The confirmation of fibril-forming protein was achieved through immunoblot and immunogold labeling analysis, which showed partial recognition of brain extracts from
Tg-gp120 mice by the gp120 antibody (Fig. S3C and S3D). These findings were consistent with the results obtained from ThT/IF/nuclei triple staining (
Fig. 1E) and Congo red/IHC double staining (Fig. S3E). Additionally, we investigated the levels of endogenous
β-amyloid (A
β) and Tau protein, two pathological markers associated with HIV-induced neurodegeneration and Alzheimer's disease development. No difference was observed in A
β1–42 levels between
Tg-gp120 and WT mice in brain sections, CSF, or serum (Supporting Information Fig. S4A–S4D). However, phosphorylated Tau at Ser396 was specifically activated in 16-month-old
Tg-gp120 mice (Fig. S4E–S4H), prompting that gp120 may not be the sole source of amyloid material. Furthermore, we performed LC–MS/MS analysis to identify peptides derived by gp120 (Supporting Information Fig. S5). Initially, a total of 12 highly abundant peptides were discovered and subjected to
in vitro aggregation testing as well as biochemical characterization (Supporting Information Table S1). Preliminary secondary structure and neuronal cytotoxicity analysis screened that GP-3-6 (aa.THGIRPVVSTQLLL) exhibited a transition to a typical
β-fold conformation and neuronal damage effects upon induction (Supporting Information Fig. S6). This peptide is situated between two antiparallel
β-sheets within the invariant region C2 flanked by V2–V3 loops of gp120 (Supporting Information Fig. S7A). Further characterization involving Congo red staining, ThT binding assays, circular dichroism (CD) spectroscopy, atomic force microscopy, and TEM analysis were conducted to elucidate the fibril formation process associated with GP-3-6 peptide behavior (
Fig. 1F and G, Fig. S7B–S7G). Moreover, gp120 recognition towards fibrotic GP-3-6 could be observed through immunological assays conducted
in vitro (Fig. S7H), and this recognition displayed concentration-dependent characteristics (Fig. S7I and S7J). Further, sequence conservation of GP-3-6 was confirmed by gp120 library matching in the UniProtKB library (
https://www.uniprot.org/blast). Following this, we investigated the presence of such amyloid fibrils in HAND patients and explore underlying mechanisms causing nerve damage.