Marine sediments represent a major carbon reservoir on Earth. Dissolved organic matter (DOM) in pore waters accumulates products and intermediates of carbon cycling in sediments. The application of excitation-emission matrix spectroscopy (EEMs) in the analysis of subseafloor DOM samples is largely unexplored due to the redox-sensitive matrix of anoxic pore water. Therefore, this study aims to investigate the interference caused by the matrix on EEMs and propose a guideline to prepare pore water samples from anoxic marine sediments. The parameters determined by fluorescence spectra include 3D-index derived from EEMs after parallel factor analysis (PARAFAC), fluorescence index (FI) (contribution of terrigenous DOM), biological index (BIX) and humification index (HIX) derived from 2D emission spectra. First, we investigated the impacts of extensively-presented ions as typical electron acceptors, which are utilized by anaerobic microbes and stratified in marine sediments: Fe(II), Fe(III), Mn(II) and sulfide in anoxic pore water resulted in biases of fluorescent signals. We proposed threshold concentrations of these ions when the interference on EEMs occurred. Effective removal of sulfide from sulfide-rich samples could be achieved by flushing with N₂ for 2 min. Second, the tests based on DOM standard were further verified using pristine samples from marine sediments. There was a significant change in the fluorescence spectra of DOM in anoxic sediments from the Rhône Delta. This study demonstrated that the change was caused by oxidation of the matrix rather than the intrinsic alteration of DOM. It was confirmed by extracted DOM via both EEMs analysis and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). Slight oxidation of sulfur-containing compounds (e.g., sulfhydryl) and polyphenol-like compounds occurred. Finally, a sample preparation sequence is proposed for pore water from anoxic sediments. This method enables measurement with small volumes of the sample (e.g., 50 µL in this study) and ensures reliable data without the interference of the redox-sensitive matrix. This study provides access to the rapid analysis of DOM composition in marine sediments and can potentially open a window into examining the carbon cycling of the marine deep biosphere.

Here, we report the results of high-resolution nitrate measurements using an optical nitrate profiler (in situ ultraviolet spectrophotometer, ISUS) along transect across a high-turbidity shelf (East China Sea) and a low-turbidity shelf (Chukchi Sea). The ISUS-measured nitrate concentrations closely reproduced the results measured by conventional bottle methods in low-turbidity waters. However, for high-turbidity waters of the East China Sea (salinity<30), a correction factor of 1.19 was required to match the standard bottle measurements. The high-resolution ISUS data revealed subtle spatial variability (e.g., a subsurface nitrate minimum) that may have been missed if based solely on bottle results. Four main structures of the nitracline on the East China Sea are apparent from the ISUS nitrate profile. High-resolution nitrate data are important for studying nitrate budgets and nutrient dynamics on continental shelves.

The internal energy distribution of waves can be described using ocean-wave spectra. In many ways, obtaining wave spectra on a global scale is critical. Surface waves investigation and monitoring onboard the Chinese-French oceanography satellite is the first space-borne instrument for detecting wave spectra specially, which was launched on October 29, 2018. It can avoid the shortage of synthetic aperture radar detection results while still having some problems, especially with the effects of speckle noise. In this study, a method to suppress the speckle noise is proposed. First, the empirical formula for background speckle noise is established. Second, many spatio-temporal representative fluctuation spectra are classified and averaged. Third, rational transfer function filtering is used to obtain speckle noise close to the along-track direction. Finally, a signal-to-noise ratio threshold is used to suppress the abnormal speckle noise. This method solves the problems existing in previous denoising methods, such as excessive denoising in the along-track direction and the inability of some abnormal noises to be denoised in the two-dimensional directional wave spectra.

Mesopelagic fish, the most important daily vertically migrating community in the oceans, are characterized by high lipid content which may obscure the interpretation of stable isotopes analysis. Demersal fish, which are important consumers in the food web dominated by mesopelagic fish, also have a high lipid content. Here we collected 127 fish samples from the South China Sea and evaluated the effect of lipid contents on δ¹³C of mesopelagic and demersal fish. In lipid-extracted mesopelagic fish, the C/N content ratio (<5.5) shows a clear correlation with Δδ¹³C (the offset of bulk and lipid-extracted δ¹³C values), especially in non-migratory and semi-migratory species; these values were less correlation in demersal fish. Based on our results, we suggest that mesopelagic and demersal fish in different regions of the South China Sea should be studied separately using appropriate correction models and less fit for the traditional model. Moreover, the C/N content ratio should be used cautiously for establishing the lipid normalization model, especially for the fish in migratory mesopelagic fish and demersal fish. Our results also reveal that mesopelagic fish across nearby regions could be analyzed together. The new models described here can be applied in future studies of mesopelagic and demersal fish in the South China Sea.

The sedimentary record of climate change in the Arctic region is useful for understanding global warming. Kongsfjord is located in the subpolar region of the Arctic and is a suitable site for studying climate change. Glacier retreat is occurring in this region due to climate change, leading to an increase in meltwater outflow with a high debris content. In August 2017, we collected a sediment Core Z3 from the central fjord near the Yellow River Station. Then, we used the widely used chronology method of ²¹⁰Pb, ¹³⁷Cs, and other parameters to reflect the climate change record in the sedimentary environment of Kongsfjord. The results showed that after the mid-late 1990s, the mass accumulation rate of this core increased from 0.10 g/(cm²·a) to 0.34 g/(cm²·a), while the flux of ²¹⁰Pb_ex increased from 125 Bq/(m²·a) to 316 Bq/(m²·a). The higher sedimentary inventory of ²¹⁰Pb_ex in Kongsfjord compared to global fallout might have been caused by sediment focusing, boundary scavenging, and riverine input. Similarities between the inventory of ¹³⁷Cs and global fallout indicated that terrestrial particulate matter was the main source of ¹³⁷Cs in fjord sediments. The sedimentation rate increased after 1997, possibly due to the increased influx of glacial meltwater containing debris. In addition, the ¹³⁷Cs activity, percentage of organic carbon (OC), and OC/total nitrogen concentration ratio showed increasing trends toward the top of the core since 1997, corresponding to a decrease in the mass balance of glaciers in the region. The results of δ¹³C, δ¹⁵N and OC/TN concentration ratio showed both terrestrial and marine sources contributed to the organic matter in Core Z3. The relative contribution of terrestrial organic matter which was calculated by a two-endmember model showed an increased trend since mid-1990s. All these data indicate that global climate change has a significant impact on Arctic glaciers.

Mudflats play a vital role in maintaining the dynamic balance between sea and land. To understand the characteristics, sources, and pollution risks of six heavy metals (As, Cd, Cr, Cu, Hg, and Pb) in the coastal mudflats on the Leizhou Peninsula, 257 surface sediment samples were studied using mathematical statistics, correlation analysis, and factor analysis. The results show that the overall concentrations of these heavy metals are low although there are several high abnormal points in the local areas. The strong correlation between these heavy metals indicates that the sources of some of the metals are similar, yet their elemental combinations in different cities (counties) varied. According to the calculated enrichment factor (EF), anthropogenic activity-induced heavy metals were determined in order of decreasing influence: As, Cd, Pb, Cr, Cu, and Hg. The low EF values of Hg indicate that it does not present as a contaminant in the study area, while low values of Cr and Cu from the Lianjiang City suggest that these two metals were also attributed to natural sources. The presence of As, Cd, Cr, Cu, and Pb from the remaining cities (counties) should be influenced by anthropogenic activities. The overall potential ecological risk index indicates that the ecological risks posed by the six analyzed heavy metals to the Leizhou Peninsula mudflats, in order of decreasing risk, are Cd, As, Hg, Pb, Cu, and Cr. It is noteworthy that only Cd in Lianjiang City demonstrated substantial ecological risk. Other examined heavy metals in other cities of the study area showed slight ecological risk.

Pituitary gland, or pituitary for short, is characteristic of all vertebrates. As a “master gland” controlling a multitude of important functions in the body, its evolutionary origin has been an object of investigations of evolutionary biology for two centuries. Previous morphological, ultrastructural and immunohistochemical studies suggested the homology of the Hatschek’s pit of amphioxus and vertebrate pituitary. Developmental genetics study showed that the development of Hatschek’s pit and vertebrate pituitary is both subject to regulation by the common genes such as Pit1, Lhx3 and BMP3b. Our recent studies demonstrated that the Hatschek’s pit is able to secrete growth hormone (GH)-like hormone and thyroid-stimulating hormone (TSH)-like hormone that both play functions similar to vertebrate GH and TSH. We thus think that the emergence of Hatschek’s pit represents one of important events during endocrine network evolution, which laid a foundation for the subsequent formation of a hypothalamic-pituitary system in vertebrates.

Assessments of phytoplankton diversity in Sabah waters, North Borneo, have primarily relied on morphology-based identification, which has inherent biases and can be time-consuming. Next-Generation Sequencing (NGS) technology has been shown to be capable of overcoming several limitations of morphology-based methods. Samples were collected from the Sepanggar Bay over the course of the year 2018 in different monsoon seasons. Morphology-based identification and NGS sequencing of the V8–V9 region of the 18S LSU rDNA were used to investigate the diversity of the phytoplankton community. Microscopy and NGS showed complementary results with more diatom taxa detected by microscopy whereas NGS detected smaller and rarer taxa. The harmful algal genera in the study site comprised of Skeletonema, Margalefidinium, Pyrodinium, Takayama, and Alexandrium as detected by NGS. This study showed that that an integrative approach of both morphological and molecular techniques could provide more comprehensive information about the phytoplankton community as the approach captured quantitative variability as well as the diversity of phytoplankton species.

Some deep-sea microbes may incorporate inorganic carbon to reduce CO₂ emission to upper layer and atmosphere. How the microbial inhabitants can be affected under addition of bicarbonate has not been studied using in situ fixed and lysed samples. In this study, we cultivated 40 L natural bottom water at ~1 000 m depth with a final concentration of 0.1 mmol/L bicarbonate for 40 min and applied multiple in situ nucleic acids collection (MISNAC) apparatus for nucleic acids extraction from the cultivation. Our classification result of the cultivation sample showed a distinct microbial community structure, compared with the samples obtained by Niskin bottle and six working units of MISNAC. Except for notable enrichment of Alteromonas, we detected prevalence of Asprobacter, Ilumatobacter and Saccharimonadales in the cultivation. Deep-sea lineages of Euryarchaeota, SAR406, SAR202 and SAR324 were almost completely absent from the cultivation and Niskin samples. This study revealed the dominant microbes affected by bicarbonate addition and Niskin sampling, which suggested rapid responses of deep-sea microbes to the environmental changes.

Although the adverse impacts of ocean acidification (OA) on marine calcifiers have been investigated extensively, the anti-stress capabilities regulated by increased light availability are unclear. Herein, the interactive effects of three light levels (30 μmol photons/(m²·s), 150 μmol photons/(m²·s), and 240 μmol photons/(m²·s) combined with two pCO₂ concentrations (400 ppmv and 1400 ppmv) on the physiological acclimation of the calcifying macroalga Halimeda opuntia were investigated using a pCO₂-light coupling experiment. The OA negatively influenced algal growth, calcification, photosynthesis, and other physiological performances in H. opuntia. The relative growth rate under elevated pCO₂ conditions significantly declined by 13.14%−41.29%, whereas net calcification rates decreased by nearly three-fold under OA conditions. Notably, increased light availability enhanced stress resistance through the accumulation of soluble organic molecules, especially soluble carbohydrate, soluble protein, and free amino acids, and in combination with metabolic enzyme-driven activities, OA stress was alleviated. The carotenoid content under low light conditions increased markedly, and the rapid light curve of the relative electron transport rate was enhanced significantly by increasing light intensities, indicating that this new organization of the photosynthetic machinery in H. opuntia accommodated light variations and elevated pCO₂ conditions. Thus, the enhanced metabolic performance of the calcifying macroalga H. opuntia mitigated OA-related stress.