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tenantId=1146029695717560320, journalId=1279045329999892481, language=CN, title=乌蒙乌骨鸡酪氨酸酶基因克隆鉴定与系统发育关系分析, columnId=1282278062347764011, journalTitle=中国畜牧杂志, columnName=遗传育种, runingTitle=null, highlight=null, articleAbstract=本研究旨在克隆鉴定乌蒙乌骨鸡酪氨酸酶(TYR)基因完整编码区并进行生物信息学分析,为明确其影响乌骨鸡乌质特性的分子机制提供参考。以乌蒙乌骨鸡血液基因组DNA为模板,分别在鸡TYR基因5个外显子两端设计5对引物,通过PCR、克隆及测序拼接方法获得TYR基因完整编码区序列(Coding DNA Sequence,CDS),基于生物信息学方法综合分析该基因的结构特征,利用DNAStar 2.0和MEGA 7.0软件分别分析12个鸡形目和6个雁形目TYR基因CDS的相似性与系统发育关系。结果表明,乌蒙乌骨鸡TYR基因全长3 686 bp,包括276 bp 5'UTR、261 bp 3'UTR,部分内含子1~4长度分别为339、45、355、415 bp,外显子1~5长度分别为819、217、148、182、224 bp,CDS长度为1 590 bp,编码529个氨基酸。TYR蛋白分子式为C 2700 H 4071 N 739 O 784 S 29 ,分子质量为60.36 kD,总原子数为8 323,理论等电点(PI)为6.03,属于不稳定亲水性蛋白。乌蒙乌骨鸡TYR蛋白存在1个信号肽模块、1个酪氨酸酶基因家族核心结构域、1个表皮生长因子样结构域及1个跨膜螺旋结构域。序列相似性及分子系统发育关系分析均显示乌蒙乌骨鸡与沐川乌骨鸡、白来航鸡和原鸡等原鸡属物种的亲缘关系最近,与雁形目物种亲缘关系较远。本研究成功克隆获得乌蒙乌骨鸡TYR基因CDS全长序列,编码蛋白包括多个功能结构模块,研究结果可为乌骨鸡乌质性状分子机理解析及鸡形目物种进化探究提供理论依据。, authors=宋兴超, 李新印, 李健, 孟金柱, 吴震洋, 赵园园, 安清明,, authorsList=宋兴超, 李新印, 李健, 孟金柱, 吴震洋, 赵园园, 安清明,, authorCompany=铜仁学院农林工程与规划学院,贵州省梵净山地区生物多样性保护与利用重点实验室, correspAuthors=安清明, authorNote=宋兴超(1982-),男,河北博野人,博士,副教授,主要从事动物遗传育种研究,E-mail:songxingchao_888@126.com;, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=WCgAVmGqrn+Oc2rxHbmCxA==, pdfFileSize=2605480, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=贵州省科技厅科技计划项目(黔科合基础-ZK[2022]一般559);贵州省高层次创新型“千”层次人才培养项目(2024-[2022]-048);贵州省大学生创新创业训练计划项目(S2024106651920);)}, authors=[Author(id=1288192039124713718, tenantId=1146029695717560320, journalId=null, articleId=1279144308741746846, orderNo=null, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=null, email=null, emailSecond=null, emailThird=null, 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[2]李鹏,高巧琴,曲湘勇,等. 120日龄雪峰乌骨鸡乌色度与肌肉黑色素含量的相关性分析[J].经济动物学报, 2019, 23(4):219-222.
[3]Seruggia D, Josa S, Fernández A, et al. The structure and function of the mouse tyrosinase locus[J]. Pigm Cell Melanoma R,2021, 34(2):212-221.
[4]彭灿阳,郭松长,柳序,等.乌骨鸡黑色素沉积机理及相关候选基因[J].动物营养学报, 2018, 30(1):30-36.
[5]Ferguson C A, Kidson S H. Characteristic sequences in the promoter region of the chicken tyrosinase-encoding gene[J].Gene, 1996, 169(2):191-195.
[6]Yang C W, Ran J S, Yu C L, et al. Polymorphism in MC1R,TYR and ASIP genes in different colored feather chickens[J]. 3Biotech, 2019, 9(5):203.
[7]祖盘玉,李维,林家栋,等.赤水乌骨鸡TYR基因多态性及生物信息学分析[J].南方农业学报, 2019, 50(12):2806-2811.
[8]徐志强,李丰耘,赵净颖,等.武定乌骨鸡TYR基因多态性与黑色素沉积的关联研究[J].云南农业大学学报(自然科学), 2021, 36(4):608-615.
[9]Yu S, Wang G, Liao J, et al. Five alternative splicing variants of the TYR gene and their different roles in melanogenesis in the Muchuan black-boned chicken[J]. Br Poult Sci, 2019, 60(1):8-14.
[10]Yu S, Wang G, Liao J, et al. Identification of key microRNAs affecting melanogenesis of breast muscle in Muchuan blackboned chickens by RNA sequencing[J]. Br Poult Sci, 2020,61(3):1466-1799.
[11]宋兴超,王云艳,孟金柱,等.乌蒙乌骨鸡TYR基因启动子区克隆及分子结构特征分析[J].中国畜牧杂志, 2024,60(12):215-223.
[12]Walker J M. The Proteomics Protocols Handbook[M]. New York:Humana Press, 2005:571-607.
[13]Nielsen H. Predicting Secretory Proteins with SignalP[J].Methods Mol Biol, 2017, 1611:59-73.
[14]Letunic I, Khedkar S, Bork P. SMART:recent updates, new developments and status in 2020[J]. Nucleic Acids Res, 2021,49(D1):458-460.
[15]Nganvongpanit K, Kaewkumpai P, Kochagul V, et al. Distribution of melanin pigmentation in 33 organs of Thai black-bone chickens(Gallus gallus domesticus)[J]. Animals(Basel), 2020,10(5):1-13.
[16]Khumpeerawat P, Duangjinda M, Phasuk Y. Factors affecting gene expression associated with the skin color of black-bone chicken in Thailand[J]. Poult Sci, 2021, 100(11):101440.
[17]Liu X, Zhou R, Peng Y, et al. Feather follicles transcriptome profiles in Bashang long-tailed chickens with different plumage colors[J]. Genes Genom, 2019,41(11):1357-1367.
[18]Lai X, Wichers H J, Soler-Lopez M, et al. Structure and function of human tyrosinase and tyrosinase-related proteins[J].Chem, 2018, 24(1):47-55.
[19]Sato S, Otake T, Suzuki C, et al. Mapping of the recessive white locus and analysis of the tyrosinase gene in chickens[J]. Poult Sci, 2007, 86(10):2126-2133.
[20]Song Y, Xu Y, Deng J, et al. CRISPR/Cas9-mediated mutation of tyrosinase(Tyr)3'UTR induce graying in rabbit[J]. Sci Rep,2017, 7(1):1569.
[21]Dongre V B, Awandkar S P, Salunke V M, et al. The investigation on allelic, genotypic frequencies and gene expression study in coding region of tyrosinase gene in Deoni cattle breed of western India[J]. Anim Biotechnol, 2023, 34(2):208-217.
[22]Chen W, Wang H, Dong B, et al. Molecular cloning and expression analysis of tyrosinase gene in the skin of Jining gray goat(Capra hircus)[J]. MCB, 2012, 366(1-2):11-20.
[23]Okumura N, Hayashi T, Sekikawa H, et al. Sequences and mapping of genes encoding porcine tyrosinase(TYR)and tyrosinase-related proteins(TYRP1 and TYRP2)[J]. Anim Genet, 2005, 36(6):513-516.
[24]Zhang X T, Wei K J, Chen Y Y, et al. Molecular cloning and expression analysis of tyr and tyrp1 genes in normal and albino yellow catfish Tachysurus fulvidraco[J]. J Fish Biol, 2018,92(4):979-998.
[25]Boonanuntanasarn S, Yoshizaki G, Iwai K, et al. Molecular cloning, gene expression in albino mutants and gene knockdown studies of tyrosinase mRNA in rainbow trout[J]. Pigment Cell Res, 2004, 17(4):413-421.
[26]郭跃跃,张宇飞,王天骄,等.黑貉TYRP1基因的克隆及生物信息学分析[J].中国畜牧兽医, 2019, 46(5):1299-1307.
[27]王瑞宁,赵子雅,冯硕,等.赤狐DCT基因生物信息学分析[J].黑龙江畜牧兽医, 2019(23):127-130, 173.
[28]宋兴超,刘琳玲,潘虹军,等.水貂酪氨酸酶(TYR)基因克隆、SNPs筛查及其皮肤组织m RNA差异表达分析[J].畜牧兽医学报, 2021, 52(1):66-76.
[29]Thawabteh A M, Jibreen A, Karaman D, et al. Skin pigmentation types, causes and treatment-A review[J]. Molecules, 2023,28(12):4839.
[30]赵宝庆,任伟超,王震,等.酸橙柠檬酸合酶基因电子克隆和生物信息学分析[J].东北林业大学学报, 2019, 47(12):79-83.
[31]Kim Y H, Park S J, Choe S H, et al. Identification and characterization of the tyrosinase gene(TYR)and its transcript variants(TYR_1 and TYR_2)in the crab-eating macaque(Macaca fascicularis)[J]. Gene, 2017, 630(6):21-27.
[32]Yang J, Liu X, Zhang J, et al. Molecular cloning and biochemical analysis of Tyrosinase from the Crested Ibis in China[J].Biochem Genet, 2012, 50(11-12):936-945.
[33]马元,仲颖,郭婧,等.西里伯斯青鳉tyr和slc24a5的克隆及表达分析[J].水生生物学报, 2022, 46(3):282-291.
[34]Takase M, Miura I, Nakata A, et al. Cloning and sequencing of the cDNA encoding tyrosinase of the Japanese pond frog, Rana nigromaculata[J]. Gene, 1992, 121(2):359-363.
[35]Zanna P T, Maida I, Arciuli M, et al. Molecular cloning and biochemical characterization of the skin tyrosinase from Rana esculenta L[J]. Comp Biochem Phys B, 2009, 152(3):234-242.
[36]Zhang X, Qi Y, Pang Y, et al. Identification of polymorphisms in the HERC2-OCA2 gene locus and their association with feather color in quail[J]. J Poult Sci, 2023, 60(2):2023013.
[37]del Hoyo J, Elliot A, Sargatal J. Handbook of the Birds of the World[M]. Barcelona:Lynx Editions, 1994:434-557.
[38]Crowe T M, Bowie R C K, Bloomer P, et al. Phylogenetics,biogeography and classification of, and character evolution in,gamebirds(Aves:Galliformes):effects of character exclusion,data partitioning and missing data[J]. Cladistics, 2006, 22(6):495-532.
[39]Shen Y Y, Liang L, Sun Y B, et al. A mitogenomic perspective on the ancient, rapid radiation in the Galliformes with an emphasis on the Phasianidae[J]. BMC Evol Biol, 2010, 10:132.
[40]崔丽君,张桂贤,王雪娇,等.鸡形目黑素皮质素受体1基因多态性研究[J].畜牧与兽医, 2014, 46(7):10-16.
[41]王加连.基于生物信息学的雁形目鸟类分类及其系统发育关系[J].江苏农业科学, 2012, 40(9):39-41.
[42]吕小艳,李斌强,崔晶,等.基于线粒体基因组分析鸭科部分鸟类的遗传多样性[J].基因组学与应用生物学, 2021,40(Z1):2008-2019.)
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乌蒙乌骨鸡酪氨酸酶基因克隆鉴定与系统发育关系分析
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中国畜牧杂志 | 遗传育种 2026,62(2): 177-185
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中国畜牧杂志 |遗传育种 2026 , 62 (2) : 177 -185
乌蒙乌骨鸡酪氨酸酶基因克隆鉴定与系统发育关系分析
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作者简介:
宋兴超(1982-),男,河北博野人,博士,副教授,主要从事动物遗传育种研究,E-mail:songxingchao_888@126.com;
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出版时间: 2025-12-11 doi: 10.19556/j.0258-7033.20250423-01
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本研究旨在克隆鉴定乌蒙乌骨鸡酪氨酸酶(TYR)基因完整编码区并进行生物信息学分析,为明确其影响乌骨鸡乌质特性的分子机制提供参考。以乌蒙乌骨鸡血液基因组DNA为模板,分别在鸡TYR基因5个外显子两端设计5对引物,通过PCR、克隆及测序拼接方法获得TYR基因完整编码区序列(Coding DNA Sequence,CDS),基于生物信息学方法综合分析该基因的结构特征,利用DNAStar 2.0和MEGA 7.0软件分别分析12个鸡形目和6个雁形目TYR基因CDS的相似性与系统发育关系。结果表明,乌蒙乌骨鸡TYR基因全长3 686 bp,包括276 bp 5'UTR、261 bp 3'UTR,部分内含子1~4长度分别为339、45、355、415 bp,外显子1~5长度分别为819、217、148、182、224 bp,CDS长度为1 590 bp,编码529个氨基酸。TYR蛋白分子式为C 2700 H 4071 N 739 O 784 S 29 ,分子质量为60.36 kD,总原子数为8 323,理论等电点(PI)为6.03,属于不稳定亲水性蛋白。乌蒙乌骨鸡TYR蛋白存在1个信号肽模块、1个酪氨酸酶基因家族核心结构域、1个表皮生长因子样结构域及1个跨膜螺旋结构域。序列相似性及分子系统发育关系分析均显示乌蒙乌骨鸡与沐川乌骨鸡、白来航鸡和原鸡等原鸡属物种的亲缘关系最近,与雁形目物种亲缘关系较远。本研究成功克隆获得乌蒙乌骨鸡TYR基因CDS全长序列,编码蛋白包括多个功能结构模块,研究结果可为乌骨鸡乌质性状分子机理解析及鸡形目物种进化探究提供理论依据。
乌蒙乌骨鸡  /  TYR基因  /  编码区  /  乌质性状  /  系统发育
宋兴超, 李新印, 李健, 孟金柱, 吴震洋, 赵园园, 安清明,. 乌蒙乌骨鸡酪氨酸酶基因克隆鉴定与系统发育关系分析. 中国畜牧杂志, 2026 , 62 (2) : 177 -185 . DOI: 10.19556/j.0258-7033.20250423-01

    贵州省科技厅科技计划项目(黔科合基础-ZK[2022]一般559);贵州省高层次创新型“千”层次人才培养项目(2024-[2022]-048);贵州省大学生创新创业训练计划项目(S2024106651920);

参考文献 引证文献
排序方式:
[1]国家畜禽遗传资源委员会.中国畜禽遗传资源志-家禽志[M].北京:中国农业出版社, 2011.
[2]李鹏,高巧琴,曲湘勇,等. 120日龄雪峰乌骨鸡乌色度与肌肉黑色素含量的相关性分析[J].经济动物学报, 2019, 23(4):219-222.
[3]Seruggia D, Josa S, Fernández A, et al. The structure and function of the mouse tyrosinase locus[J]. Pigm Cell Melanoma R,2021, 34(2):212-221.
[4]彭灿阳,郭松长,柳序,等.乌骨鸡黑色素沉积机理及相关候选基因[J].动物营养学报, 2018, 30(1):30-36.
[5]Ferguson C A, Kidson S H. Characteristic sequences in the promoter region of the chicken tyrosinase-encoding gene[J].Gene, 1996, 169(2):191-195.
[6]Yang C W, Ran J S, Yu C L, et al. Polymorphism in MC1R,TYR and ASIP genes in different colored feather chickens[J]. 3Biotech, 2019, 9(5):203.
[7]祖盘玉,李维,林家栋,等.赤水乌骨鸡TYR基因多态性及生物信息学分析[J].南方农业学报, 2019, 50(12):2806-2811.
[8]徐志强,李丰耘,赵净颖,等.武定乌骨鸡TYR基因多态性与黑色素沉积的关联研究[J].云南农业大学学报(自然科学), 2021, 36(4):608-615.
[9]Yu S, Wang G, Liao J, et al. Five alternative splicing variants of the TYR gene and their different roles in melanogenesis in the Muchuan black-boned chicken[J]. Br Poult Sci, 2019, 60(1):8-14.
[10]Yu S, Wang G, Liao J, et al. Identification of key microRNAs affecting melanogenesis of breast muscle in Muchuan blackboned chickens by RNA sequencing[J]. Br Poult Sci, 2020,61(3):1466-1799.
[11]宋兴超,王云艳,孟金柱,等.乌蒙乌骨鸡TYR基因启动子区克隆及分子结构特征分析[J].中国畜牧杂志, 2024,60(12):215-223.
[12]Walker J M. The Proteomics Protocols Handbook[M]. New York:Humana Press, 2005:571-607.
[13]Nielsen H. Predicting Secretory Proteins with SignalP[J].Methods Mol Biol, 2017, 1611:59-73.
[14]Letunic I, Khedkar S, Bork P. SMART:recent updates, new developments and status in 2020[J]. Nucleic Acids Res, 2021,49(D1):458-460.
[15]Nganvongpanit K, Kaewkumpai P, Kochagul V, et al. Distribution of melanin pigmentation in 33 organs of Thai black-bone chickens(Gallus gallus domesticus)[J]. Animals(Basel), 2020,10(5):1-13.
[16]Khumpeerawat P, Duangjinda M, Phasuk Y. Factors affecting gene expression associated with the skin color of black-bone chicken in Thailand[J]. Poult Sci, 2021, 100(11):101440.
[17]Liu X, Zhou R, Peng Y, et al. Feather follicles transcriptome profiles in Bashang long-tailed chickens with different plumage colors[J]. Genes Genom, 2019,41(11):1357-1367.
[18]Lai X, Wichers H J, Soler-Lopez M, et al. Structure and function of human tyrosinase and tyrosinase-related proteins[J].Chem, 2018, 24(1):47-55.
[19]Sato S, Otake T, Suzuki C, et al. Mapping of the recessive white locus and analysis of the tyrosinase gene in chickens[J]. Poult Sci, 2007, 86(10):2126-2133.
[20]Song Y, Xu Y, Deng J, et al. CRISPR/Cas9-mediated mutation of tyrosinase(Tyr)3'UTR induce graying in rabbit[J]. Sci Rep,2017, 7(1):1569.
[21]Dongre V B, Awandkar S P, Salunke V M, et al. The investigation on allelic, genotypic frequencies and gene expression study in coding region of tyrosinase gene in Deoni cattle breed of western India[J]. Anim Biotechnol, 2023, 34(2):208-217.
[22]Chen W, Wang H, Dong B, et al. Molecular cloning and expression analysis of tyrosinase gene in the skin of Jining gray goat(Capra hircus)[J]. MCB, 2012, 366(1-2):11-20.
[23]Okumura N, Hayashi T, Sekikawa H, et al. Sequences and mapping of genes encoding porcine tyrosinase(TYR)and tyrosinase-related proteins(TYRP1 and TYRP2)[J]. Anim Genet, 2005, 36(6):513-516.
[24]Zhang X T, Wei K J, Chen Y Y, et al. Molecular cloning and expression analysis of tyr and tyrp1 genes in normal and albino yellow catfish Tachysurus fulvidraco[J]. J Fish Biol, 2018,92(4):979-998.
[25]Boonanuntanasarn S, Yoshizaki G, Iwai K, et al. Molecular cloning, gene expression in albino mutants and gene knockdown studies of tyrosinase mRNA in rainbow trout[J]. Pigment Cell Res, 2004, 17(4):413-421.
[26]郭跃跃,张宇飞,王天骄,等.黑貉TYRP1基因的克隆及生物信息学分析[J].中国畜牧兽医, 2019, 46(5):1299-1307.
[27]王瑞宁,赵子雅,冯硕,等.赤狐DCT基因生物信息学分析[J].黑龙江畜牧兽医, 2019(23):127-130, 173.
[28]宋兴超,刘琳玲,潘虹军,等.水貂酪氨酸酶(TYR)基因克隆、SNPs筛查及其皮肤组织m RNA差异表达分析[J].畜牧兽医学报, 2021, 52(1):66-76.
[29]Thawabteh A M, Jibreen A, Karaman D, et al. Skin pigmentation types, causes and treatment-A review[J]. Molecules, 2023,28(12):4839.
[30]赵宝庆,任伟超,王震,等.酸橙柠檬酸合酶基因电子克隆和生物信息学分析[J].东北林业大学学报, 2019, 47(12):79-83.
[31]Kim Y H, Park S J, Choe S H, et al. Identification and characterization of the tyrosinase gene(TYR)and its transcript variants(TYR_1 and TYR_2)in the crab-eating macaque(Macaca fascicularis)[J]. Gene, 2017, 630(6):21-27.
[32]Yang J, Liu X, Zhang J, et al. Molecular cloning and biochemical analysis of Tyrosinase from the Crested Ibis in China[J].Biochem Genet, 2012, 50(11-12):936-945.
[33]马元,仲颖,郭婧,等.西里伯斯青鳉tyr和slc24a5的克隆及表达分析[J].水生生物学报, 2022, 46(3):282-291.
[34]Takase M, Miura I, Nakata A, et al. Cloning and sequencing of the cDNA encoding tyrosinase of the Japanese pond frog, Rana nigromaculata[J]. Gene, 1992, 121(2):359-363.
[35]Zanna P T, Maida I, Arciuli M, et al. Molecular cloning and biochemical characterization of the skin tyrosinase from Rana esculenta L[J]. Comp Biochem Phys B, 2009, 152(3):234-242.
[36]Zhang X, Qi Y, Pang Y, et al. Identification of polymorphisms in the HERC2-OCA2 gene locus and their association with feather color in quail[J]. J Poult Sci, 2023, 60(2):2023013.
[37]del Hoyo J, Elliot A, Sargatal J. Handbook of the Birds of the World[M]. Barcelona:Lynx Editions, 1994:434-557.
[38]Crowe T M, Bowie R C K, Bloomer P, et al. Phylogenetics,biogeography and classification of, and character evolution in,gamebirds(Aves:Galliformes):effects of character exclusion,data partitioning and missing data[J]. Cladistics, 2006, 22(6):495-532.
[39]Shen Y Y, Liang L, Sun Y B, et al. A mitogenomic perspective on the ancient, rapid radiation in the Galliformes with an emphasis on the Phasianidae[J]. BMC Evol Biol, 2010, 10:132.
[40]崔丽君,张桂贤,王雪娇,等.鸡形目黑素皮质素受体1基因多态性研究[J].畜牧与兽医, 2014, 46(7):10-16.
[41]王加连.基于生物信息学的雁形目鸟类分类及其系统发育关系[J].江苏农业科学, 2012, 40(9):39-41.
[42]吕小艳,李斌强,崔晶,等.基于线粒体基因组分析鸭科部分鸟类的遗传多样性[J].基因组学与应用生物学, 2021,40(Z1):2008-2019.
2026年第62卷第2期
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doi: 10.19556/j.0258-7033.20250423-01
  • 首发时间:2026-07-01
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2种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
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