (s, 2H), 4.55–4.39 (m, 1H), 3.79 (s, 2H), 3.22–3.13 (m, 1H),2.92 (d, J = 12.0 Hz, 1H), 2.81 (s, 2H), 2.48–2.33 (m, 7H),2.30–2.21 (m, 1H), 2.14–2.05 (m, 1H), 2.00–1.87 (m, 1H), 1.49 (s, 9H).
Tert-butyl 6-(6-((3,3-difluoro-1-methylpiperidin-4-yl)carbamoyl)pyridazin-3-yl)-8-mesityl-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A66). White solid (44% yield). 1H NMR (400 MHz, CDCl3) δ 8.45 (d, J = 9.4 Hz, 1H), 8.39–8.35 (m, 1H), 8.34 (d, J = 8.9 Hz, 1H), 8.07 (d, J = 9.2 Hz, 1H), 7.76 (s, 1H), 7.03 (s, 2H), 4.64–4.40 (m, 3H), 3.80 (s, 2H), 3.27–3.12 (m, 1H), 2.93 (d, J = 11.7 Hz, 1H), 2.83 (s, 2H), 2.44–2.35 (m, 7H), 2.31–2.20 (m, 1H), 2.14–2.05 (m, 1H), 2.04 (s, 6H), 2.00–1.88 (m, 1H), 1.49 (s, 9H).
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-chloro-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyrid-in–6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (30). This compound was prepared by following the general procedure E (white solid, 21% yield). 1H NMR (400 MHz, DMSO-d6) δ 9.02 (d, J = 9.3 Hz, 1H), 8.58 (d, J = 8.9 Hz, 1H), 8.44 (s, 1H),8.32–8.27 (m, 2H), 8.19 (s, 1H), 7.92 (dd, J = 8.7, 2.4 Hz, 1H), 7.46 (d, J = 15.1 Hz, 1H), 7.20–7.07 (m, 1H), 6.51–6.41 (m, 3H), 4.98 (d, J = 89.4 Hz, 2H), 4.54–4.36 (m, 1H), 4.01 (d, J = 35.6 Hz, 2H), 3.09 (t, J = 13.5 Hz, 1H), 2.93–2.77 (m, 3H),2.48–2.36 (m, 1H), 2.27 (s, 3H), 2.25–2.16 (m, 1H), 2.11–1.97 (m, 1H), 1.88–1.78 (m, 1H). 13C NMR (176 MHz, DMSO-d6) δ 165.9 (d, J = 44.8 Hz), 162.7, 160.7, 159.0, 152.7, 151.2, 150.9, 150.2, 140.6, 135.4, 131.8, 129.9, 126.6, 125.8, 122.8, 119.4, 119.3 (t, J = 253.4 Hz) 117.6, 116.2, 113.70 (d, J = 61.5 Hz),112.6 (d, J = 61.0 Hz), 108.0, 59.0 (t, J = 27.5 Hz), 52.7, 49.4 (t, J = 20.2 Hz), 44.7, 42.8 (d, J = 67.3 Hz), 40.2 (d, J = 64.1 Hz),28.1, 20.9 (d, J = 241.9 Hz). HR-MS (ESI) Calcd. for C30H29O3N7F2Cl+ [M + H]+, 608.1988; Found, 608.1990; HPLC purity, 95.9%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-methyl-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyrid-in-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (31). This compound was prepared by following the general procedure E (white solid, 33% yield).1H NMR (400 MHz, CDCl3) δ 8.44 (d, J = 9.5 Hz, 1H), 8.32 (d, J = 8.9 Hz, 1H), 8.23 (d, J = 2.3 Hz, 1H), 8.14 (s, 1H), 8.08 (d, J = 8.9 Hz, 1H), 7.92–7.78 (m, 1H), 7.71–7.60 (m, 2H), 6.85–6.73 (m, 1H), 6.52 (d, J = 8.6 Hz, 1H),4.96–4.68 (m, 4H), 4.55–4.38 (m, 1H), 4.12–3.92 (m, 2H),3.23–3.11 (m, 1H), 2.97–2.83 (m, 3H), 2.59 (s, 3H), 2.47–2.35 (m, 4H), 2.25 (t, J = 11.4 Hz, 1H), 2.15–2.06 (m, 1H), 2.00–1.87 (m, 1H). 13C NMR (176 MHz, CDCl3) δ 166.6, 162.9, 161.2, 159.3, 155.7, 151.3, 150.2, 149.7, 140.9, 136.0, 130.3 (d, J = 31.6 Hz), 128.2, 126.5, 124.9, 124.5 (d, J = 50.6 Hz), 122.6, 121.6, 118.5 (t, J = 245.7 Hz), 116.1 (d, J = 45.5 Hz), 113.8 (d, J = 59.6 Hz), 112.4, 108.7, 60.1 (dd, J = 28.3, 23.6 Hz), 53.6, 50.1 (t, J = 20.5 Hz), 45.5, 43.9 (d, J = 30.3 Hz), 40.8 (d, J = 220.7 Hz), 29.5 (d, J = 6.2 Hz), 21.4 (d, J = 252.5 Hz),15.30. HR-MS (ESI) Calcd. for C31H32O3N7F2+ [M + H]+,588.2535; Found, 588.2532; HPLC purity, 95.7%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-cyclopropyl-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyridin-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (32). This compound was prepared by following the general procedure E (white solid, 35% yield). 1H NMR (700 MHz, CDCl3) δ 8.44 (d, J = 9.5 Hz, 1H), 8.33 (d, J = 8.8 Hz, 1H), 8.24 (s, 1H),8.09–7.99 (m, 2H), 7.74–7.61 (m, 3H), 6.87–6.73 (m, 1H), 6.52 (d, J = 8.5 Hz, 1H), 4.98–4.85 (m, 2H), 4.74 (s, 2H), 4.52–4.43 (m, 1H), 4.02 (d, J = 74.0 Hz, 2H), 3.22–3.15 (m, 1H), 2.93 (d, J = 11.9 Hz, 1H), 2.88 (s, 2H), 2.45–2.33 (m, 5H), 2.28–2.23 (m, 1H), 2.12–2.07 (m, 1H), 1.97–1.90 (m, 1H), 1.15–1.10 (m, 2H), 1.05–1.01 (m, 2H). 13C NMR (176 MHz, CDCl3) δ 166.7, 163.0, 161.3, 159.3, 155.7, 151.3, 150.2, 149.7, 140.9, 136.1, 130.4, 129.1, 128.3, 126.5, 124.9, 121.7, 119.4, 118.5 (t, J = 245.6 Hz), 115.4 (d, J = 42.5 Hz), 113.8 (d, J = 68.0 Hz),112.3, 108.7, 60.1 (d, J = 23.0 Hz), 53.6, 50.1 (t, J = 20.4 Hz),45.5, 43.9 (d, J = 39.3 Hz), 40.9 (d, J = 220.9 Hz), 29.5 (d, J = 6.2 Hz), 21.4 (d, J = 251.2 Hz), 10.3, 8.4 (2C). HR-MS (ESI) Calcd. for C33H34O3N7F2+ [M + H]+, 614.2691; Found, 614.2686; HPLC purity, 95.1%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(3,3,5,5-tetramethylcyclohex-1-en-1-yl)-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyridin-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carb-oxamide (33). This compound was prepared by following the general procedure E (white solid, 34% yield).1H NMR (700 MHz, CDCl3) δ 8.45 (d, J = 9.5 Hz, 1H), 8.35 (d, J = 8.8 Hz, 1H), 8.25 (d, J = 2.3 Hz, 1H), 8.13 (d, J = 8.8 Hz, 1H), 8.11–7.93 (m, 2H), 7.70 (dd, J = 8.6, 2.4 Hz, 1H), 7.66 (d, J = 15.3 Hz, 1H), 6.87–6.74 (m, 1H), 6.53 (d, J = 8.6 Hz, 1H),6.15 (s, 1H), 4.99–4.64 (m, 4H), 4.53–4.43 (m, 1H), 4.03 (d, J = 70.9 Hz, 2H), 3.22–3.13 (m, 1H), 2.93 (d, J = 12.0 Hz, 1H), 2.91–2.83 (m, 2H), 2.46–2.38 (m, 4H), 2.36 (s, 2H), 2.29–2.24 (m, 1H), 2.13–2.07 (m, 1H), 1.98–1.90 (m, 1H), 1.49 (s, 2H),1.16 (s, 6H), 1.09 (s, 6H). 13C NMR (176 MHz, CDCl3) δ 166.7, 163.0, 161.3, 159.3, 153.9, 151.3, 150.2, 149.5, 140.9, 138.4, 136.1, 130.4 (d, J = 27.6 Hz), 129.4, 129.2, 129.0, 126.5, 125.0, 121.9 (d, J = 65.1 Hz), 121.6, 118.5 (t, J = 245.7 Hz), 116.4 (d, J = 40.4 Hz), 113.9 (d, J = 72.7 Hz), 112.0, 108.8, 60.1 (dd, J = 28.3, 23.4 Hz), 53.6, 50.1 (t, J = 20.5 Hz), 49.6, 45.5, 44.0 (d, J = 41.6 Hz), 42.0, 40.8 (d, J = 223.9 Hz), 33.5, 31.7 (2C),31.1, 30.1 (2C), 29.5 (d, J = 6.2 Hz), 21.3 (d, J = 247.6 Hz). HR-MS (ESI) Calcd. for C40H46O3N7F2+ [M + H]+, 710.3630; Found, 710.3632; HPLC purity, 97.8%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4,4-dimethylcyclohex-1-en-1-yl)-1,2,3,4-tetrahy -drobenzofuro[2,3-c]pyridin-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxami-de (34). This compound was prepared by following the general procedure E (white solid, 30% yield). 1H NMR (400 MHz, CDCl3) δ 8.45 (d, J = 9.5 Hz, 1H), 8.34 (d, J = 8.8 Hz, 1H), 8.23 (s, 1H), 8.18–7.94 (m, 2H), 7.73–7.60 (m, 2H), 6.88–6.71 (m, 1H), 6.56–6.47 (m, 2H), 4.99–4.76 (m, 4H), 4.57–4.40 (m, 1H),4.03 (d, J = 36.2 Hz, 2H), 3.24–3.13 (m, 1H), 2.99–2.83 (m, 3H), 2.65 (s, 2H), 2.49–2.35 (m, 4H), 2.26 (t, J = 11.9 Hz, 1H),2.06–1.85 (m, 4H), 1.61 (t, J = 6.3 Hz, 2H), 1.03 (s, 6H). 13C NMR (176 MHz, DMSO-d6) δ 166.0 (d, J = 30.9 Hz), 162.8, 160.7, 160.1, 152.6, 151.3, 150.8, 150.2, 140.5 (d, J = 15.6 Hz), 135.5, 130.9, 130.3, 128.8, 128.2, 128.1, 126.8, 126.4, 125.5, 120.9, 119.4, 119.3 (dd, J = 242.5, 4.9 Hz), 116.7, 113.2, 112.9 (d, J = 36.7 Hz), 112.4 (d, J = 28.9 Hz), 108.0, 59.0 (dd, J = 28.9, 23.6 Hz), 52.7, 49.3 (t, J = 20.1 Hz), 44.7, 42.9 (d, J = 65.5 Hz), 40.3 (d, J = 89.0 Hz), 35.2, 28.2 (d, J = 6.5 Hz),28.0 (2C), 25.1, 20.8 (d, J = 255.6 Hz). HR-MS (ESI) Calcd. for C38H42O3N7F2+ [M + H]+, 682.3317; Found, 682.3312; HPLC purity, 95.7%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(thiophen-3-yl)-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyridin-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (35). This compound was prepared by following the general procedure E (white solid, 36% yield). 1H NMR (400 MHz, CDCl3) δ 8.45 (d, J = 9.5 Hz, 1H), 8.37 (d, J = 8.8 Hz, 1H), 8.35–8.27 (m, 1H),8.25 (d, J = 2.3 Hz, 1H), 8.20 (s, 1H), 8.15 (d, J = 8.8 Hz, 1H),8.05 (d, J = 3.8 Hz, 1H), 7.76 (dd, J = 5.0, 1.3 Hz, 1H), 7.72–7.62 (m, 2H), 7.49 (dd, J = 5.0, 3.0 Hz, 1H), 6.88–6.73 (m, 1H), 6.53 (d, J = 8.6 Hz, 1H), 4.96 (s, 2H), 4.74 (s, 2H),4.57–4.41 (m, 1H), 4.16–3.95 (m, 2H), 3.25–3.14 (m, 1H),2.99–2.85 (m, 3H), 2.48–2.35 (m, 4H), 2.27 (t, J = 11.8 Hz, 1H),2.15–2.06 (m, 1H), 2.02–1.87 (m, 1H). 13C NMR (176 MHz, CDCl3) δ 166.7, 162.9, 161.0, 159.3, 153.4, 151.8, 150.4, 149.7, 141.0, 136.1, 135.9, 130.8 (d, J = 26.6 Hz), 129.5, 127.1, 126.6, 126.1, 125.0, 124.2, 122.1 (d, J = 62.0 Hz), 121.7, 121.2, 118.5 (d, J = 245.2 Hz), 116.8, 113.8 (d, J = 66.5 Hz), 112.4, 108.7, 60.1 (dd, J = 28.5, 23.4 Hz), 53.6, 50.2 (t, J = 20.5 Hz), 45.6, 44.0 (d, J = 50.7 Hz), 40.8 (d, J = 226.1 Hz), 29.5 (d, J = 6.3 Hz), 21.4 (d, J = 255.0 Hz). HR-MS (ESI) Calcd. for C34H32O3N7F2S+ [M + H]+, 656.2255; Found, 656.2258; HPLC purity, 96.0%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(p-tolyl)-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyri-din-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (36). This compound was prepared by following the general procedure E (white solid, 35% yield).1H NMR (700 MHz, CDCl3) δ 8.46 (d, J = 9.5 Hz, 1H), 8.36 (d, J = 8.8 Hz, 1H), 8.31–8.11 (m, 4H), 7.80 (d, J = 7.7 Hz, 2H), 7.72–7.59 (m, 2H), 7.35 (d, J = 7.8 Hz, 2H), 6.88–6.68 (m, 1H), 6.52 (d, J = 8.5 Hz, 1H), 4.91 (d, J = 39.9 Hz, 2H), 4.73 (s, 2H), 4.54–4.43 (m, 1H), 4.05 (d, J = 73.4 Hz, 2H), 3.22–3.14 (m, 1H), 2.97–2.86 (m, 3H), 2.45 (s, 3H), 2.43–2.37 (m, 4H), 2.26 (t, J = 11.7 Hz, 1H), 2.13–2.08 (m, 1H), 1.99–1.91 (m, 1H). 13C NMR (176 MHz, CDCl3) δ 166.7, 162.9, 161.1, 159.3, 153.8, 151.8, 150.3, 149.7, 141.0, 138.4, 136.1, 132.7, 130.8, 129.6 (2C), 129.5, 128.7 (2C), 126.6, 126.5, 125.0, 123.0 (d, J = 56.3 Hz), 121.6, 118.5 (t, J = 245.6 Hz), 117.1 (d, J = 44.1 Hz), 113.7 (d, J = 65.9 Hz),112.4, 108.8, 60.0 (d, J = 23.9 Hz), 53.6, 50.1 (t, J = 20.6 Hz),45.5, 43.9 (d, J = 49.4 Hz), 40.8 (d, J = 225.5 Hz), 29.5 (d, J = 5.8 Hz), 21.4, 21.3 (d, J = 256.5 Hz). HR-MS (ESI) Calcd. for C37H36O3N7F2+ [M + H]+, 664.2848; Found, 664.2845; HPLC purity, 97.0%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(2-fluoro-4-methylphenyl)-1,2,3,4-tetrahydrobe-n-zofuro[2,3-c]pyridin-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (37). This compound was prepared by following the general procedure E (white solid, 42% yield).1H NMR (700 MHz, CDCl3) δ 8.45 (d, J = 9.3 Hz, 1H), 8.39–8.30 (m, 2H), 8.22 (s, 1H), 8.12 (d, J = 8.9 Hz, 1H), 8.10–7.99 (m, 1H), 7.72–7.59 (m, 2H), 7.54 (s, 1H), 7.11 (d, J = 8.1 Hz, 1H), 7.07 (d, J = 11.6 Hz, 1H), 6.87–6.67 (m, 1H), 6.51 (s, 1H), 4.98–4.65 (m, 4H),4.53–4.42 (m, 1H), 4.03 (d, J = 72.1 Hz, 2H), 3.18 (s, 1H),2.98–2.84 (m, 3H), 2.44 (s, 3H), 2.43–2.36 (m, 4H), 2.30–2.21 (m, 1H), 2.14–2.06 (m, 1H), 1.98–1.90 (m, 1H). 13C NMR (176 MHz, CDCl3) δ 166.6, 162.9, 161.0, 159.8 (t, J = 248.8 Hz),159.3, 154.1, 151.9, 150.3, 149.6, 141.1, 140.9, 136.0, 131.3, 130.6 (d, J = 35.9 Hz), 129.2, 126.6, 125.2, 125.0, 124.7 (d, J = 38.1 Hz), 121.6, 121.1, 120.3, 118.5 (t, J = 245.6 Hz), 117.9 (d, J = 41.9 Hz), 116.8 (d, J = 22.3 Hz), 113.7 (d, J = 59.0 Hz),112.4, 108.7, 60.0 (t, J = 26.1 Hz), 53.6, 50.1 (t, J = 20.0 Hz),45.5, 43.9 (d, J = 43.8 Hz), 40.8 (d, J = 230.8 Hz), 29.5, 21.4, 21.3 (d, J = 250.3 Hz). HR-MS (ESI) Calcd. for C37H35O3N7F3+ [M + H]+, 682.2753; Found, 682.2755; HPLC purity, 98.4%.
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-mesityl-1,2,3,4-tetrahydrobenzofuro[2,3-c]pyrid-in-6-yl)-N-(3,3-difluoro-1-methylpiperidin-4-yl)pyridazine-3-carboxamide (38). This compound was prepared by following the general procedure E (white solid, 38% yield).1H NMR (400 MHz, CDCl3) δ 8.44 (d, J = 9.5 Hz, 1H), 8.39 (s, 1H), 8.33 (d, J = 8.8 Hz, 1H), 8.21 (s, 1H), 8.07 (d, J = 8.8 Hz, 1H), 7.85–7.54 (m, 3H), 7.02 (s, 2H),6.87–6.61 (m, 1H), 6.51 (d, J = 8.6 Hz, 1H), 4.92–4.69 (m, 4H),4.54–4.39 (m, 1H), 4.15–3.91 (m, 2H), 3.24–3.09 (m, 1H),2.99–2.83 (m, 3H), 2.48–2.40 (m, 1H), 2.39 (s, 3H), 2.37 (s, 3H),2.26 (t, J = 11.9 Hz, 1H), 2.12–2.07 (m, 1H), 2.04 (s, 6H),2.00–1.90 (m, 1H). 13C NMR (176 MHz, CDCl3) δ 166.6, 162.9, 161.2, 159.3, 154.4, 151.9, 150.3, 149.6, 140.9, 138.1, 136.8 (2C), 136.0 (d, J = 33.8 Hz), 132.1, 130.6 (d, J = 32.6 Hz), 129.0, 128.5 (2C), 126.5, 125.6, 125.0, 124.8, 121.6, 118.4 (t, J = 245.7 Hz) 117.4 (d, J = 49.9 Hz), 113.7 (d, J = 53.4 Hz),112.4, 108.8, 60.0 (dd, J = 28.9, 23.2 Hz), 53.6, 50.1 (t, J = 20.4 Hz), 45.5, 43.9 (d, J = 48.6 Hz), 40.7 (d, J = 242.6 Hz), 29.4 (d, J = 6.2 Hz), 22.1, 21.3, 20.7 (2C). HR-MS (ESI) Calcd. for C39H40O3N7F2+ [M + H]+, 692.3161; Found, 692.3165; HPLC purity, 95.2%.
Tert-butyl 8-(4-fluorophenyl)-6-(5-(methoxycarbonyl)pyridin-2-yl)-3,4-dihydrobenzofuro[2,3-c]pyridine-2(1H)-carboxylate (A67). Replacing K8 with methyl 6-bromonicotinate. This compound was prepared by following the general procedure F (white solid, 65% yield). 1H NMR (400 MHz, CDCl3) δ 9.29 (s, 1H),8.36 (d, J = 8.3 Hz, 1H), 8.13 (s, 1H), 8.07 (s, 1H), 7.92–7.84 (m, 3H), 7.24–7.18 (m, 2H), 4.64 (s, 2H), 3.98 (s, 3H), 3.80 (s, 2H), 2.82 (s, 2H), 1.51 (s, 9H).
Methyl (E)-6-(2-(3-(6-aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenz-ofuro[2,3-c]pyridin-6-yl)nicotinate (A68). This compound was prepared by following the general procedure E (white solid, 62% yield). 1H NMR (400 MHz, CDCl3) δ 9.29 (s, 1H), 8.36 (d, J = 8.4 Hz, 1H), 8.23 (s, 1H), 8.14 (s, 1H), 8.08 (s, 1H), 7.94–7.82 (m, 3H), 7.71–7.58 (m, 2H), 7.25–7.16 (m, 2H), 6.87–6.68 (m, 1H), 6.52 (d, J = 8.5 Hz, 1H),4.99–4.73 (m, 4H), 4.13–3.90 (m, 5H), 2.91 (s, 2H).
(E)-6-(2-(3-(6-Aminopyridin-3-yl)acryloyl)-8-(4-fluorophenyl)-1,2,3,4-tetrahydrobenzofu-ro[2,3-c]pyridin-6-yl)-N-(2-(3-(but-3-yn-1-yl)-3H-diazirin-3-yl)ethyl)nicotinamide (39). To a solution of A68 (38 mg, 0.07 mmol) in a mixed solvent (0.6 mL THF,0.2 mL H2O), LiOH H2O (5 mg, 0.12 mmol) was added. The mixture was stirred at room temperature overnight, and acidified with 4 mol/L hydrochloric methanol solution. After evaporation of the solvent, the crude product A69 was obtained and dissolved in DMF (1 mL). 2-(3-(But-3-yn-1-yl)-3H-diazirin-3-yl)ethan-1-amine (14 mg, 0.10 mmol), HATU (53 mg, 0.14 mmol) and Et3N (48 μL, 0.35 mmol) were added. The mixture was stirred at room temperature for 3 h, diluted with ethyl acetate, and washed with brine. The organic layer was dried over Na2SO4, and concentrated in vacuo. The residue was purified using a silica gel column to afford 39 (white solid, 20 mg, 44% yield over two steps). 1H NMR (400 MHz, CDCl3) δ 9.08 (d, J = 2.2 Hz, 1H), 8.21 (s, 1H), 8.17 (dd, J = 8.3, 2.3 Hz, 1H), 8.03 (s, 1H), 8.00 (s, 1H), 7.87–7.78 (m, 3H), 7.69–7.57 (m, 2H), 7.18 (t, J = 8.6 Hz, 2H), 6.86–6.68 (m, 2H),6.50 (d, J = 8.6 Hz, 1H), 4.84 (s, 4H), 3.98 (d, J = 37.5 Hz, 2H),3.37 (q, J = 6.4 Hz, 2H), 2.84 (s, 2H), 2.08–2.00 (m, 3H), 1.86 (t, J = 6.6 Hz, 2H), 1.70 (t, J = 7.1 Hz, 2H). 13C NMR (176 MHz, CDCl3) δ 166.7, 165.8, 162.7 (d, J = 247.9 Hz), 159.9, 159.4, 153.0, 150.6 (d, J = 232.8 Hz), 149.6, 148.10, 141.0, 136.1, 136.0 (d, J = 15.8 Hz), 134.1 (d, J = 33.6 Hz), 132.0, 130.5, 130.4, 129.1, 128.1, 124.7, 123.0 (d, J = 54.6 Hz), 121.5, 120.1, 117.0 (d, J = 61.1 Hz), 115.8, 115.7, 114.0 (d, J = 33.6 Hz), 112.9 (d, J = 202.7 Hz), 108.7, 82.9, 69.7, 43.9 (d, J = 40.2 Hz), 40.8 (d, J = 224.6 Hz), 35.2, 32.5, 32.2, 27.1, 21.4 (d, J = 249.9 Hz), 13.3. HR-MS (ESI) Calcd. for C38H33O3N7F+ [M + H]+, 654.2629; Found, 654.2619; HPLC purity, 98.0%.
All cell lines were cultured in a humidified atmosphere in 5% CO2 at 37 ℃. MIA PaCa-2, PANC-1, BxPC-3 cells were purchased from American type culture collection (ATCC, Manassas, VA, USA). AsPC-1, HPAF-II, hTERT-HPNE cells were purchased from Cobioer Biosciences Co., Ltd. (Nanjing, China). Pan02 cells were purchased from Shanghai Zishi (Shanghai, China). CFPAC-1 cells were purchased from Procell Life Science & Technology Co., Ltd. (Wuhan, China). U-2 OS cells were obtained from National Collection of Authenticated Cell Cultures.
MIA PaCa-2 cells were cultured in DMEM medium with 10% fetal bovine serum, 2.5% horse serum, and 1% penicillin-streptomycin. AsPC-1 cells and BxPC-3 cells were cultured in RPMI-1640 medium with 10% fetal bovine serum and 1% penicillin-streptomycin. Pan02 cells and PANC-1 cells were cultured in DMEM medium with 10% fetal bovine serum and 1% penicillin-streptomycin. HPAF-II cells were cultured in MEM medium with 10% fetal bovine serum, 1% NEAA, 1% NaP, and 1% penicillin-streptomycin. CFPAC-1 cells were cultured in IMDM medium with 10% fetal bovine serum, and 1% penicillin-streptomycin. hTERT-HPNE cells were cultured in DMEM medium with 25% M3 medium, 5% fetal bovine serum, and 10 ng/mL EGF. U-2 OS cells were cultured in McCoy’s 5a medium with 10% fetal bovine serum and 1% penicillin-streptomycin.
Cells were seeded in 96-well plates at a density of 1500 cells per well overnight and subsequently treated compounds at different concentrations. After 72 h of incubation, the anti-proliferation effects of compounds were evaluated through Cell Counting Kit-8 (Life iLab, #D3100L4053, Shanghai, China). The OD values were detected using the SPECTRAmax PLUS (Molecular Devices). The IC50 Value was calculated via the software of the instrument. The experiments were repeated at least three times.
MIA PaCa-2 cells were seeded in 6-well plates overnight and treated with the indicated dose of tested compounds for 72 h. The treated cells were lysed with 2% (w/v) SDS, 1% glycerol, 0.01% Bromophenol blue, and 62.5 mmol/L Tris-HCl (pH: 6.8) and denatured at 100 ℃ for 20 min. The lysates were loaded onto 10% SDS-PAGE (Epizyme, PG004, Shanghai, China) and transferred to nitrocellulose membranes. Membranes were blocked with 5% skim milk-TBST for 1 h at room temperature and blotted with primary antibodies. Primary antibodies used in this article include: β-Catenin (D10A8) XP® Rabbit mAb (Cell Signaling Technology, 8480s, Cambridge, MA, USA), phospho-β-catenin (Ser675) (Cell Signaling Technology, 4176s), PAK4 (Proteintech, 14685-1-AP, Rosemont, IL, USA), PAK4(Ser474) (Biovision, A1973-100, Cambridge, UK), Cyclin D1 (92G2) Rabbit mAb (Cell Signaling Technology, 2978S), c-Myc (E5Q6W) Rabbit mAb (Cell Signaling Technology, 18583S), Bim (C34C5) Rabbit mAb (Cell Signaling Technology, 2933S), Bcl-xL (54H6) Rabbit mAb (Cell Signaling Technology, 2764S), beta Actin Monoclonal Antibody (2D4H5) (Proteintech, 66009-1-IG).
MIA PaCa-2 cells were washed with cold PBS and resuspended in protein lysis buffer (NP40 lysis buffer, Beyotime, P0013F, Shanghai, China). The cells were sonicated for 20 s and centrifuged for 30 min at 15,000×g at 4 ℃. The supernatant was collected and the protein concentration was adjusted to 1 mg/mL by using the BCA Protein Quantification Kit (Yeasen Biotechnolog Co., Ltd., 20201ES76, Shanghai, China). The samples were treated with different compounds on a shaker for 60 min at room temperature. Then the samples were irradiated under UV light (365 nm) for 30 min on ice. The following reagents were added sequentially for the click reaction: TCEP-HCl (50 mmol/L), CuSO4 (50 mmol/L), TBTA (1.7 mmol/L), and Biotin-N3 (1.25 mmol/L). After the click reaction, the samples were rotated for 2 h at room temperature. The proteins were then precipitated by cold acetone for 2 h and washed by methanol. The samples were resuspended with pull-down buffer (0.2% SDS/PBS) and the protein concentrations were normalized. Before streptavidin beads (Thermo Fisher Scientific, Pierce™ Streptavidin Magnetic Beads, 88,816, Waltham, MA, USA) were added, 50 μL of each sample was left behind as the input for the Western blot. The streptavidin beads were added to samples, and the mixtures were incubated for 4 h with rotation under room temperature. The pull-down proteins were analyzed by Western blotting.
The experiment was conducted with Biacore 8K instrument (GE Healthcare, Uppsala, Sweden). The recombinant PAK4 kinase domain (300‒591) was coupled on CM5 chip (Cytiva, Washington, D.C., USA). The test compound 25 (HCl salt) was firstly dissolved in H2O as 125 μmol/L stock, and then diluted in PBST buffer as a mobile phase flowing through PAK4 coupled chip. The dissociation constant was calculated in kinetic analysis mode using Biacore evaluation software. The final figure was displayed using GraphPad (version 8.0).
Using the same PAK4 kinase domain immobilized CM5 chip, SPR A-B-A competition assay was performed following “ABA” method in the same instrument. Compounds 1 and 25 were firstly dissolved in DMSO as 20 mmol/L stocks, and then diluted in a PBST running buffer containing 5% DMSO. First, Compound 1 (5 μmol/L) was injected over the surface of the chip for 180 s. Then the same concentration of compound 1 was injected with different concentration gradient 25 (2.5–80 μmol/L) for 180 s. The final figure was displayed using GraphPad (version 8.0).
Cell apoptosis was evaluated using the Annexin V-FITC/PI Apoptosis Detection Kit (Vazyme, Nanjing, China). MIA PaCa-2 cells were seeded in 6-well plates overnight at a density of 5 × 104/well and treated with different concentrations of compound 13 and 4 for 72 h. After the incubation, the treated cells were trypsinized and stained with Annexin V-FITC and PI for 10 min. The apoptotic cells were analyzed using a CytoFLEX (Beckman Coulter, Brea, CA, USA).
Animal experiments were conducted under the guidance of the Institutional Animal Care and Use Committee of the Shanghai Institute of Materia Medica (approval number: 2023-01-DJ-73). To examine the in vivo antitumor activity of 13, 5 × 106 MIA PaCa-2 cells were implanted subcutaneously into the right flanks of nude mice. After the tumor volume reached 50‒100 mm3, the mice were randomly assigned into the Control group (n = 8) and treatment groups (n = 8). Compounds 13 and 4 were formulated in 5% DMSO, 60% PEG400, and 35% saline. The control group was given vehicle (5% DMSO, 60% PEG400, and 35% saline) only, and the treatment groups were treated with compounds 13 and 4 (100 mg/kg, q.d.) intraperitoneally. Tumor volumes were examined three times per week by measuring two perpendicular dimensions using a caliper.
Pan02 cells were injected subcutaneously into the right flanks of syngeneic C57BL/6 mice at a density of 5 × 106 per mouse. After the tumor volume reached 50‒100 mm3, the mice were randomly assigned into the Control group (n = 8) and treatment groups (n = 8). The control group was given vehicle (5% DMSO, 60% PEG400, and 35% saline) only, and the treatment groups were treated with compounds 13 and 4 (100 mg/kg) intraperitoneally three times per five days. Body weights and tumor volumes were measured twice per week. The tumor volume was calculated as Eq. (1):
Tumor-bearing mice were sacrificed after treatment. The tumor tissue was fixed via 4% paraformaldehyde for over 24 h. Then, the tumor samples were transferred to 70% ethanol and embedded in paraffin wax. Immunohistochemistry experiments were conducted by Shanghai Zuocheng Biotechnology. Images were analyzed by NDP.scan3.2.15. β-Catenin (D10A8) XP® Rabbit mAb (Cell Signaling Technology, 8480s) was used in this study. Expression level of β-Catenin was assessed using the multiplicative score method.
Tumor tissue was dissociated enzymatically (Miltenyi Biotec, 130-096-730, Cologne, Germany) to obtain a single-cell suspension. The single-cell suspension was filtered and centrifuged at 300×g. The CD45+ cells were isolated through CD45 MicroBeads (Miltenyi Biotec, 130-110-618). Surface markers were stained by the antibody cocktail for 30 min at 4 ℃. Cells were resuspended with Maxpar Cell Staining Buffer (CSB, Fluidigm, San Francisco, CA, USA) and incubated with 0.5 μmol/L cisplatin (Fluidigm) for 5 min. After centrifugation at 500×g for 6 min, the cells were stained with 500 μL of 50 nmol/L Ir for 1 h at 4 ℃. Add 1.5 mL CSB to the samples and gently mix the cells after centrifugation at 500×g for 6 min. The samples were then loaded onto the Helios sample loader for data acquisition. Data were collected with Cytobank 7.3.0 (Beckman Coulter) and analyzed using FlowJo (V.10.0).
Statistical data are expressed as means ± standard deviation (SD). Comparisons between different groups were performed with Student’s t-test or variance (ANOVA) as appropriate using GraphPad Prism (ver. 8.0). Values of P < 0.05 were considered statistically significant (*P < 0.05; **P < 0.01; ***P < 0.001).
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Year 2025 volume 15 Issue 1
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doi: 10.1016/j.apsb.2024.10.002
  • Receive Date:2024-05-22
  • Online Date:2026-09-17
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  • Received:2024-05-22
  • Revised:2024-09-09
  • Accepted:2024-09-10
Affiliations
    aShanghai Frontiers Science Center of Drug Target Identification and Delivery, School of Pharmaceutical Sciences, Shanghai Jiao Tong University, Shanghai 200240, China
    bState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
    cNational Key Laboratory of Innovative Immunotherapy, Shanghai Jiao Tong University, Shanghai 200240, China
    dUniversity of Chinese Academy of Sciences, Beijing 100049, China
    eZhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
    fHangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China

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表12种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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