Article(id=1209792676183011523, tenantId=1146029695717560320, journalId=1189982191388893191, issueId=1209792664371851916, articleNumber=null, orderNo=null, doi=10.16438/j.0513-4870.2021-1389, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=research-article, receivedDate=1632240000000, receivedDateStr=2021-09-22, revisedDate=1634054400000, revisedDateStr=2021-10-13, acceptedDate=null, acceptedDateStr=null, onlineDate=1766366650862, onlineDateStr=2025-12-22, pubDate=1649692800000, pubDateStr=2022-04-12, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1766366650862, onlineIssueDateStr=2025-12-22, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1766366650862, creator=13701087609, updateTime=1766366650862, updator=13701087609, issue=Issue{id=1209792664371851916, tenantId=1146029695717560320, journalId=1189982191388893191, year='2022', volume='57', issue='4', pageStart='845', pageEnd='1218', issueExtLink='null', onlineDate='null', pubDate='null', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=null, createTime=1766366648046, creator=13701087609, updateTime=1766370722811, updator=13701087609, preIssue=null, nextIssue=null, ext={EN=IssueExt(id=1209809755216941958, tenantId=1146029695717560320, journalId=1189982191388893191, issueId=1209792664371851916, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1209809755216941959, tenantId=1146029695717560320, journalId=1189982191388893191, issueId=1209792664371851916, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null}, startPage=1073, endPage=1079, ext={EN=ArticleExt(id=1209792676677939438, articleId=1209792676183011523, tenantId=1146029695717560320, journalId=1189982191388893191, language=EN, title=Design, synthesis and antitumor activity of isatin derivatives as palmitoyl transferase inhibitors, columnId=1190335348761793317, journalTitle=Acta Pharmaceutica Sinica, columnName=Original Articles, runingTitle=null, highlight=null, articleAbstract=

Based on the chemical structure of known compound, 12 isatin derivatives palmitoyl transferase inhibitors are designed and synthesized using bioisosterism and molecular docking, while their anti-tumor activities in vitro are determined. The structures of the target compounds are confirmed by 1H NMR, 13C NMR and HR-MS. In vitro anti-tumor assay illustrates that compound 5b exhibits similar anti-tumor activity to the control (IC50 = 8.4 μmol·L-1), with IC50 value of 12.0 μmol·L-1 against MCF-7 in which palmitoyl transferase is highly expressed. Compound 4b shows higher inhibitory activity against HeLa (IC50 = 8.1 μmol·L-1) than cisplatin (IC50 = 40.1 μmol·L-1). The molecular docking demonstrates that all compounds could completely enter the site of 3'-adenosine monophosphate-5'-diphosphate (PAP). Taken together, isatin derivatives represent promising compounds for the discovery of novel anti-tumor agents.

, correspAuthors=Ya-li SONG, authorNote=null, correspAuthorsNote=null, copyrightStatement=Copyright ©2022 Acta Pharmaceutica Sinica. All rights reserved., copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=null, pdfFileSize=null, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, authorCompany=null, fund=null, authors=null, authorsList=Wei YU, Jin-jiao DONG, Xin-yue ZHU, Kan YANG, Zhen-ming LIU, Xiao-qiang QIAO, Ya-li SONG), CN=ArticleExt(id=1209792680368927262, articleId=1209792676183011523, tenantId=1146029695717560320, journalId=1189982191388893191, language=CN, title=靛红衍生物类棕榈酰基转移酶抑制剂的设计、合成及抗肿瘤活性研究, columnId=1190335348896011050, journalTitle=药学学报, columnName=研究论文, runingTitle=null, highlight=null, articleAbstract=

基于已知化合物的化学结构, 利用生物电子等排体原理, 结合分子对接技术设计合成了12个靛红衍生物类棕榈酰基转移酶抑制剂, 测定了其体外抗肿瘤活性并进行了分子对接研究。目标化合物结构均已由核磁共振氢谱(1H NMR)、核磁共振碳谱(13C NMR) 和高分辨质谱(HR-MS) 进行了确证。体外抗肿瘤实验结果表明, 化合物5b对棕榈酰基转移酶高表达的MCF-7细胞表现出的抑制活性与对照药(IC50 = 8.4 μmol·L-1) 相当, IC50为12.0 μmol·L-1。化合物4b对HeLa细胞(IC50 = 8.1 μmol·L-1) 的抑制活性优于顺铂(IC50 = 40.1 μmol·L-1)。同时分子对接结果表明, 化合物均能完全进入3'-磷酸腺苷-5'-二磷酸(PAP) 活性口袋内, 且5b打分值最好, 具有进一步的研究价值。

, correspAuthors=宋亚丽, authorNote=null, correspAuthorsNote=
*宋亚丽, E-mail:
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Key Laboratory of Medicinal Chemistry and Molecular Diagnosis of Ministry of Education, Hebei University, Baoding 071002, China), AuthorCompanyExt(id=1209847820065050866, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, companyId=1209847820048273649, language=CN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=3.河北大学, 药物化学与分子诊断教育部重点实验室, 河北 保定 071002)])], figs=[ArticleFig(id=1209847824880112036, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=Ma//VYgBHSxrOVRFzcRcCA==, figureFileBig=+Q1R2GqKOtKxYcH6Zywq1w==, tableContent=null), ArticleFig(id=1209847825018524075, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 1, caption= Reported some anticancer isatin derivatives , figureFileSmall=Ma//VYgBHSxrOVRFzcRcCA==, figureFileBig=+Q1R2GqKOtKxYcH6Zywq1w==, tableContent=null), ArticleFig(id=1209847825135964592, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=yMU5bXC5cfSf3CiXfakgZg==, figureFileBig=cNLS8SryoECz9H1bSCVolA==, tableContent=null), ArticleFig(id=1209847825219850678, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 2, caption= Representative palmitoyl transferase inhibitors , figureFileSmall=yMU5bXC5cfSf3CiXfakgZg==, figureFileBig=cNLS8SryoECz9H1bSCVolA==, tableContent=null), ArticleFig(id=1209847825295348153, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=y3/skSJfH86hISXWk0ZiSg==, figureFileBig=f1uhQf8zq5HCg/XUc4Q46g==, tableContent=null), ArticleFig(id=1209847826515890621, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 3, caption= Design of palmitoyl transferase inhibitors , figureFileSmall=y3/skSJfH86hISXWk0ZiSg==, figureFileBig=f1uhQf8zq5HCg/XUc4Q46g==, tableContent=null), ArticleFig(id=1209847826629136832, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=5e/qBNUU+wJ116f0QE12ug==, figureFileBig=Y/FsEv8UmOMwf//YjRZn7Q==, tableContent=null), ArticleFig(id=1209847826721411522, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 4, caption= Synthetic route of target compounds of <strong>4a</strong>-<strong>4h</strong> and <strong>5a</strong>-<strong>5d</strong> , figureFileSmall=5e/qBNUU+wJ116f0QE12ug==, figureFileBig=Y/FsEv8UmOMwf//YjRZn7Q==, tableContent=null), ArticleFig(id=1209847826784326086, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=C2RBMviDQvg3sK2dV0WRzQ==, figureFileBig=qsb1UhalBnoXDX9ZPBtw9g==, tableContent=null), ArticleFig(id=1209847826851434953, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 5, caption= AO/EB staining experiment of compound <strong>5b</strong> , figureFileSmall=C2RBMviDQvg3sK2dV0WRzQ==, figureFileBig=qsb1UhalBnoXDX9ZPBtw9g==, tableContent=null), ArticleFig(id=1209847826939515339, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=DvPt71haVgZq6Z/lvADSig==, figureFileBig=ENgo0kUtF6su7KWupO3jjA==, tableContent=null), ArticleFig(id=1209847827031790030, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 6, caption= Inhibition of migration of MCF-7 with control, compound <strong>5b</strong> and cisplatin , figureFileSmall=DvPt71haVgZq6Z/lvADSig==, figureFileBig=ENgo0kUtF6su7KWupO3jjA==, tableContent=null), ArticleFig(id=1209847827107287506, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=CWNUlbYS4IHtnSC1NYvy1Q==, figureFileBig=mHn8zkulGSoX1AOSoADoHQ==, tableContent=null), ArticleFig(id=1209847827212145108, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Figure 7, caption= The results of molecular docking (PDB ID: 6BML). A: PAP; B: <strong>4b</strong>; C: <strong>5b</strong> , figureFileSmall=CWNUlbYS4IHtnSC1NYvy1Q==, figureFileBig=mHn8zkulGSoX1AOSoADoHQ==, tableContent=null), ArticleFig(id=1209847827300225494, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=null, figureFileBig=null, tableContent=
Compd.Yield /%Propertymp/℃1H NMR (600 MHz, DMSO-d6)13C NMR (151 MHz, DMSO-d6)ESI+-MS (m/z) [M+H]+
4a83Yellow powder212.0-213.112.41 (s, 1H), 9.08 (s, 1H), 8.73 (s, 1H), 7.71 (d, J = 7.3 Hz, 1H), 7.43 (t, J = 7.3 Hz, 1H), 7.21 (d, J = 7.9 Hz, 1H), 7.15 (t, J = 7.5 Hz, 1H), 3.87 (t, J = 6.4 Hz, 2H), 3.51 (t, J = 4.5 Hz, 4H), 2.57 (t, J = 6.4 Hz, 2H), 2.44 (t, J = 4.5 Hz, 4H).178.8, 160.8, 142.9, 131.1, 131.0, 122.7, 120.7, 119.3, 110.1, 66.1, 54.9, 53.1, 36.6.334.133 2
4b70Yellow powder232.3-233.512.36 (s, 1H), 9.08 (s, 1H), 8.73 (s, 1H), 7.72 (d, J = 7.4 Hz, 1H), 7.44 (t, J = 7.6 Hz, 1H), 7.25 (d, J = 7.7 Hz, 1H), 7.16 (t, J = 7.5 Hz, 1H), 3.98 (t, J = 7.3 Hz, 2H), 3.19 (t, J = 7.4 Hz, 2H), 2.88 (m, 2H), 2.73 (m, 1H), 1.62 (m, 2H), 1.52 (m, 2H), 1.34 (m, 2H), 1.07 (d, J = 7.1 Hz, 3H).178.7, 160.9, 142.0, 131.5, 131.1, 123.1, 120.8, 119.7, 110.0, 59.2, 50.9, 48.1, 33.6, 30.7, 22.3, 21.5, 17.1.346.169 6
4c80Yellow powder230.0-231.512.41 (s, 1H), 9.07 (s, 1H), 8.73 (s, 1H), 7.72 (d, J = 7.4 Hz, 1H), 7.44 (t, J = 7.6 Hz, 1H), 7.22 (d, J = 7.9 Hz, 1H), 7.16 (t, J = 7.5 Hz, 1H), 3.82 (t, J = 6.6 Hz, 2H), 3.62 (t, J = 7.8 Hz, 4H), 2.80 (t, J = 7.1 Hz, 2H), 2.72 (t, J = 7.7 Hz, 4H), 1.91 (m, 2H).178.7, 160.9, 142.8, 131.2, 131.1, 122.8, 120.7, 119.4, 109.9, 64.7, 54.5, 52.2, 37.1, 22.6.348.148 9
4d87Yellow powder217.3-218.912.37 (s, 1H), 9.06 (s, 1H), 8.73 (s, 1H), 7.73 (d, J = 7.5 Hz, 1H), 7.45 (t, J = 7.7 Hz, 1H), 7.29 (d, J = 7.8 Hz, 1H), 7.17 (t, J = 7.5 Hz, 1H), 3.85 (t, J = 6.8 Hz, 2H), 3.40 (m, 1H), 3.18 (m, 2H), 2.97 (t, J = 6.3 Hz, 2H), 2.03 (t, J = 7.5 Hz, 2H), 1.82 (m, 2H), 1.67 (m, 2H), 1.54 (m, 2H), 1.25 (d, J = 7.9 Hz, 3H).178.7, 160.9, 142.6, 131.2, 131.1, 122.9, 120.8, 119.5, 109.9, 58.3, 51.1, 49.5, 36.7, 31.1, 30.7, 22.5, 21.0, 17.3.360.185 8
4e76Yellow powder231.2-232.512.38 (s, 1H), 9.08 (s, 1H), 8.74 (s, 1H), 7.73 (d, J = 7.5 Hz, 1H), 7.46 (t, J = 7.7 Hz, 1H), 7.26 (d, J = 7.9 Hz, 1H), 7.17 (t, J = 7.5 Hz, 1H), 3.84 (t, J = 6.8 Hz, 2H), 3.09 (t, J = 7.1 Hz, 2H), 3.04 (m, 4H), 1.98 (m, 2H), 1.14 (t, J = 7.3 Hz, 6H).178.7, 160.8, 142.8, 131.2, 131.1, 122.8, 120.7, 119.4, 109.9, 49.1, 46.2, 37.1, 23.2, 9.9.334.170 2
4f87Yellow powder225.8-226.512.42 (s, 1H), 9.05 (s, 1H), 8.70 (s, 1H), 7.71 (d, J = 7.5 Hz, 1H), 7.44 (t, J = 7.7 Hz, 1H), 7.21 (d, J = 7.9 Hz, 1H), 7.15 (t, J = 7.5 Hz, 1H), 3.77 (t, J = 6.8 Hz, 2H), 3.66 (t, J = 7.4 Hz, 4H), 2.74 (t, J = 7.2 Hz, 4H), 2.69 (t, J = 6.9 Hz, 2H), 1.66 (m, 2H), 1.57 (m, 2H).178.7, 160.8, 142.7, 131.2, 131.1, 122.8, 120.7, 119.4, 110.0, 64.7, 56.6, 56.0, 52.2, 24.4, 21.7.362.165 1
4g84Yellow powder217.3-218.912.42 (s, 1H), 9.03 (s, 1H), 8.69 (s, 1H), 7.70 (d, J = 7.5 Hz, 1H), 7.42 (t, J = 7.7 Hz, 1H), 7.20 (d, J = 7.9 Hz, 1H), 7.14 (t, J = 7.5 Hz, 1H), 3.76 (t, J = 6.9 Hz, 2H), 3.43 (t, J = 7.0 Hz, 2H), 3.02 (m, 1H), 2.87 (m, 2H), 1.67 (t, J = 7.6 Hz, 2H), 1.62 (m, 2H), 1.57 (m, 2H), 1.53 (m, 2H), 1.35 (m, 2H), 1.11 (d, J = 6.3 Hz, 3H).178.6, 160.7, 142.7, 131.2, 131.1, 122.8, 120.7, 119.3, 110.0, 56.4, 56.0, 51.6, 50.4, 48.5, 31.8, 24.5, 23.71, 21.4, 18.5.374.201 5
4h64Yellow powder297.5-298.512.42 (s, 1H), 9.08 (s, 1H), 8.73 (s, 1H), 7.71 (d, J = 7.1 Hz, 1H), 7.44 (t, J = 7.8, 1.0 Hz, 1H), 7.21 (d, J = 7.9 Hz, 1H), 7.16 (t, J = 7.5 Hz, 1H), 3.77 (t, J = 6.9 Hz, 2H), 2.73 (t, J = 7.9 Hz, 2H), 2.64 (m, 4H), 1.66 (m, 2H), 1.50 (m, 2H), 1.01 (t, J = 6.8 Hz, 6H).178.7, 160.7, 142.7, 131.2, 131.1, 122.8, 120.7, 119.4, 110.0, 51.1, 48.5, 46.33, 38.8, 24.5, 10.1.347.178 0
5a77Yellow powder216.1-217.912.43 (s, 1H), 7.54 (d, J = 7.4 Hz, 1H), 7.42 (t, J = 7.7 Hz, 1H), 7.16 (d, J = 7.5 Hz, 1H), 7.03 (t, J = 7.7 Hz, 1H), 3.94 (s, 2H, S-CH2), 3.82 (t, J = 6.4 Hz, 2H), 3.51 (t, J = 4.6 Hz, 4H), 2.55 (t, J = 6.5 Hz, 2H), 2.45 (t, J = 4.8 Hz, 4H).184.3, 175.1, 157.2, 143.7, 143.5, 132.0, 122.3, 120.8, 120.1, 109.4, 66.0, 54.9, 53.1, 36.4, 33.4.372.112 5
5b70Yellow powder265.0-266.311.52 (s, 1H), 7.55 (d, J = 7.2 Hz, 1H), 7.44 (t, J = 7.5 Hz, 1H), 7.25 (d, J = 6.9 Hz, 1H), 7.10 (t, J = 6.7 Hz, 1H), 4.02 (s, 2H, S-CH2), 3.96 (t, J = 7.2 Hz, 2H), 3.26 (t, J = 6.0 Hz, 2H), 3.12 (m, 1H), 2.93 (t, J = 7.0 Hz, 2H), 1.76 (m, 2H), 1.46 (m, 2H), 1.17 (d, J = 6.3 Hz, 3H).186.2, 178.7, 160.9, 142.5, 131.1, 131.0, 122.9, 120.7, 119.5, 110.1, 56.3, 50.6, 50.4, 48.9, 35.1, 31.8, 24.3, 22.2, 17.2.384.148 9
5c76Yellow powder210.5-211.412.44 (s, 1H), 7.54 (d, J = 7.3 Hz, 1H), 7.42 (t, J = 7.7 Hz, 1H), 7.11 (d, J = 7.9 Hz, 1H), 7.07 (t, J = 7.5 Hz, 1H), 3.93 (s, 2H, S-CH2), 3.74 (t, J = 6.7 Hz, 2H), 3.49 (t, J = 4.7 Hz, 4H), 2.34 (t, J = 7.3 Hz, 2H), 2.30 (t, J = 4.9 Hz, 4H), 1.76 (m, 2H).186.8, 178.7, 160.9, 142.8, 131.2, 131.1, 122.8, 120.7, 119.4, 109.9, 64.7, 54.5, 52.2, 37.1, 27.4, 22.6.386.128 7
5d72Yellow powder200.2-203.012.42 (s, 1H), 7.53 (d, J = 7.3 Hz, 1H), 7.40 (t, J = 7.5 Hz, 1H), 7.11 (d, J = 7.4 Hz, 1H), 7.06 (t, J = 7.6 Hz, 1H), 3.91 (s, 2H, S-CH2), 3.70 (t, J = 7.1 Hz, 2H), 3.55 (t, J = 4.1 Hz, 4H), 2.37 (t, J = 4.3 Hz, 4H), 2.33 (t, J = 7.3 Hz, 2H), 1.61 (m, 2H), 1.46 (m, 2H).187.5, 178.7, 160.7, 142.7, 131.2, 131.1, 122.8, 120.7, 119.4, 110.0, 64.7, 56.5, 52.2, 38.8, 24.4, 21.7, 18.5.402.160 0
), ArticleFig(id=1209847827388305880, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Table 1, caption=

Physical properties and spectra data of the target compounds 4a-4h and 5a-5d

, figureFileSmall=null, figureFileBig=null, tableContent=
Compd.Yield /%Propertymp/℃1H NMR (600 MHz, DMSO-d6)13C NMR (151 MHz, DMSO-d6)ESI+-MS (m/z) [M+H]+
4a83Yellow powder212.0-213.112.41 (s, 1H), 9.08 (s, 1H), 8.73 (s, 1H), 7.71 (d, J = 7.3 Hz, 1H), 7.43 (t, J = 7.3 Hz, 1H), 7.21 (d, J = 7.9 Hz, 1H), 7.15 (t, J = 7.5 Hz, 1H), 3.87 (t, J = 6.4 Hz, 2H), 3.51 (t, J = 4.5 Hz, 4H), 2.57 (t, J = 6.4 Hz, 2H), 2.44 (t, J = 4.5 Hz, 4H).178.8, 160.8, 142.9, 131.1, 131.0, 122.7, 120.7, 119.3, 110.1, 66.1, 54.9, 53.1, 36.6.334.133 2
4b70Yellow powder232.3-233.512.36 (s, 1H), 9.08 (s, 1H), 8.73 (s, 1H), 7.72 (d, J = 7.4 Hz, 1H), 7.44 (t, J = 7.6 Hz, 1H), 7.25 (d, J = 7.7 Hz, 1H), 7.16 (t, J = 7.5 Hz, 1H), 3.98 (t, J = 7.3 Hz, 2H), 3.19 (t, J = 7.4 Hz, 2H), 2.88 (m, 2H), 2.73 (m, 1H), 1.62 (m, 2H), 1.52 (m, 2H), 1.34 (m, 2H), 1.07 (d, J = 7.1 Hz, 3H).178.7, 160.9, 142.0, 131.5, 131.1, 123.1, 120.8, 119.7, 110.0, 59.2, 50.9, 48.1, 33.6, 30.7, 22.3, 21.5, 17.1.346.169 6
4c80Yellow powder230.0-231.512.41 (s, 1H), 9.07 (s, 1H), 8.73 (s, 1H), 7.72 (d, J = 7.4 Hz, 1H), 7.44 (t, J = 7.6 Hz, 1H), 7.22 (d, J = 7.9 Hz, 1H), 7.16 (t, J = 7.5 Hz, 1H), 3.82 (t, J = 6.6 Hz, 2H), 3.62 (t, J = 7.8 Hz, 4H), 2.80 (t, J = 7.1 Hz, 2H), 2.72 (t, J = 7.7 Hz, 4H), 1.91 (m, 2H).178.7, 160.9, 142.8, 131.2, 131.1, 122.8, 120.7, 119.4, 109.9, 64.7, 54.5, 52.2, 37.1, 22.6.348.148 9
4d87Yellow powder217.3-218.912.37 (s, 1H), 9.06 (s, 1H), 8.73 (s, 1H), 7.73 (d, J = 7.5 Hz, 1H), 7.45 (t, J = 7.7 Hz, 1H), 7.29 (d, J = 7.8 Hz, 1H), 7.17 (t, J = 7.5 Hz, 1H), 3.85 (t, J = 6.8 Hz, 2H), 3.40 (m, 1H), 3.18 (m, 2H), 2.97 (t, J = 6.3 Hz, 2H), 2.03 (t, J = 7.5 Hz, 2H), 1.82 (m, 2H), 1.67 (m, 2H), 1.54 (m, 2H), 1.25 (d, J = 7.9 Hz, 3H).178.7, 160.9, 142.6, 131.2, 131.1, 122.9, 120.8, 119.5, 109.9, 58.3, 51.1, 49.5, 36.7, 31.1, 30.7, 22.5, 21.0, 17.3.360.185 8
4e76Yellow powder231.2-232.512.38 (s, 1H), 9.08 (s, 1H), 8.74 (s, 1H), 7.73 (d, J = 7.5 Hz, 1H), 7.46 (t, J = 7.7 Hz, 1H), 7.26 (d, J = 7.9 Hz, 1H), 7.17 (t, J = 7.5 Hz, 1H), 3.84 (t, J = 6.8 Hz, 2H), 3.09 (t, J = 7.1 Hz, 2H), 3.04 (m, 4H), 1.98 (m, 2H), 1.14 (t, J = 7.3 Hz, 6H).178.7, 160.8, 142.8, 131.2, 131.1, 122.8, 120.7, 119.4, 109.9, 49.1, 46.2, 37.1, 23.2, 9.9.334.170 2
4f87Yellow powder225.8-226.512.42 (s, 1H), 9.05 (s, 1H), 8.70 (s, 1H), 7.71 (d, J = 7.5 Hz, 1H), 7.44 (t, J = 7.7 Hz, 1H), 7.21 (d, J = 7.9 Hz, 1H), 7.15 (t, J = 7.5 Hz, 1H), 3.77 (t, J = 6.8 Hz, 2H), 3.66 (t, J = 7.4 Hz, 4H), 2.74 (t, J = 7.2 Hz, 4H), 2.69 (t, J = 6.9 Hz, 2H), 1.66 (m, 2H), 1.57 (m, 2H).178.7, 160.8, 142.7, 131.2, 131.1, 122.8, 120.7, 119.4, 110.0, 64.7, 56.6, 56.0, 52.2, 24.4, 21.7.362.165 1
4g84Yellow powder217.3-218.912.42 (s, 1H), 9.03 (s, 1H), 8.69 (s, 1H), 7.70 (d, J = 7.5 Hz, 1H), 7.42 (t, J = 7.7 Hz, 1H), 7.20 (d, J = 7.9 Hz, 1H), 7.14 (t, J = 7.5 Hz, 1H), 3.76 (t, J = 6.9 Hz, 2H), 3.43 (t, J = 7.0 Hz, 2H), 3.02 (m, 1H), 2.87 (m, 2H), 1.67 (t, J = 7.6 Hz, 2H), 1.62 (m, 2H), 1.57 (m, 2H), 1.53 (m, 2H), 1.35 (m, 2H), 1.11 (d, J = 6.3 Hz, 3H).178.6, 160.7, 142.7, 131.2, 131.1, 122.8, 120.7, 119.3, 110.0, 56.4, 56.0, 51.6, 50.4, 48.5, 31.8, 24.5, 23.71, 21.4, 18.5.374.201 5
4h64Yellow powder297.5-298.512.42 (s, 1H), 9.08 (s, 1H), 8.73 (s, 1H), 7.71 (d, J = 7.1 Hz, 1H), 7.44 (t, J = 7.8, 1.0 Hz, 1H), 7.21 (d, J = 7.9 Hz, 1H), 7.16 (t, J = 7.5 Hz, 1H), 3.77 (t, J = 6.9 Hz, 2H), 2.73 (t, J = 7.9 Hz, 2H), 2.64 (m, 4H), 1.66 (m, 2H), 1.50 (m, 2H), 1.01 (t, J = 6.8 Hz, 6H).178.7, 160.7, 142.7, 131.2, 131.1, 122.8, 120.7, 119.4, 110.0, 51.1, 48.5, 46.33, 38.8, 24.5, 10.1.347.178 0
5a77Yellow powder216.1-217.912.43 (s, 1H), 7.54 (d, J = 7.4 Hz, 1H), 7.42 (t, J = 7.7 Hz, 1H), 7.16 (d, J = 7.5 Hz, 1H), 7.03 (t, J = 7.7 Hz, 1H), 3.94 (s, 2H, S-CH2), 3.82 (t, J = 6.4 Hz, 2H), 3.51 (t, J = 4.6 Hz, 4H), 2.55 (t, J = 6.5 Hz, 2H), 2.45 (t, J = 4.8 Hz, 4H).184.3, 175.1, 157.2, 143.7, 143.5, 132.0, 122.3, 120.8, 120.1, 109.4, 66.0, 54.9, 53.1, 36.4, 33.4.372.112 5
5b70Yellow powder265.0-266.311.52 (s, 1H), 7.55 (d, J = 7.2 Hz, 1H), 7.44 (t, J = 7.5 Hz, 1H), 7.25 (d, J = 6.9 Hz, 1H), 7.10 (t, J = 6.7 Hz, 1H), 4.02 (s, 2H, S-CH2), 3.96 (t, J = 7.2 Hz, 2H), 3.26 (t, J = 6.0 Hz, 2H), 3.12 (m, 1H), 2.93 (t, J = 7.0 Hz, 2H), 1.76 (m, 2H), 1.46 (m, 2H), 1.17 (d, J = 6.3 Hz, 3H).186.2, 178.7, 160.9, 142.5, 131.1, 131.0, 122.9, 120.7, 119.5, 110.1, 56.3, 50.6, 50.4, 48.9, 35.1, 31.8, 24.3, 22.2, 17.2.384.148 9
5c76Yellow powder210.5-211.412.44 (s, 1H), 7.54 (d, J = 7.3 Hz, 1H), 7.42 (t, J = 7.7 Hz, 1H), 7.11 (d, J = 7.9 Hz, 1H), 7.07 (t, J = 7.5 Hz, 1H), 3.93 (s, 2H, S-CH2), 3.74 (t, J = 6.7 Hz, 2H), 3.49 (t, J = 4.7 Hz, 4H), 2.34 (t, J = 7.3 Hz, 2H), 2.30 (t, J = 4.9 Hz, 4H), 1.76 (m, 2H).186.8, 178.7, 160.9, 142.8, 131.2, 131.1, 122.8, 120.7, 119.4, 109.9, 64.7, 54.5, 52.2, 37.1, 27.4, 22.6.386.128 7
5d72Yellow powder200.2-203.012.42 (s, 1H), 7.53 (d, J = 7.3 Hz, 1H), 7.40 (t, J = 7.5 Hz, 1H), 7.11 (d, J = 7.4 Hz, 1H), 7.06 (t, J = 7.6 Hz, 1H), 3.91 (s, 2H, S-CH2), 3.70 (t, J = 7.1 Hz, 2H), 3.55 (t, J = 4.1 Hz, 4H), 2.37 (t, J = 4.3 Hz, 4H), 2.33 (t, J = 7.3 Hz, 2H), 1.61 (m, 2H), 1.46 (m, 2H).187.5, 178.7, 160.7, 142.7, 131.2, 131.1, 122.8, 120.7, 119.4, 110.0, 64.7, 56.5, 52.2, 38.8, 24.4, 21.7, 18.5.402.160 0
), ArticleFig(id=1209847827509940702, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=null, figureFileBig=null, tableContent=
Compd.IC50/μmol·L-1
HeLaMGC-803MCF-7RBL-2H3L-929
4a38.7 ± 1.449.6 ± 8.682.6 ± 1.954.2 ± 1.239.7 ± 2.0
4b8.1 ± 2.047.6 ± 5.124.5 ± 4.658.5 ± 7.853.2 ± 5.9
4c22.6 ± 1.362.7 ± 2.441.3 ± 5.247.2 ± 1.146.4 ± 3.2
4d14.7 ± 5.239.4 ± 3.428.0 ± 1.231.4 ± 5.661.6 ± 2.4
4e49.6 ± 1.150.9 ± 1.035.6 ± 3.439.9 ± 5.182.1 ± 2.1
4f72.3 ± 1.350.7 ± 8.745.5 ± 1.269.3 ± 7.211.5 ± 1.1
4g44.0 ± 2.276.7 ± 1.281.4 ± 5.959.2 ± 8.154.6 ± 4.2
4h83.7 ± 1.963.1 ± 9.467.2 ± 2.681.6 ± 3.445.0 ± 1.1
5a33.0 ± 4.049.9 ± 6.615.2 ± 3.651.6 ± 7.239.7 ± 6.3
5b12.6 ± 2.916.4 ± 1.812.0 ± 1.336.8 ± 1.974.4 ± 1.6
5c43.4 ± 1.644.7 ± 6.744.9 ± 5.070.9 ± 1.579.2 ± 1.2
5d82.4 ± 1.962.6 ± 1.081.3 ± 1.982.3 ± 3.047.4 ± 1.7
Cisplatin40.1 ± 4.166.6 ± 6.88.4 ± 2.049.8 ± 6.752.0 ± 8.7
), ArticleFig(id=1209847827593826785, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Table 2, caption=

Anti-proliferative activity of compounds 4a-4h and 5a-5d

, figureFileSmall=null, figureFileBig=null, tableContent=
Compd.IC50/μmol·L-1
HeLaMGC-803MCF-7RBL-2H3L-929
4a38.7 ± 1.449.6 ± 8.682.6 ± 1.954.2 ± 1.239.7 ± 2.0
4b8.1 ± 2.047.6 ± 5.124.5 ± 4.658.5 ± 7.853.2 ± 5.9
4c22.6 ± 1.362.7 ± 2.441.3 ± 5.247.2 ± 1.146.4 ± 3.2
4d14.7 ± 5.239.4 ± 3.428.0 ± 1.231.4 ± 5.661.6 ± 2.4
4e49.6 ± 1.150.9 ± 1.035.6 ± 3.439.9 ± 5.182.1 ± 2.1
4f72.3 ± 1.350.7 ± 8.745.5 ± 1.269.3 ± 7.211.5 ± 1.1
4g44.0 ± 2.276.7 ± 1.281.4 ± 5.959.2 ± 8.154.6 ± 4.2
4h83.7 ± 1.963.1 ± 9.467.2 ± 2.681.6 ± 3.445.0 ± 1.1
5a33.0 ± 4.049.9 ± 6.615.2 ± 3.651.6 ± 7.239.7 ± 6.3
5b12.6 ± 2.916.4 ± 1.812.0 ± 1.336.8 ± 1.974.4 ± 1.6
5c43.4 ± 1.644.7 ± 6.744.9 ± 5.070.9 ± 1.579.2 ± 1.2
5d82.4 ± 1.962.6 ± 1.081.3 ± 1.982.3 ± 3.047.4 ± 1.7
Cisplatin40.1 ± 4.166.6 ± 6.88.4 ± 2.049.8 ± 6.752.0 ± 8.7
), ArticleFig(id=1209847827669324260, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=EN, label=null, caption=null, figureFileSmall=null, figureFileBig=null, tableContent=
Compd.H-Bonds interactionp-π conjugation
4aSer143; His155-
4bSer143-
4cSer143; His155-
4dSer143; Arg246-
4eSer143; His141-
4fSer143; His154; His155-
4gSer143; His154-
4hHis155; His141-
5aLys130; His140Lys135
5bSer143; His141; Lys135-
5cLys130; Lys135; Ser143-
5dSer143; His155-
PAPHis141; His140; Ser143; Lys135-
), ArticleFig(id=1209847827753210344, tenantId=1146029695717560320, journalId=1189982191388893191, articleId=1209792676183011523, language=CN, label=Table 3, caption=

Molecular docking of compounds 4a-4h and 5a-5d

, figureFileSmall=null, figureFileBig=null, tableContent=
Compd.H-Bonds interactionp-π conjugation
4aSer143; His155-
4bSer143-
4cSer143; His155-
4dSer143; Arg246-
4eSer143; His141-
4fSer143; His154; His155-
4gSer143; His154-
4hHis155; His141-
5aLys130; His140Lys135
5bSer143; His141; Lys135-
5cLys130; Lys135; Ser143-
5dSer143; His155-
PAPHis141; His140; Ser143; Lys135-
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靛红衍生物类棕榈酰基转移酶抑制剂的设计、合成及抗肿瘤活性研究
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余伟 1 , 董金娇 1 , 朱昕悦 1 , 杨侃 1 , 刘振明 2 , 乔晓强 1, 3 , 宋亚丽 1, *
药学学报 | 研究论文 2022,57(4): 1073-1079
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药学学报 | 研究论文 2022, 57(4): 1073-1079
靛红衍生物类棕榈酰基转移酶抑制剂的设计、合成及抗肿瘤活性研究
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余伟1, 董金娇1, 朱昕悦1, 杨侃1, 刘振明2, 乔晓强1, 3, 宋亚丽1, *
作者信息
  • 1.河北大学药学院, 河北省药物质量分析控制重点实验室, 河北 保定 071002
  • 2.北京大学, 天然药物及仿生药物国家重点实验室, 北京 100191
  • 3.河北大学, 药物化学与分子诊断教育部重点实验室, 河北 保定 071002

通讯作者:

*宋亚丽, E-mail:
Design, synthesis and antitumor activity of isatin derivatives as palmitoyl transferase inhibitors
Wei YU1, Jin-jiao DONG1, Xin-yue ZHU1, Kan YANG1, Zhen-ming LIU2, Xiao-qiang QIAO1, 3, Ya-li SONG1, *
Affiliations
  • 1. College of Pharmaceutical Sciences, Key Laboratory of Pharmaceutical Quality Control of Hebei Province, Hebei University, Baoding 071002, China
  • 2. State Key Laboratory of Natural and Biomimetic Drugs, Peking University, Beijing 100191, China
  • 3. Key Laboratory of Medicinal Chemistry and Molecular Diagnosis of Ministry of Education, Hebei University, Baoding 071002, China
出版时间: 2022-04-12 doi: 10.16438/j.0513-4870.2021-1389
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基于已知化合物的化学结构, 利用生物电子等排体原理, 结合分子对接技术设计合成了12个靛红衍生物类棕榈酰基转移酶抑制剂, 测定了其体外抗肿瘤活性并进行了分子对接研究。目标化合物结构均已由核磁共振氢谱(1H NMR)、核磁共振碳谱(13C NMR) 和高分辨质谱(HR-MS) 进行了确证。体外抗肿瘤实验结果表明, 化合物5b对棕榈酰基转移酶高表达的MCF-7细胞表现出的抑制活性与对照药(IC50 = 8.4 μmol·L-1) 相当, IC50为12.0 μmol·L-1。化合物4b对HeLa细胞(IC50 = 8.1 μmol·L-1) 的抑制活性优于顺铂(IC50 = 40.1 μmol·L-1)。同时分子对接结果表明, 化合物均能完全进入3'-磷酸腺苷-5'-二磷酸(PAP) 活性口袋内, 且5b打分值最好, 具有进一步的研究价值。

靛红衍生物  /  棕榈酰基转移酶  /  合成  /  分子对接  /  抗肿瘤活性

Based on the chemical structure of known compound, 12 isatin derivatives palmitoyl transferase inhibitors are designed and synthesized using bioisosterism and molecular docking, while their anti-tumor activities in vitro are determined. The structures of the target compounds are confirmed by 1H NMR, 13C NMR and HR-MS. In vitro anti-tumor assay illustrates that compound 5b exhibits similar anti-tumor activity to the control (IC50 = 8.4 μmol·L-1), with IC50 value of 12.0 μmol·L-1 against MCF-7 in which palmitoyl transferase is highly expressed. Compound 4b shows higher inhibitory activity against HeLa (IC50 = 8.1 μmol·L-1) than cisplatin (IC50 = 40.1 μmol·L-1). The molecular docking demonstrates that all compounds could completely enter the site of 3'-adenosine monophosphate-5'-diphosphate (PAP). Taken together, isatin derivatives represent promising compounds for the discovery of novel anti-tumor agents.

isatin derivative  /  palmitoyl transferase  /  synthesis  /  molecular docking  /  anti-tumor activity
余伟, 董金娇, 朱昕悦, 杨侃, 刘振明, 乔晓强, 宋亚丽. 靛红衍生物类棕榈酰基转移酶抑制剂的设计、合成及抗肿瘤活性研究. 药学学报, 2022 , 57 (4) : 1073 -1079 . DOI: 10.16438/j.0513-4870.2021-1389
Wei YU, Jin-jiao DONG, Xin-yue ZHU, Kan YANG, Zhen-ming LIU, Xiao-qiang QIAO, Ya-li SONG. Design, synthesis and antitumor activity of isatin derivatives as palmitoyl transferase inhibitors[J]. Acta Pharmaceutica Sinica, 2022 , 57 (4) : 1073 -1079 . DOI: 10.16438/j.0513-4870.2021-1389
靛红即二氢吲哚-2, 3-二酮, 在多种植物中广泛分布, 是一类重要的氮杂环化合物[1]。其衍生物具有多种生物活性, 在抗肿瘤、抗病毒、神经保护等方面具有重要的意义, 其中最突出的作用是抗肿瘤活性[2, 3]。最近几年研究表明, 靛红衍生物在体内体外均具有良好的抗肿瘤活性, Fares等[4]将靛红与喹唑啉结构进行杂合, 制备了一系列新颖的靛红衍生物, 实验结果表明化合物1具有较强的体外抗肿瘤活性。Solomon等[5]将靛红与苯并噻唑进行缀合, 合成了新型的希夫碱类衍生物2, 对人体的乳腺癌细胞具有一定程度的抑制活性。Eldehna等[6]利用药效团杂合的原理, 将靛红与吡啶基团进行杂合得到化合物3, 对肿瘤细胞也有一定的细胞毒活性。有些靛红衍生物已经用于临床, 例如辉瑞制药研发的多靶点小分子酪氨酸激酶抑制剂舒尼替尼(sunitinib) 于2006年被FDA批准上市, 用于治疗晚期肾细胞癌等疾病; 勃林格殷格翰公司研发的三联血管生成抑制剂尼达尼布(nintedanib) 于2014年11月在德国获批上市, 用于治疗特定类型的晚期肺癌。因此, 设计以不同片段修饰的靛红衍生物, 合成了具有代表性的抗肿瘤化合物, 具体结构如图 1所示[7]
棕榈酰化修饰是一种广泛存在并且可逆的蛋白质翻译后脂质修饰, 对蛋白质的定位、扩散和稳定性的动态调控至关重要。多种癌细胞的增殖、迁移和侵袭都依赖于癌症相关蛋白的棕榈酰化, 大量数据证明, 与正常细胞比较, 在卵巢癌、乳腺癌、结肠癌、肾癌和前列腺癌中DHHC20表达水平均上调[8]。人类棕榈酰基转移酶家族的23个成员多数都参与肿瘤的调节, 使得靶向棕榈酰基转移酶成为潜在的肿瘤治疗策略。Ducker等[9]发现了5个棕榈酰基转移酶抑制剂, 其结构如图 2所示。Jennings等[10]对5个化合物进行的棕榈酰基转移酶抑制活性实验显示, 所有化合物对棕榈酰基转移酶均有不同程度的抑制作用, 其中化合物Ⅴ的抑制作用最强。进一步的作用机制研究显示, 化合物Ⅴ对酶的抑制作用是可逆的, 且安全性更高。分子对接分析其与棕榈酰基转移酶的作用方式, 发现这5个化合物均可进入3'-磷酸腺苷-5'-二磷酸(PAP) 结合位点, Ⅰ、Ⅲ仅与His155有氢键作用; Ⅱ仅与Ser143有氢键作用; Ⅳ仅与His154有π-π共轭作用; Ⅴ与Lys135、His140、His141、Ser143有氢键作用且打分值最高, 同时也与PAP作用方式更为接近, 因此, 以化合物Ⅴ的结构为基础, 通过生物电子等排的方法将苯并氢化噻吩酮骨架替换成靛红结构, 并围绕此结构进行修饰, 有可能寻找到特异性更好、抑制作用可逆的棕榈酰基转移酶抑制剂。
2018年Rana等[11]报道了棕榈酰基转移酶的结构, 其蛋白晶体结构(PDB ID: 6BML) 中的配体小分子PAP所处的活性口袋是棕榈酰CoA的结合位点。本项目以配体小分子PAP所处的口袋作为活性位点, 利用生物电子等排理论, 将化合物Ⅴ的苯并氢化噻吩酮骨架替换为生物电子等排体靛红, 根据PAP的结构及其与氨基酸残基的相互作用特点, 在靛红的1位引入碱性基团二级胺结构; PAP所在口袋含有多种极性氨基酸(如组氨酸、丝氨酸、精氨酸等), 氨基硫脲带有1个硫原子和3个氮原子, 可以与周围的氨基酸残基形成良好的相互作用, 如氢键、p-π共轭等, 分子对接结果也进一步验证了这一猜想: 3位引入氨基硫脲结构可以增加与PAP结合位点Ser143、His141等极性氨基酸的相互作用。再在此结构基础上利用分子对接对其进行结构优化, 将3位氨基硫脲的部分结构环化形成噻唑烷酮, 增加的羰基氧原子还可以和PAP结合位点的氨基酸残基形成氢键, 增强与靶蛋白的相互作用, 设计了的靛红衍生物类棕榈酰基转移酶抑制剂。结构如图 3所示。
目标化合物4a~4h5a~5d的合成路线如图 4所示。中间体23的合成采用文献报道的方法进行[12, 13]。以靛红为原料, 在碱性条件下, 分别与1, 2-二溴乙烷、1, 3-二溴丙烷或1, 4-二溴丁烷发生取代反应, 得到中间产物2; 再在碱性条件下引入吗啉环等二级胺得到中间产物3; 中间产物3与氨基硫脲经过缩合反应得到目标化合物4; 化合物4与2-溴乙酸乙酯在碱性条件下环合生成化合物5。目标化合物4a~4h5a~5d的结构经1H NMR、13C NMR和HR-MS进行了确证, 其收率、性状、熔点及波谱数据见表 1
本部分实验以顺铂为阳性对照药物, 选取MGC-803、HeLa、MCF-7、RBL-2H3和L-929细胞对目标化合物进行细胞毒性实验, 结果见表 2。抗增殖结果表明, 目标化合物对所测试的细胞具有不同程度的抑制活性, 其中化合物5a5b对MCF-7细胞表现出较好的抗增殖活性, IC50值分别为15.2和12.0 μmol·L-1; 化合物4b4d5b对HeLa细胞表现出较好的抑制活性, IC50值分别为8.1、14.7和12.6 μmol·L-1; 化合物4f对L-929细胞体现出一定程度的毒性, 其IC50值为11.5 μmol·L-1, 遗憾的是目标化合物对RBL-2H3细胞的抑制活性都比较差。目标化合物中5b对MCF-7细胞抑制活性最好, 其IC50为12.0 μmol·L-1, 与阳性对照相当。它对棕榈酰基转移酶高表达的癌细胞具有较好的活性, 因此具有成为棕榈酰基转移酶抑制剂先导化合物的潜质。
本实验选择化合物5b来评估它对MCF-7癌细胞的影响, 如图 5所示。由图可知, 在30 μmol·L-1浓度下, 化合物5b能明显引起视野内MCF-7癌细胞的减少, 一定程度上促进其凋亡, 且化合物5b的对MCF-7细胞的IC50为12.0 μmol·L-1, 其结果与抗增殖活性结果一致。
在抗增殖活性实验中, 化合物5b表现出较好的抗癌活性, 故本实验选择化合物5b来评估其对MCF-7癌细胞迁移的影响, 如图 6所示。与阴性对照相比, 化合物5b在15 μmol·L-1浓度下能明显抑制MCF-7癌细胞的迁移, 并且相同浓度下化合物5b对MCF-7细胞的抑制作用比顺铂效果好, 与实验预期的结果一致。
目标化合物的分子对接结果如表 3图 7所示。由表中数据可知, 化合物均能进入PAP活性口袋内, 并且能与周围氨基酸残基产生相互作用力。从图 7可知, 化合物4b靛红结构上的羰基、侧链取代基上的两个氨基都可与氨基酸残基Ser143形成氢键, 将其线性结构进一步改造成环时, 化合物5b母核结构上的羰基保持着与氨基酸残基Ser143的氢键作用, 并且其噻唑烷酮结构上的硫原子可与氨基酸残基His141形成氢键, 羰基可与Lys135形成氢键。与化合物4b相比, 化合物5b与6BML的相互作用和PAP与6BML的相互作用(PAP与氨基酸残基His141、Lys135、Ser143等形成氢键) 更加吻合, 这可能是化合物5b对MCF-7细胞的抗增殖活性强于化合物4b的原因。
基于化合物Ⅴ的化学结构, 利用生物电子等排体原理, 结合分子对接技术设计合成了12个靛红衍生物类棕榈酰基转移酶抑制剂, 测定了其体外抗肿瘤活性并进行了分子对接研究。采用MTT法对该类化合物进行抗肿瘤活性测试, 结果表明, 大部分化合物具有中等的抗肿瘤活性, 其中化合物5b对MCF-7的IC50值小于15 μmol·L-1, 和顺铂抑制活性相当。细胞划痕实验表明, 在15 μmol·L-1浓度下, 化合物5b能明显抑制MCF-7癌细胞的迁移。AO/EB染色实验表明, 化合物5b的浓度为30 μmol·L-1时能显著引起MCF-7癌细胞的凋亡。分子对接结果表明, 化合物均能完全进入PAP活性口袋内, 且生物活性结果越好的化合物, 其作用方式与配体PAP与棕榈酰基转移酶的相互作用方式越吻合, 这为后续研究设计更高效的棕榈酰基转移酶抑制剂提供了思路。
SGW X-4显微熔点仪(上海精密仪器科技有限公司, 未校正); Bruker AVIII-600 MHz核磁共振波谱仪(Bruker); QEXACTIVE高分辨质谱分析仪(Thermo Fisher Scientific); LDZX-30KBS立式压力蒸汽灭菌器(上海申安医疗器厂); W-CJ-ZDF型超净台(上海贺德实验设备厂); 其他试剂和溶剂未经特别说明均为国产或进口分析纯与生物级, 无水试剂均按常规方法处理。
向250 mL圆底烧瓶中加入7.36 g (50 mmol) 化合物1, 用50 mL的N, N-二甲基甲酰胺溶解后, 加入8.29 g (60 mmol) K2CO3, 室温搅拌10 min, 再加入60 mmol 1, 2-二溴乙烷(1, 3-二溴丙烷或1, 4-二溴丁烷), 室温反应, TLC监测反应进程[12]。反应完全后向反应液里倒入100 mL水, 静置过夜, 析出沉淀, 抽滤得粗品。粗品用200目硅胶色谱[V (乙酸乙酯)∶V (石油醚) = 1∶5] 纯化得化合物2。收率54%~75%。
将5 mmol化合物2、6 mmol Na2CO3和6 mmol二级胺置于50 mL圆底烧瓶中, 加入10 mL无水乙腈, 室温反应, TLC监测反应进程[13]。反应完全后抽滤除去固体, 滤液减压蒸馏, 除去溶剂得粗品。粗品用200目硅胶色谱[V (乙酸乙酯)∶V(石油醚) = 1∶2] 纯化得化合物3。产率60%~65%。
将1 mmol化合物3、1 mmol氨基硫脲置于25 mL圆底烧瓶中, 加入5 mL无水乙醇溶解, 搅拌下滴加5滴冰醋酸, 滴加完毕后升温至80 ℃反应, TLC监测反应进程。反应完全后趁热过滤, 热乙醇洗涤, 得粗品。粗品用200目硅胶色谱[V (二氯甲烷)∶V (甲醇) = 100∶1] 纯化得化合物4a。化合物4b~4h参照此法合成, 收率60%~90%。
向25 mL圆底烧瓶中加入0.5 mmol化合物4、0.5 mmol无水乙酸钠、5 mL甲醇, 搅拌下滴加0.6 mmol溴乙酸乙酯, 室温反应, TLC监测反应进程, 反应结束后将反应体系倒入冰水中, 二氯甲烷萃取3次, 合并有机相, 无水硫酸钠干燥后回收溶剂, 经200目硅胶色谱[V (二氯甲烷)∶V (甲醇) = 100∶1] 纯化得化合物5a。化合物5b~5d参照此法合成, 收率60%~80%。
采用MTT法进行体外抗增殖活性研究[14, 15]。选取人胃癌细胞(MGC-803)、人宫颈癌细胞(HeLa)、人乳腺癌细胞(MCF-7) 和大鼠嗜碱性白血病细胞(RBL-2H3) 4种肿瘤细胞进行抗肿瘤活性实验和小鼠成纤维细胞(L-929) 对目标化合物进行细胞毒性实验。将细胞悬液(每毫升4×104个) 接种到96孔板中, 每孔90 μL。在37 ℃、CO2相对浓度为5%、相对湿度为95%的培养箱中培养, 当显微镜观察到细胞单层铺满96孔板底部时, 每孔加入10 μL的不同浓度的化合物。将96孔板放置于培养箱中, 显微镜观察细胞形态, 培养48 h后, 每孔加入10 μL浓度为5 mg·mL-1的MTT的PBS溶液(现配现用, 避光), 继续培养4 h。4 h后, 弃掉96孔板内的培养基, 每孔加入100 μL的DMSO后, 置于摇床轻摇20 min使结晶充分溶解。待结晶溶解, 把96孔板放置在酶标仪上, 设置波长为490 nm, 测定吸光度, 重复测定4次。使用软件GraphPad Prism 8.3计算每个化合物的IC50值。
将细胞悬液接种到12孔板中, 每孔900 μL。将12孔板置于CO2恒温培养箱中, 37 ℃、CO2相对浓度为5%、相对湿度为95%的条件下培养细胞。12 h后每孔加入100 μL不同浓度的化合物, 孵育48 h。弃掉上层培养基, PBS清洗细胞2次, 使用1×Buffer重悬细胞。避光, 加入等量混合均匀的AO/EB染色液, 轻轻混合均匀后室温孵育5 min, 使用荧光倒置显微镜观察拍照[16]
将6孔板置于CO2恒温培养箱中, 37 ℃、CO2相对浓度为5%、相对湿度为95%的条件下培养细胞。直至观察细胞密度达到90%左右后。事先用Marker笔在6孔板底部均匀的划3条平行直线, 用200 μL枪头在与标记线垂直的地方划3条平行线, 划后除去培养基, 用PBS清洗3次, 加入无血清培养基和药物(空白组加入DMSO)。将其放入37 ℃、CO2相对浓度为5%、相对湿度为95%的培养箱中, 按0、12、24、48 h观察结果并拍照。
分子对接使用Maestro 11.9版本的Schrödinger Suite软件。选取DHHC20晶体结构(Protein Data Bank, ID: 6BML) 作为受体, 与目标化合物进行分子对接研究。首先利用Schrödinger Suite软件中的LigPrep模块对目标化合物进行准备优化; 然后, 利用Schrödinger Suite软件中的Protein Preparation Wizard模块对受体蛋白进行能量优化、修复丢失的氨基酸残基和loop区、加氢、删除水分子; 再利用Schrödinger Suite软件中的Glide模块进行受体格点设置; 最后, 利用Glide模块中的Ligand Docking工具进行Glide-XP模式的分子对接。选取打分值最高的构象用PyMoL软件(http://www.pymol.org/) 进行作图[17]
作者贡献: 余伟、董金娇、朱昕悦、宋亚丽负责化合物的设计合成、活性研究及稿件撰写与修改, 杨侃、刘振明和乔晓强参与化合物的合成及分子对接分析。
利益冲突: 本文作者声明无任何利益冲突。
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2022年第57卷第4期
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doi: 10.16438/j.0513-4870.2021-1389
  • 接收时间:2021-09-22
  • 首发时间:2025-12-22
  • 出版时间:2022-04-12
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  • 收稿日期:2021-09-22
  • 修回日期:2021-10-13
基金
河北省高等学校科学技术研究项目(ZD2019060)
国家自然科学基金资助项目(82003597)
河北省自然科学基金资助项目(B2019201359)
河北省青年拔尖人才、河北大学自然科学多学科交叉研究计划资助项目(DXK201912)
河北省硕士研究生创新资助项目(CXZZSS2021012)
大学生创新创业训练项目(2021193)
作者信息
    1.河北大学药学院, 河北省药物质量分析控制重点实验室, 河北 保定 071002
    2.北京大学, 天然药物及仿生药物国家重点实验室, 北京 100191
    3.河北大学, 药物化学与分子诊断教育部重点实验室, 河北 保定 071002

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2种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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