The biogenic silica of sediment samples from Core CJ01-185 which is collected from the eastern India Ocean off the Sunda Strait is analyzed to evaluate the impact of the opening of the Sunda Strait on a paleoproductivity evolution. The new results indicate that the biogenic silica mass values of Core CJ01-185 show the lowest 0.86% in the last glacial period, and reach its maxima of 1.89% in the late Holocene. Furthermore, the biogenic silica mass accumulation rate (MAR_BSi) values also vary with much higher during the late Holocene than during the last glaciation. The input of additional terrigenous materials from the Java Sea has enhanced the paleoproductivity and increased the biogenic silica mass and MAR_BSi values after the opening of the Sunda Strait. It is suggested that the paleoproductivity in the study area is mainly influenced by the southeast monsoon and upwelling before the opening of the Sunda Strait. However, the paleoproductivity is dominated by the terrigenous materials input other than by the southeast monsoon or upwelling in the Holocene.

In this study, echolocation signals were recorded from a wild Irrawaddy dolphin (Orcaella brevirostris) in shallow water in the Bay of Brunei. During sound recording, a small fishing boat engine startled a nearby Irrawaddy dolphin and began chasing it on two occasions. Variations in the acoustic parameters were detected. When the Irrawaddy dolphin was startled and chased, the sound pressure level, number of click trains per minute, pulse number, and average inter-pulse interval (PI) per click train were all affected. The PI increased and exhibited a slight downward trend during the chase. The increase in PI indicated an increase in the inspection distance as the dolphin escaped. Thus, Irrawaddy dolphins may adapt their echolocation signals to stand out from ambient noise in the wild and to improve their search efforts in potentially risky situations. Appropriate management of the burst noise around the dolphins is important.

A numerical model for jellyfish Rhopilema esculentum stock enhancement is developed for the first time. The model is based on an operational ocean circulation-surface wave coupled forecasting system for the seas off China and adjacent areas and uses a Lagrangian particle-tracking scheme to track the trajectories of released jellyfish. The Jellyfish are modeled as particles with diel vertical migration and are passively drifted by the current and dispersion due to the sub-grid processes. A comparison between the simulation and survey results demonstrate that the model can capture the primary distribution patterns of the released jellyfish. The model results show that the ocean current and indirect wind impact are the main drivers controlling the jellyfish transport. A connectivity matrix between the release sites and fishing grounds indicates the top of the bay is better than the eastern and western coasts for jellyfish fishing. The matrix also shows that only 45% and 27% of the jellyfish released from Wafangdian (WFD) can enter the fishing ground in 2008 and 2010; thus, the site near WFD is not an advisable location for jellyfish release. A Lagrangian probability density function based on a nine-year tracing experiment validates the results and further provides a “climatology” distribution of the released jellyfish. Several experiments are conducted to examine the sensitivity of the model to random walk schemes and to release conditions. The model requires a random walk but is insensitive to the random walk scheme. The experiments with different habitat depths show that if the jellyfish are fixed on the bottom of the water, most of them will be transported to the center, or even out of the bay, by the bottom circulation.

There were two severe coral bleaching events at Ko Khang Khao, the inner Gulf of Thailand, occurred during the prolonged period of the elevated sea surface temperature (SST) in 2010 and low salinity as well as turbidity due to heavy flooding in 2011. The bleaching index (BI) and mortality index (MI) are calculated to compare the susceptibilities of coral species in the two bleaching events. The BI and MI vary significantly among the study sites and bleaching events. The most susceptible corals during both bleaching events are Acropora millepora, Pocillopora damicornis and Pavona decussate, while the most resistant species were Galaxea fascicularis, Fungia fungites, Pavona frondifera, Oulastrea crispate, and Symphyllia recta. The corals Favia favus, Goniopora columna, Platygyra pini, Symphyllia agaricia were relatively more tolerant to high SST but they are relatively more susceptible to low salinity. Coral bleaching is a phenomenon that the dissociation stress of the symbiotic relationship between zooxanthellae and their cnidarian host results in the reduction in photosynthetic pigment concentration. Among stressors, both prolonged exposure of high SST and low salinity, above and below their thresholds, respectively. The long-term resilience of coral communities at Ko Khang Khao and other coral communities close to the mouth of large rivers may depend on the frequency and duration of the exposure on the elevated SST due to atmospheric heating and low salinity due to river flooding.

The Province of Khanh Hoa, Vietnam, is located in the western South China Sea and boasts a shoreline of 385 km and many islands. Previous studies have indicated the extreme diversity and abundance of coral reefs in its waters as compared with other coastal provinces of Vietnam. A study on the resilience of coral reefs against increased surface water temperature and anthropogenic impact is conducted at 19 reef sites in 2015. At each site, a series of parameters (e.g., coral covers, genus diversity, and coral recruitment, substratum heterogeneity, depth, water exchange level, and sediment deposit and water temperature) are measured quantitatively or semi-quantitatively. The measured data are rated based on the relationship between the parameter values and coral susceptibility; the consideration that reef health reflects the biological capability to adapt to environmental changes and the recruitment potential if bleached; and positive or negative influences of physical factors in the mitigation of thermal stress and protecting corals from bleaching. A cumulative analysis enables researchers to divide the studied reefs into four categories based on varying levels of reef health to support resilience, recovery, and vulnerability in the case of increased water temperature. Relevant management interventions for each category and other supporting activities are suggested to enhance management effectiveness and to plan the rehabilitation of coral reefs for biodiversity conservation and touristic development, taking into account the involvement of related stakeholders.

In this study, we assess coral health by detecting the severity of coral diseases and compromised health states on massive Porites. Field surveys are conducted at twenty-two sites covering the eastern, inner and western Gulf of Thailand as well as the Andaman Sea during 2010–2015. A total of nine coral diseases and signs of compromised health are observed in the waters of Thailand, consisting of pigmentation responses (pink lines, pink patches, pink spots and pink borers), white syndromes (white patches, white bands and ulcerative white spots), growth anomalies, and unusual bleaching patterns. The highest severity of all observed coral diseases and signs of compromised health are found at Ko Khang Khao in the inner Gulf of Thailand, while that observed in the Andaman Sea is relatively low. Composition of the diseases vary across the study sites. Four groups of study sites, in which there is an 80% similarity of diseases or signs of compromised health composition, are clustered and detected based on the Bray-Curtis similarity. The canonical analysis of principal coordinates reveal that most study sites in the Gulf of Thailand, especially the inner Gulf of Thailand, tend to show a high severity of the diseases. The association of disease severity and composition and the level of human impact are also detected. The study sites located near the shores and/or the areas with intensive tourism tend to have higher human impact, especially on poor water quality, which may be linked to the higher severity and composition of coral diseases and signs of compromised health in the Gulf of Thailand. Fish bites are also observed in many study sites. The severity of fish bites in the Gulf of Thailand is much lower compared to the Andaman Sea. Ko Rawi exhibits the highest severity, following by Ko Surin Nua and Ko Butang. The study sites within marine national park boundaries have a significantly higher severity of fish bites than those outside of the marine national park boundaries. This study suggests that higher coral diseases and signs of compromised health severity might be linked to anthropogenic disturbances on coral communities in the waters of Thailand.

Cultivable bacteria coexisting in the cultures of two microalgal species, Chattonella marina (Raphidophyceae) and Skeletonema costatum (diatom, Bacillariophyceae), which have been maintained in the laboratory for several years, were examined in this study. Forty-eight and thirty-four cultivable bacterial strains were isolated from different growth stages of C. marina and S. costatum cultures, respectively. A total of twelve unique bacterial phylotypes were isolated. These bacterial phylotypes belonged to Alphaproteobacteria, Gammaproteobacteria, Bacteroidetes, and Actinobacteria. Alphaproteobacteria predominated in phycospheres of both microalgae, and Rhodobacteraceae was the most common family. Bacterial phylotypes were more diversified in cultures of S. costatum than in those of C. marina. Bacterial concentrations increased remarkably after the late stationary phase of C. marina, which might account for the decline in algal cells. One phylotype of S. costatum-associated bacteria had inhibitory effects on Chaetoceros curvisetus (Bacillariophyceae). However, most bacterial phylotypes from cultures of C. marina showed significant inhibition of the growth of C. curvisetus. The results suggested that bacteria associated with C. marina might have some ecological roles in its competition with diatoms.

Suspended particulate matter (SPM) has been known as an important variable in the organic matter flow of coastal ecosystem. Half of burial carbon in seagrass meadows is contributed by allochthonous sources that compose the SPM such as phytoplankton, seagrass detritus, marine snow aggregates and terrestrially derived particles. Each composition of the SPM contributes different roles and is important to be identified, for instance, the exact contribution of seagrass detritus will be useful for determination of carbon export through the detritus form in seagrass meadows. Here, the SPM of seagrass meadows is studied in Bintan Island and the Selayar Archipelago. The aim of this research is to determine the source origin of the SPM using a stable isotope signature. In order to fulfill this aim, the objectives are defined as: (1) to specify the stable isotope signature (δ¹³C and δ¹⁵N) of the SPM, and (2) to determine the proportional distribution of the SPM’s prospectus sources. The result shows that the possibility of the source origin of the SPM includes a seagrass fraction (Enhalus acoroides and Thalassia hemprichii), terrestrial C4 plant, macroalgae, and terrestrial C3 plant. The SPM lies between the marine- and terrigenous-end members. However, it seems that the SPM is more to be terrigenous-end and allochthonous. According to a Bayesian mixing model, the terrestrial C4 has the highest contribution of the SPM at all sites except Barugaia and Pasi Island in Selayar (i.e., the highest contribution of the SPM is from the detritus of E. acoroides). The second contribution has been contributed by either seagrass detritus (E. acoroides or Th. hemprichii) or terrestrial C3 plant. The finding of this study indicates that there is a strong influence of the terrigenous sources in the SPM of the seagrass meadows.

Seagrass beds degraded significantly since the last century on both, global and local scale. The seagrass species Enhalus acoroides (Linnaeus f.) Royle is a common species found in almost all marine ecosystems including bays, lagoons and around offshore islands in tropical regions of the West Pacific. It was shown that genetic diversity is an essential indicator of the conditions of ecosystems. In the present study, microsatellite markers were used to assess the genetic diversity and population structure of six distinct seagrass beds along the coast of the Khanh Hoa Province, Vietnam. The results indicate that the genetic diversity of the populations in the open sea is higher than in the lagoon. Seagrass beds occurring in disturbed sites show reduced genetic diversity. The fixing index value (F_ST) depicts a relatively high genetic structure among populations. Structure analysis clusters the populations into open sea and lagoon populations and cluster analysis and AMOVA indicate a significant difference between the two groups. There are low but non-significant positive correlations between geographic and genetic distances. The different habitats of the open sea and the lagoon are probably responsible for forming two groups.

Size-based partitioning of phytoplankton is a useful tool for monitoring key phytoplankton traits, and it provides a better understanding of phytoplankton dynamics. Our aim is to determine the variation in the different size classes of phytoplankton to the total phytoplankton biomass during the spring and autumn of 2010 and examine the relationship between phytoplankton size structure and environmental variables and zooplankton community structure near the Changjiang Estuary. In the spring, phytoplankton populations were predominantly consisted of nanophytoplankton throughout the study region. In the autumn, picophytoplankton and nanophytoplankton collectively dominated the phytoplankton community. A Pearson correlation analysis highlighted the role of temperature and trophic conditions on the contributions of nanophytoplankton and picophytoplankton. The grazing pressure exerted by mesozooplankton could have played an important role in determining the microphytoplankton community structure.