Article(id=1308468689506951233, tenantId=1146029695717560320, journalId=1189982191388893191, issueId=1308468301072458736, articleNumber=null, orderNo=null, doi=10.16438/j.0513-4870.2025-0413, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1744560000000, receivedDateStr=2025-04-14, revisedDate=1753286400000, revisedDateStr=2025-07-24, acceptedDate=null, acceptedDateStr=null, onlineDate=1789892845751, onlineDateStr=2026-09-20, pubDate=1765468800000, pubDateStr=2025-12-12, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1789892845751, onlineIssueDateStr=2026-09-20, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1789892845751, creator=13701087609, updateTime=1789892845751, updator=13701087609, issue=Issue{id=1308468301072458736, tenantId=1146029695717560320, journalId=1189982191388893191, year='2025', volume='60', issue='12', pageStart='3545', pageEnd='3798', issueExtLink='null', onlineDate='null', pubDate='1765468800000', pubDateStr='2025-12-12', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=null, createTime=1789892753141, creator='13701087609', updateTime=1789893218933, updator='13701087609', preIssue=null, nextIssue=null, articleTotal=null, ext={EN=IssueExt(id=1308470254842175559, tenantId=1146029695717560320, journalId=1189982191388893191, issueId=1308468301072458736, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1308470254842175560, tenantId=1146029695717560320, journalId=1189982191388893191, issueId=1308468301072458736, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null, downloadFileDto=null}, startPage=3644, endPage=3654, ext={EN=ArticleExt(id=1308468691247587394, articleId=1308468689506951233, tenantId=1146029695717560320, journalId=1189982191388893191, language=EN, title=Investigation of the role of the PPAR
α-medium/long-chain acylcarnitines axis in liver injury and the hepatoprotective effects of herbal medicines, columnId=1308468303916196849, journalTitle=Acta Pharmaceutica Sinica, columnName=Special Reports: Current Pharmacological Research on Nuclear Receptors, runingTitle=null, highlight=null, articleAbstract=
This study focused on the medium- and long-chain acylcarnitines (MCACs/LCACs) metabolic axis regulated by peroxisome proliferator-activated receptor alpha (PPARα), aiming to elucidate its potential role in the hepatoprotective effects of herbal medicines. Initially, literature mining and database analysis were conducted to summarize the current research applications of PPARα agonists in liver diseases and the pathological implications of MCACs/LCACs accumulation across different liver disease models. Furthermore, published studies and animal experiments were integrated to validate the potential mechanism by which herbal medicines and herbal ingredients modulate liver disease via the PPARα-MCACs/LCACs pathway. Experimental results showed that co-administration of triptolide and celastrol (TP_Cel) significantly induced liver injury, accompanied by marked accumulation of MCACs/LCACs. In the TP_Cel model, Spearman analysis revealed moderately to strongly inverse correlations between plasma MCACs/LCACs abundances and the expression of hepatic PPARα-target genes, including Cpt1a, Cpt2, and Acox1, with most correlations reaching statistical significance (P < 0.05). In addition, plasma MCACs/LCACs abundances were significantly elevated in Ppara-/- mice compared with wild-type 129 mice (P < 0.05). Based on these findings, a multi-stage screening strategy was established, resulting in the identification of 68 hepatoprotective herbal medicines (HpHMs) and 29 hepatoprotective herbal ingredients (HpHIs), both targeting PPARα with no documented hepatotoxicity. Finally, molecular docking was employed to preliminarily evaluate the binding capacity of HpHIs to PPARα. These findings provide mechanistic insights and potential resources for the development of herbal medicines and herbal ingredients targeting lipid metabolism disorders in liver diseases. All animal experiments were approved by the Animal Ethics Committee of West China Hospital, Sichuan University (approval No. 20220217001).
, authors=Shi-ya AI
1, Miao-miao TANG
2, Xiao-li GUO
1, Fei LI
1, *, authorsList=Shi-ya AI, Miao-miao TANG, Xiao-li GUO, Fei LI, authorCompany=null, correspAuthors=Fei LI, authorNote=null, correspAuthorsNote=null, copyrightStatement=Copyright ©2025 Acta Pharmaceutica Sinica. All rights reserved., copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1308468698059137103, articleId=1308468689506951233, tenantId=1146029695717560320, journalId=1189982191388893191, language=CN, title=PPAR
α-中长链酰基肉碱轴在肝损伤及中药保肝中的作用研究, columnId=1308468304109134835, journalTitle=药学学报, columnName=专题报道: 核受体药物药理研究进展, runingTitle=null, highlight=null, articleAbstract=
本研究聚焦过氧化物酶体增殖物激活受体α (peroxisome proliferator-activated receptor alpha, PPARα) 调控的中长链酰基肉碱(medium- and long-chain acylcarnitines, MCACs/LCACs) 代谢通路, 旨在探讨其在中药干预肝损伤中的作用机制。本研究通过数据库与文献挖掘, 分析PPARα激动剂在肝病中的应用现状及MCACs/LCACs蓄积在肝病发生发展中的作用。进一步结合文献证据与动物实验, 验证中药及其成分通过PPARα-MCACs/LCACs通路干预肝病的潜在机制。实验结果表明, 雷公藤甲素联合雷公藤红素(TP_Cel) 可诱导肝损伤, 并伴随血浆MCACs/LCACs蓄积(P < 0.05)。在TP_Cel模型中, Spearman相关性分析显示, 血浆MCACs/LCACs水平与肝脏PPARα靶基因(Cpt1a、Cpt2、Acox1) 表达呈中度至高度负相关, 且多数相关性具有统计学意义(P < 0.05)。此外, Ppara-/-小鼠血浆中MCACs/LCACs水平较野生型129小鼠显著升高(P < 0.05)。最后, 构建多阶段筛选流程, 获得68种靶向PPARα、无明确肝毒性记录的保肝中药(hepatoprotective herbal medicines, HpHMs) 及29种保肝成分(hepatoprotective herbal ingredients, HpHIs)。分子对接初步验证了HpHIs与PPARα的结合能力, 为中药靶向脂质代谢紊乱相关肝病的机制研究与候选药物开发提供理论依据和潜在资源。动物实验方案经四川大学华西医院动物实验伦理委员会批准(批准号: 20220217001)。
, authors=艾诗雅
1, 唐苗苗
2, 郭小丽
1, 李飞
1, *, authorsList=艾诗雅, 唐苗苗, 郭小丽, 李飞, authorCompany=null, correspAuthors=李飞, authorNote=
作者贡献:
艾诗雅负责部分数据收集与处理、动物实验、文章手稿撰写; 唐苗苗参与前期文献调研与研究设计, 并协助修改稿件; 郭小丽协助部分数据收集; 李飞负责实验方案指导与技术支持, 统筹研究全过程。
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1四川大学华西医院消化内科, 肝肠疾病与代谢研究室, 四川大学教育部疾病分子网络前沿科学中心, 四川 成都 610041)])]), Author(id=1308499795963118396, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1308499796047004478, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, authorId=1308499795963118396, language=EN, stringName=Miao-miao TANG, firstName=Miao-miao, middleName=null, lastName=TANG, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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2四川大学华西医院罕见病研究院, 四川大学教育部疾病分子网络前沿科学中心, 四川 成都 610041, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=[AuthorCompany(id=1308499795623379763, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, xref=2, ext=[AuthorCompanyExt(id=1308499795635962676, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, companyId=1308499795623379763, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
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2四川大学华西医院罕见病研究院, 四川大学教育部疾病分子网络前沿科学中心, 四川 成都 610041)])]), Author(id=1308499796185416513, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, orderNo=2, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1308499796269302595, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, authorId=1308499796185416513, language=EN, stringName=Xiao-li GUO, firstName=Xiao-li, middleName=null, lastName=GUO, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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1Department of Gastroenterology & Hepatology, Laboratory of Hepatointestinal Disease and Metabolism, Frontiers Science Center for Disease-Related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null), CN=AuthorExt(id=1308499796328022852, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, authorId=1308499796185416513, language=CN, stringName=郭小丽, firstName=null, middleName=null, lastName=null, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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Polygonum multiflorum thunb. ) ethanol extract suppresses pre-adipocytes differentiation in 3T3-L1 cells and adiposity in obese mice [J]. Biomed Pharmacother, 2018, 106: 355-362., articleTitle=null, refAbstract=null), Reference(id=1308499807627477901, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=36, rfOrder=35, authorNames=null, journalName=null, refType=null, unstructuredReference=Yamada K, Shiraishi H, Oki E, et al. Open-label clinical trial of bezafibrate treatment in patients with fatty acid oxidation disorders in Japan [J]. Mol Genet Metab Rep, 2018, 15: 55-63., articleTitle=null, refAbstract=null), Reference(id=1308499807702975374, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=37, rfOrder=36, authorNames=null, journalName=null, refType=null, unstructuredReference=Zhong MY, Yan Y, Yuan HS, et al.
Astragalus mongholicus polysaccharides ameliorate hepatic lipid accumulation and inflammation as well as modulate gut microbiota in NAFLD rats [J]. Food Funct, 2022, 13: 7287-7301., articleTitle=null, refAbstract=null), Reference(id=1308499807765889935, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=38, rfOrder=37, authorNames=null, journalName=null, refType=null, unstructuredReference=Zhu SY, Jiang N, Yang J, et al.
Silybum marianum oil attenuates hepatic steatosis and oxidative stress in high fat diet-fed mice [J]. Biomed Pharmacother, 2018, 100: 191-197., articleTitle=null, refAbstract=null), Reference(id=1308499807837193104, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=39, rfOrder=38, authorNames=null, journalName=null, refType=null, unstructuredReference=Jiang L, Yi R, Chen H, et al. Quercetin alleviates metabolic-associated fatty liver disease by tuning hepatic lipid metabolism, oxidative stress and inflammation [J]. Anim Biotechnol, 2025, 36: 2442351., articleTitle=null, refAbstract=null), Reference(id=1308499807904301969, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=40, rfOrder=39, authorNames=null, journalName=null, refType=null, unstructuredReference=Wei CB, Tao K, Jiang R, et al. Quercetin protects mouse liver against triptolide-induced hepatic injury by restoring Th17/Treg balance through Tim-3 and TLR4-MyD88-NF-
κB pathway [J]. Int Immunopharmacol, 2017, 53: 73-82., articleTitle=null, refAbstract=null), Reference(id=1308499807979799442, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=41, rfOrder=40, authorNames=null, journalName=null, refType=null, unstructuredReference=Wang L. Preventive Effect of Silymarin and Selenium-Enriched
Cordyceps militaris on Triptolide-Induced Acute Hepatotoxicity in Rats (水飞蓟素和富硒蛹虫草对雷公藤甲素致大鼠肝损伤的保护作用研究) [D]. Guangzhou: Guangzhou University of Chinese Medicine, 2017., articleTitle=null, refAbstract=null), Reference(id=1308499808042714003, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, doi=null, pmid=null, pmcid=null, year=null, volume=null, issue=null, pageStart=null, pageEnd=null, url=null, language=null, rfNumber=42, rfOrder=41, authorNames=null, journalName=null, refType=null, unstructuredReference=Jia YY, Bhuiyan MJH, Jun HJ, et al. Ursolic acid is a PPAR-
α agonist that regulates hepatic lipid metabolism [J]. Bioorg Med Chem Lett, 2011, 21: 5876-5880. ., articleTitle=null, refAbstract=null)], funds=null, companyList=[AuthorCompany(id=1308499795522716464, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, xref=1, ext=[AuthorCompanyExt(id=1308499795535299377, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, companyId=1308499795522716464, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
1Department of Gastroenterology & Hepatology, Laboratory of Hepatointestinal Disease and Metabolism, Frontiers Science Center for Disease-Related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China), AuthorCompanyExt(id=1308499795547882290, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, companyId=1308499795522716464, language=CN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
1四川大学华西医院消化内科, 肝肠疾病与代谢研究室, 四川大学教育部疾病分子网络前沿科学中心, 四川 成都 610041)]), AuthorCompany(id=1308499795623379763, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, xref=2, ext=[AuthorCompanyExt(id=1308499795635962676, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, companyId=1308499795623379763, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
2Institute of Rare Diseases, Frontiers Science Center for Disease-Related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China), AuthorCompanyExt(id=1308499795644351285, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, companyId=1308499795623379763, language=CN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
2四川大学华西医院罕见病研究院, 四川大学教育部疾病分子网络前沿科学中心, 四川 成都 610041)])], figs=[ArticleFig(id=1308499799549248344, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=ay1093SyY7wk4m23MzefpQ==, figureFileBig=1e3nbVDia0g3s4cQ29dKOQ==, tableContent=null), ArticleFig(id=1308499799633134425, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Fig.1, caption=
Flow diagram for the screening of hepatoprotective herbal medicines (HpHMs) and hepatoprotective herbal ingredients (HpHIs). PPARα: Peroxisome proliferator-activated receptor alpha; CNKI: China National Knowledge Infrastructure; NMPA: National Medical Products Administration; TCMIP[19]: Integrative Pharmacology-based Research Platform of Traditional Chinese Medicine; TCMSP[20]: Traditional Chinese Medicine Systems Pharmacology; DL: Drug-likeness; OB: Oral bioavailability; HMDB: Human metabolome database; HIT[16]: Herbal Ingredients' Targets Platform; SymMap[18]: Symptom Mapping; HERB[17]: A high-throughput experiment- and reference-guided database of traditional Chinese medicine, figureFileSmall=ay1093SyY7wk4m23MzefpQ==, figureFileBig=1e3nbVDia0g3s4cQ29dKOQ==, tableContent=null), ArticleFig(id=1308499799758963546, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=Aa5n/lMEysh2iP3a8fBYuQ==, figureFileBig=Zd7EtWtukU8xj2kuwONKzg==, tableContent=null), ArticleFig(id=1308499799826072411, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Fig.2, caption=
Therapeutic applications of PPARα agonists in liver diseases. Network depicting associations between PPARα agonists (orange nodes) and liver diseases (green nodes). Node color intensity reflects the number of agonist types linked to each disease, and edge width indicates the number of supporting publications per drug-disease pair. cGVHD: Chronic graft-versus-host disease; GPD1: Glycerol-3-phosphate dehydrogenase 1; GSDIa: Glycogen storage disease type Ⅰa; MASLD: Metabolic dysfunction-associated steatotic liver disease; VLCAD: Very long-chain acyl-coenzyme A dehydrogenase; DILI: Drug induced liver injury, figureFileSmall=Aa5n/lMEysh2iP3a8fBYuQ==, figureFileBig=Zd7EtWtukU8xj2kuwONKzg==, tableContent=null), ArticleFig(id=1308499799893181276, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=czXjnAQoiyKEIKiRwk0qCg==, figureFileBig=qJxJPLlkonhceMl6EnRGMQ==, tableContent=null), ArticleFig(id=1308499799960290141, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Fig.3, caption=
Association between medium- and long-chain acylcarnitines (MCACs/LCACs) and liver diseases. A: Association scores between acylcarnitines and liver diseases calculated from Comparative Toxicogenomics Database (CTD); B: Chord diagram showing liver diseases (top) and pathological phenotypes (bottom) associated with MCACs/LCACs accumulation; arc width represents literature frequency. CACTD: Carnitine-acylcarnitine translocase deficiency; HMGCLD: 3-Hydroxy-3-methylglutaryl-coenzyme A lyase deficiency; LCHAD: Long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency; MCADD: Medium-chain acyl-CoA dehydrogenase deficiency; MADD: Multiple acyl-CoA dehydrogenase deficiency; CPT2: Carnitine palmitoyltransferase 2; MTPD: Mitochondrial trifunctional protein deficiency; ALDH1L2: Aldehyde dehydrogenase 1 family member L2, figureFileSmall=czXjnAQoiyKEIKiRwk0qCg==, figureFileBig=qJxJPLlkonhceMl6EnRGMQ==, tableContent=null), ArticleFig(id=1308499800031593310, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=ZckQR0KjggETMtzBkY+aMA==, figureFileBig=cDbk/yUCm0LBe45UuFMuOQ==, tableContent=null), ArticleFig(id=1308499800107090783, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Fig.4, caption=
PPARα signaling disruption leads to MCACs/LCACs accumulation in TP_Cel models (A-E) and Ppara-/- models (F). A: Plasma ALT, AST, and TBA were significantly elevated, indicating liver injury; B: Representative hematoxylin and eosin (HE) stained liver sections. CON (left): Normal architecture. TP_Cel (right): Hepatocyte disarrangement, cytoplasmic loosening, vacuolar degeneration (*), erythrocyte extravasation (arrows). Scale bar: 100 μm; C: Hepatic mRNA expression of PPARα signaling genes (Ppara, Cpt1a, Cpt2, Acox1, Cyp4a10) significantly downregulated; D: Plasma MCACs/LCACs abundances were significantly elevated in TP_Cel group compared to CON group; E: Spearman correlation heatmap showed negative correlations between plasma MCACs/LCACs abundances and hepatic PPARα-target gene expression, and positive correlations with liver injury markers; F: Plasma MCACs/LCACs abundances were significantly elevated in Ppara-/- group compared to WT-129 group. TP_Cel: Triptolide and celastrol; ALT: Alanine aminotransferase; AST: Aspartate transaminase; TBA: Total bile acid. n = 4, $ \stackrel{-}{x} $ ± s. *P < 0.05, **P < 0.01, ***P < 0.001 vs CON group or WT-129 group, figureFileSmall=ZckQR0KjggETMtzBkY+aMA==, figureFileBig=cDbk/yUCm0LBe45UuFMuOQ==, tableContent=null), ArticleFig(id=1308499800186782560, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=VlAAW6W9wL2R+/MuWz1fUg==, figureFileBig=b8+Hgxb23HPBen/zOxUQ5g==, tableContent=null), ArticleFig(id=1308499800270668641, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Fig.5, caption=
Screening of HpHMs and HpIMs. A: Network diagram of associations among hepatoprotective formulas (diamond nodes), therapeutic functions, and PPARα-targeting herbal medicines (circular nodes). Hierarchical layers: outer (PPARα-targeting herbal medicines), middle (candidate HpHMs), inner (HpHMs); B: Frequency distribution of top 15 HpHMs across NMPA-approved hepatoprotective formulas; C: Bibliometric count of publications for the top 15 HpHMs; D: Bibliometric count of publications for the top 15 HpHIs; E: Network diagram of associations among HpIMs (green nodes) and HpHMs (blue nodes). Node size of HpHIs indicates the number of associated HpHMs, figureFileSmall=VlAAW6W9wL2R+/MuWz1fUg==, figureFileBig=b8+Hgxb23HPBen/zOxUQ5g==, tableContent=null), ArticleFig(id=1308499800354554722, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=PS0ARfwK1X8SI8mrm+MXSQ==, figureFileBig=eg9+WuiNTN69R1oe/agVQw==, tableContent=null), ArticleFig(id=1308499800425857891, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Fig.6, caption=
Molecular docking conformations (surface and 2D interaction diagrams) of the top five HpHIs and PPARα agonist pemafibrate with PPARα protein (PBD: 6KAZ), figureFileSmall=PS0ARfwK1X8SI8mrm+MXSQ==, figureFileBig=eg9+WuiNTN69R1oe/agVQw==, tableContent=null), ArticleFig(id=1308499800492966756, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=null, figureFileBig=null, tableContent=
| Gene name | Forward primer (5'-3') | Reverse primer (5'-3') |
| Gapdh | TTGTATGTGCAACAATCTCCAC | CGTCCCGTAGACAAAATGTGT |
| Ppara | CCCAAGGGAGGAATAGCTTCT | CTCTGCGATGCGGTTCCAA |
| Cpt1a | TGGCATCATCACTGGTGTGTT | CTCTAGGGTCCGATTGATCTTTG |
| Cpt2 | CAGCACAGCATCGTACCCA | TCCCAATGCCGTTCTCAAAAT |
| Acox1 | CCGCCACCTTCAATCCAGAG | CAAGTTCTCGATTTCTCGACGG |
| Cyp4a10 | CCAGGAACTGCATTGGGAAA | GACCCTGGTAGGATCTGGCA |
), ArticleFig(id=1308499800576852837, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Tab.1, caption=
Primer sequences used for qPCR analysis
, figureFileSmall=null, figureFileBig=null, tableContent=
| Gene name | Forward primer (5'-3') | Reverse primer (5'-3') |
| Gapdh | TTGTATGTGCAACAATCTCCAC | CGTCCCGTAGACAAAATGTGT |
| Ppara | CCCAAGGGAGGAATAGCTTCT | CTCTGCGATGCGGTTCCAA |
| Cpt1a | TGGCATCATCACTGGTGTGTT | CTCTAGGGTCCGATTGATCTTTG |
| Cpt2 | CAGCACAGCATCGTACCCA | TCCCAATGCCGTTCTCAAAAT |
| Acox1 | CCGCCACCTTCAATCCAGAG | CAAGTTCTCGATTTCTCGACGG |
| Cyp4a10 | CCAGGAACTGCATTGGGAAA | GACCCTGGTAGGATCTGGCA |
), ArticleFig(id=1308499800652350310, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=null, figureFileBig=null, tableContent=
| Herbal medicine/ingredient | PPARα-MCACs/LCACs axis alteration | Hepatic impact |
| Paeoniae radix rubra[24] | PPARα↑, MCACs/LCACs↓ | Protect cholestatic model |
| Triptolide[25] | PPARα↓, CPT1/2↓, MCACs/LCACs↑ | Damage |
| Nutmeg[26] | PPARα↑, MCACs/LCACs↓ | Protect DILI |
| Ginsenoside Rg1[27] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Wuzhi tablet[28] | PPARα↑, CPT1↑, MCACs/LCACs↓ | Protect DILI |
| Silybin[29] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Swertia cincta[30] | PPARα↑, CPT2↑ | Protect cholestatic model |
| Dendrobine[31] | PPARα↑, CPT2↑ | Protect MASLD |
| Tangerine peel derived exosome like nanovesicles[32] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Monoammonium glycyrrhizinate[33] | PPARα↑, CPT1/2↑ | Protect hepatocellular steatosis |
| Conophylline[34] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Heshouwu[35] | PPARα↑, CPT1/2↑ | Protect MASLD |
), ArticleFig(id=1308499800727847783, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Tab.2, caption=
Herbal medicines and herbal ingredients modulating CPT1/2 and MCACs/LCACs via PPARα to improve liver disease
, figureFileSmall=null, figureFileBig=null, tableContent=
| Herbal medicine/ingredient | PPARα-MCACs/LCACs axis alteration | Hepatic impact |
| Paeoniae radix rubra[24] | PPARα↑, MCACs/LCACs↓ | Protect cholestatic model |
| Triptolide[25] | PPARα↓, CPT1/2↓, MCACs/LCACs↑ | Damage |
| Nutmeg[26] | PPARα↑, MCACs/LCACs↓ | Protect DILI |
| Ginsenoside Rg1[27] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Wuzhi tablet[28] | PPARα↑, CPT1↑, MCACs/LCACs↓ | Protect DILI |
| Silybin[29] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Swertia cincta[30] | PPARα↑, CPT2↑ | Protect cholestatic model |
| Dendrobine[31] | PPARα↑, CPT2↑ | Protect MASLD |
| Tangerine peel derived exosome like nanovesicles[32] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Monoammonium glycyrrhizinate[33] | PPARα↑, CPT1/2↑ | Protect hepatocellular steatosis |
| Conophylline[34] | PPARα↑, CPT1/2↑ | Protect MASLD |
| Heshouwu[35] | PPARα↑, CPT1/2↑ | Protect MASLD |
), ArticleFig(id=1308499800799150952, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=EN, label=null, caption=null, figureFileSmall=null, figureFileBig=null, tableContent=
| HpHIs | Affinity/kJ·mol-1 | Interaction | Chemical class (NP Classifier) |
| Pemafibrate | -40.815 | H-bond, vdW, hydrophobic, aromatic stacking | / |
| Berberine | -38.012 | H-bond, vdW, hydrophobic, aromatic stacking | Tyrosine alkaloids |
| Auraptene | -36.451 | vdW, hydrophobic, aromatic stacking | Coumarins |
| Sesamin | -36.028 | H-bond, vdW, hydrophobic, aromatic stacking | Lignans |
| γ-Tocopherol | -35.572 | H-bond, vdW, hydrophobic | Meroterpenoids |
| Quercetin | -35.192 | vdW, H-bond, hydrophobic | Flavonoids |
| Naringenin | -34.439 | vdW, hydrophobic | Flavonoids |
| Wogonin | -34.158 | vdW, hydrophobic | Flavonoids |
| Apigenin | -34.054 | H-bond, vdW, hydrophobic | Flavonoids |
| Nobiletin | -33.648 | H-bond, vdW, hydrophobic | Flavonoids |
| Nuciferine | -33.439 | H-bond, vdW, hydrophobic | Tyrosine alkaloids |
| Cyanidin | -33.254 | H-bond, vdW, hydrophobic | Flavonoids |
| Eupatilin | -32.924 | H-bond, vdW, hydrophobic | Flavonoids |
| Genistein | -32.037 | H-bond, vdW, hydrophobic | Isoflavonoids |
| Daidzein | -31.974 | H-bond, vdW, hydrophobic | Isoflavonoids |
| Ergosterol | -31.824 | vdW, hydrophobic | Steroids |
| Silibinin | -29.974 | H-bond, vdW, hydrophobic, aromatic stacking | Lignans, flavonoids |
| β-Ecdysone | -28.221 | H-bond, vdW, hydrophobic | Steroids |
| Hesperidin | -28.070 | H-bond, vdW, hydrophobic | Flavonoids |
| Farnesol | -27.573 | H-bond, vdW, hydrophobic | Sesquiterpenoids, monoterpenoids |
| Abscisic acid | -26.259 | H-bond, vdW, hydrophobic | Apocarotenoids |
| Icariin | -26.204 | H-bond, vdW, hydrophobic | Flavonoids |
| Caffeic acid | -25.614 | H-bond, vdW, hydrophobic | Phenylpropanoids |
| Cinnamic acid | -24.246 | H-bond, vdW, hydrophobic | Phenylpropanoids |
| Loganic acid | -23.782 | H-bond, vdW, hydrophobic | Monoterpenoids |
| Gallic acid | -23.326 | H-bond, vdW, hydrophobic, aromatic stacking | Phenolic acids |
| Caryophyllene | -20.188 | vdW, hydrophobic | Sesquiterpenoids |
| Betaine | -14.439 | H-bond, vdW, electrostatic | Small peptides |
| Gomisin a | -13.531 | H-bond, vdW, hydrophobic | Lignans |
| Ursolic acid | / | / | Triterpenoids |
), ArticleFig(id=1308499800883037033, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1308468689506951233, language=CN, label=Tab.3, caption=
Summary of molecular docking results for HpHIs targeting PPARα (PBD: 6KAZ). H-bond: Hydrogen bond; vdW: van der Waals
, figureFileSmall=null, figureFileBig=null, tableContent=
| HpHIs | Affinity/kJ·mol-1 | Interaction | Chemical class (NP Classifier) |
| Pemafibrate | -40.815 | H-bond, vdW, hydrophobic, aromatic stacking | / |
| Berberine | -38.012 | H-bond, vdW, hydrophobic, aromatic stacking | Tyrosine alkaloids |
| Auraptene | -36.451 | vdW, hydrophobic, aromatic stacking | Coumarins |
| Sesamin | -36.028 | H-bond, vdW, hydrophobic, aromatic stacking | Lignans |
| γ-Tocopherol | -35.572 | H-bond, vdW, hydrophobic | Meroterpenoids |
| Quercetin | -35.192 | vdW, H-bond, hydrophobic | Flavonoids |
| Naringenin | -34.439 | vdW, hydrophobic | Flavonoids |
| Wogonin | -34.158 | vdW, hydrophobic | Flavonoids |
| Apigenin | -34.054 | H-bond, vdW, hydrophobic | Flavonoids |
| Nobiletin | -33.648 | H-bond, vdW, hydrophobic | Flavonoids |
| Nuciferine | -33.439 | H-bond, vdW, hydrophobic | Tyrosine alkaloids |
| Cyanidin | -33.254 | H-bond, vdW, hydrophobic | Flavonoids |
| Eupatilin | -32.924 | H-bond, vdW, hydrophobic | Flavonoids |
| Genistein | -32.037 | H-bond, vdW, hydrophobic | Isoflavonoids |
| Daidzein | -31.974 | H-bond, vdW, hydrophobic | Isoflavonoids |
| Ergosterol | -31.824 | vdW, hydrophobic | Steroids |
| Silibinin | -29.974 | H-bond, vdW, hydrophobic, aromatic stacking | Lignans, flavonoids |
| β-Ecdysone | -28.221 | H-bond, vdW, hydrophobic | Steroids |
| Hesperidin | -28.070 | H-bond, vdW, hydrophobic | Flavonoids |
| Farnesol | -27.573 | H-bond, vdW, hydrophobic | Sesquiterpenoids, monoterpenoids |
| Abscisic acid | -26.259 | H-bond, vdW, hydrophobic | Apocarotenoids |
| Icariin | -26.204 | H-bond, vdW, hydrophobic | Flavonoids |
| Caffeic acid | -25.614 | H-bond, vdW, hydrophobic | Phenylpropanoids |
| Cinnamic acid | -24.246 | H-bond, vdW, hydrophobic | Phenylpropanoids |
| Loganic acid | -23.782 | H-bond, vdW, hydrophobic | Monoterpenoids |
| Gallic acid | -23.326 | H-bond, vdW, hydrophobic, aromatic stacking | Phenolic acids |
| Caryophyllene | -20.188 | vdW, hydrophobic | Sesquiterpenoids |
| Betaine | -14.439 | H-bond, vdW, electrostatic | Small peptides |
| Gomisin a | -13.531 | H-bond, vdW, hydrophobic | Lignans |
| Ursolic acid | / | / | Triterpenoids |
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