Article(id=1274057400870003617, tenantId=1146029695717560320, journalId=1192105938417971205, issueId=1274057338156769818, articleNumber=null, orderNo=null, doi=10.13343/j.cnki.wsxb.20250833, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=research-article, receivedDate=1762358400000, receivedDateStr=2025-11-06, revisedDate=null, revisedDateStr=null, acceptedDate=1772640000000, acceptedDateStr=2026-03-05, onlineDate=1781688555209, onlineDateStr=2026-06-17, pubDate=1780502400000, pubDateStr=2026-06-04, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1781688555209, onlineIssueDateStr=2026-06-17, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1781688555209, creator=13701087609, updateTime=1781688555209, updator=13701087609, issue=Issue{id=1274057338156769818, tenantId=1146029695717560320, journalId=1192105938417971205, year='2026', volume='66', issue='6', pageStart='2561', pageEnd='3114', issueExtLink='null', onlineDate='null', pubDate='null', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=1, specialIssue=null, createTime=1781688540257, creator=13701087609, updateTime=1781688602467, updator=13701087609, preIssue=null, nextIssue=null, ext={EN=IssueExt(id=1274057599193486082, tenantId=1146029695717560320, journalId=1192105938417971205, issueId=1274057338156769818, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1274057599193486083, tenantId=1146029695717560320, journalId=1192105938417971205, issueId=1274057338156769818, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null}, startPage=2617, endPage=2633, ext={EN=ArticleExt(id=1274057401268462499, articleId=1274057400870003617, tenantId=1146029695717560320, journalId=1192105938417971205, language=EN, title=Research advances in mechanisms of microbial carbon fixation and sequestration in mangrove sediments, columnId=1192149543727808575, journalTitle=Acta Microbiologica Sinica, columnName=Review, runingTitle=null, highlight=null, articleAbstract=

Mangrove ecosystems, situated at the land-sea interface, serve as vital blue carbon sinks, playing a key role in the global carbon cycle and climate regulation with their efficient carbon sequestration capacity. Microorganisms are central drivers of carbon sequestration in mangrove sediments, capable of fixing carbon through diverse metabolic pathways. This review first summarizes the currently identified microbial carbon fixation pathways and carbon sequestration mechanisms in mangrove sediments, with a focus on three primary processes: the Calvin-Benson-Bassham cycle, the reductive tricarboxylic acid cycle, and the reductive acetyl-CoA (Wood-Ljungdahl) pathway. Furthermore, we discuss the influences of key environmental factors, such as vegetation type, sediment physicochemical properties, and nutrient inputs, on microbial carbon fixation and sequestration. Finally, we propose the future directions for studies on microbial carbon fixation and sequestration in mangrove sediments, including the couplings of nutrient cycling processes, microbiome engineering, and microorganism-plant interactions. This review proposes potential novel strategies for enhancing blue carbon capacity in mangrove ecosystems.

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红树林生态系统位于陆海交汇带，是重要的蓝碳汇，凭借其高效的碳汇能力，在全球碳循环和气候调节中发挥着关键作用。微生物是红树林沉积物中碳储存的核心驱动因素，可通过多种途径实现固碳。本文系统综述了目前红树林沉积物中已发现的微生物固碳途径及其储碳机制，重点关注卡尔文循环、还原型三羧酸循环和还原性乙酰辅酶A途径这3种主要固碳途径及其储碳机制。进一步地，本文阐述了植被类型、沉积物理化性质、营养输入等关键环境因子对微生物碳固定和碳储存的影响。最后，展望了红树林沉积物微生物固碳和储碳的研究前景，包括多元素循环与耦合储碳、微生物组工程以及微生物-植物互作与协同增汇。本文为提高红树林生态系统的蓝碳能力提出了潜在的新策略。

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Summary of microbial carbon fixation pathways in mangrove sediments: taxa, functional genes, and niches

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Carbon fixation pathways	Microbial taxa	Functional genes	Niches
CBB	Pseudomonadota, Halobacteriota, Candidatus Asgardarchaeota, Actinomycetota, Thermoplasmatota	cbbL/cbbM, cbbS, prkB, rbcL/S	Surface layer
rTCA	Campylobacterota, Thermoplasmatota	aclA/B, korABCD, frdABCDE, ccsA/B, ccl	Middle layer, deep layer
WL	Pseudomonadota, Chloroflexota, Acidobacteriota, Spirochaetota, Nitrospirota, Halobacteriota, Thermoproteota, Thermoplasmatota	acsA/B, cdhA/C, fhs, fdhA	Deep layer
3-HP	Haven’t been explicitly reported in mangrove sediments	mcr, mcl, meh, mct-K14470	There is no evidence that these pathways constitute a complete function in mangrove sediments
DC/4HB		porABCD, porG, mcmA1/A2, hed, K15039
3HP/4HB		fumABCDE, sucD/C, hcd, K15016
rGly		gcvP, gcvT, gcvH, fhs, fchA, folD, glyA

), ArticleFig(id=1274088179759092520, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1274057400870003617, language=CN, label=表1, caption=

红树林沉积物中不同固碳途径的类群、功能基因与生态位特征

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Carbon fixation pathways	Microbial taxa	Functional genes	Niches
CBB	Pseudomonadota, Halobacteriota, Candidatus Asgardarchaeota, Actinomycetota, Thermoplasmatota	cbbL/cbbM, cbbS, prkB, rbcL/S	Surface layer
rTCA	Campylobacterota, Thermoplasmatota	aclA/B, korABCD, frdABCDE, ccsA/B, ccl	Middle layer, deep layer
WL	Pseudomonadota, Chloroflexota, Acidobacteriota, Spirochaetota, Nitrospirota, Halobacteriota, Thermoproteota, Thermoplasmatota	acsA/B, cdhA/C, fhs, fdhA	Deep layer
3-HP	Haven’t been explicitly reported in mangrove sediments	mcr, mcl, meh, mct-K14470	There is no evidence that these pathways constitute a complete function in mangrove sediments
DC/4HB		porABCD, porG, mcmA1/A2, hed, K15039
3HP/4HB		fumABCDE, sucD/C, hcd, K15016
rGly		gcvP, gcvT, gcvH, fhs, fchA, folD, glyA

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