Article(id=1297571034408968781, tenantId=1146029695717560320, journalId=1192105938417971205, issueId=1297570992835023717, articleNumber=null, orderNo=null, doi=10.13343/j.cnki.wsxb.20260127, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=research-article, receivedDate=1770652800000, receivedDateStr=2026-02-10, revisedDate=null, revisedDateStr=null, acceptedDate=1776009600000, acceptedDateStr=2026-04-13, onlineDate=1787294642306, onlineDateStr=2026-08-21, pubDate=1785772800000, pubDateStr=2026-08-04, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1787294642306, onlineIssueDateStr=2026-08-21, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1787294642306, creator=13701087609, updateTime=1787294642306, updator=13701087609, issue=Issue{id=1297570992835023717, tenantId=1146029695717560320, journalId=1192105938417971205, year='2026', volume='66', issue='8', pageStart='3681', pageEnd='4288', issueExtLink='null', onlineDate='null', pubDate='1785772800000', pubDateStr='2026-08-04', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=1, issueType=-1, specialIssue=null, createTime=1787294632395, creator='13701087609', updateTime=1787294931551, updator='13701087609', preIssue=null, nextIssue=null, articleTotal=null, ext={EN=IssueExt(id=1297572247670124783, tenantId=1146029695717560320, journalId=1192105938417971205, issueId=1297570992835023717, language=EN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=), CN=IssueExt(id=1297572247670124784, tenantId=1146029695717560320, journalId=1192105938417971205, issueId=1297570992835023717, language=CN, specialIssueTitle=, coverIllustrator=null, specialIssueEditor=, specialIssueAbout=)}, issueFiles=null, downloadFileDto=null}, startPage=3926, endPage=3952, ext={EN=ArticleExt(id=1297571034627072590, articleId=1297571034408968781, tenantId=1146029695717560320, journalId=1192105938417971205, language=EN, title=Comparison of gut microbiome and metabolome characteristics in preterm and full-term infants under different feeding modes, columnId=1192149543992045670, journalTitle=Acta Microbiologica Sinica, columnName=Research Article, runingTitle=null, highlight=null, articleAbstract=
Early life is a critical window for the establishment of the infant gut microbiome and the shaping of its metabolic functions, and gestational age and feeding mode are considered key determinants of this process. [Objective] To compare the fecal gut microbiome and metabolome between preterm and full-term infants under breastfeeding and non-breastfeeding conditions, thus exploring the effects of feeding mode and gestational age on early-life gut microbial ecology and metabolic features. [Methods] Infants were assigned into four groups: breastfeeding preterm infants (BPI), non-breastfeeding preterm infants (NBPI), breastfeeding full-term infants (BTI), and non-breastfeeding full-term infants (NBTI), with 10 infants per group. The 16S rRNA gene sequencing and untargeted metabolomics analysis were performed. Alpha/beta diversity analyses, differential abundance testing, and linear discriminant analysis effect size (LEfSe) were performed to identify key microbial taxa. Partial least squares-discriminant analysis (PLS-DA), volcano plots, and KEGG pathway enrichment were employed to determine differential metabolites and functional pathways, followed by microbiome-metabolite association network analysis. [Results] The 16S rRNA gene sequencing showed that the gut microbiome in the BTI group was dominated by Actinomycetota, Bifidobacterium (45.98%), and Bifidobacterium breve, forming a typical “breastfeeding-type” structure. The BPI group showed enrichment of Pseudomonadota and Streptococcus, with attenuated dominance of Bifidobacterium. Among non-breastfed infants, the NBTI group was dominated by Enterococcus (59.20%), whereas the NBPI group showed a fluctuating gut microbiome. Untargeted metabolomics further revealed functional differences consistent with these compositional patterns. KEGG enrichment indicated that differential metabolites were mainly involved in amino acid metabolism, lipid metabolism, bile acid-related pathways, and carbohydrate digestion and absorption. At the level of key metabolites, the BPI group showed significant enrichment of metabolites related to antioxidant and immune support, such as glutathione and vitamin D sulfate conjugates; the BTI group enriched long-chain polyunsaturated fatty acids and indole-derived metabolites; and non-breastfeeding groups generally exhibited accumulation of fermentable carbohydrates and specific bile acid derivatives. Correlation analysis confirmed a strong positive association between Bifidobacterium and indole-related metabolite outputs in breastfeeding groups, whereas microbiome–metabolite networks were looser in non-breastfeeding groups. [Conclusion] Both gestational age and feeding mode are related to differences in the early gut microbiome structure and related metabolic characteristics of infants, with the association between feeding mode and metabolic profile differences being more prominent. Gestational age may affect the establishment pattern of dominant microbial taxa in the context of breastfeeding. As a pioneering exploratory study, this study preliminarily reveals the specificity of gut microbiome structure and functional metabolism in different populations of infants, providing a basis for subsequent prospective cohort validation, mechanism research, and early nutritional intervention optimization.
, authors=Jiaqi YIN
1, Shuang WANG
2, Jiaqi LIU
1, Lina DING
1, Jing ZOU
1, Junwen LIU
1, Yao JIN
1, Ping LI
1, Qing GU
1, Jiarun HAN
1, authorsList=Jiaqi YIN, Shuang WANG, Jiaqi LIU, Lina DING, Jing ZOU, Junwen LIU, Yao JIN, Ping LI, Qing GU, Jiarun HAN, authorCompany=null, correspAuthors=Qing GU, Jiarun HAN, authorNote=
These authors contributed equally to this work.
, correspAuthorsNote=
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生命早期是婴儿肠道微生态建立与代谢功能塑形的关键窗口期,胎龄与喂养方式被认为是影响该过程的核心决定因素。 【目的】 比较早产与足月婴儿在母乳与非母乳喂养条件下粪便肠道微生物组及代谢组的差异,解析不同喂养方式与胎龄对婴儿早期肠道微生态及代谢特征的影响。 【方法】 将受试婴儿分为早产母乳喂养(breastfeeding preterm infants, BPI)、早产非母乳喂养(non-breastfeeding preterm infants, NBPI)、足月母乳喂养(breastfeeding full-term infants, BTI)、足月非母乳喂养(non-breastfeeding full-term infants, NBTI) 4组,每组10例,进行16S rRNA基因肠道微生物组测序及非靶向代谢组学分析。采用α/β多样性分析、差异丰度分析与线性判别分析效应大小(linear discriminant analysis effect size, LEfSe)筛选关键肠道微生物菌群;通过偏最小二乘判别分析(partial least squares-discriminant analysis, PLS-DA)、火山图与KEGG通路富集分析鉴定差异代谢物与功能通路,并构建微生物-代谢物关联网络。 【结果】 16S rRNA测序结果显示,BTI组以放线菌门(Actinomycetota)、双歧杆菌属(Bifidobacterium)、短双歧杆菌(Bifidobacterium breve)为特征性优势菌(双歧杆菌属占比45.98%),形成典型的“母乳型”结构;BPI组则以假单胞菌门(Pseudomonadota)与链球菌属(Streptococcus)富集为特征,双歧杆菌优势减弱。非母乳喂养组中,NBTI组以肠球菌属(Enterococcus)为优势属(59.20%),NBPI组菌群结构波动较大。非靶向代谢组学进一步揭示了与上述菌群结构对应的功能差异。KEGG通路富集表明差异主要集中于氨基酸代谢、脂质代谢、胆汁酸相关通路及碳水化合物消化吸收等通路。关键代谢物层面,BPI组中谷胱甘肽、维生素D硫酸酯等与抗氧化和免疫支持相关的代谢物显著富集,BTI组富集长链多不饱和脂肪酸与吲哚类代谢物,非母乳喂养组普遍积累可发酵碳水化合物及特定胆汁酸衍生物。相关性分析表明,母乳喂养组中双歧杆菌与吲哚类代谢物水平呈强正相关,而非母乳喂养组的菌群-代谢物关联网络更为松散。 【结论】 胎龄与喂养方式均与婴儿早期肠道菌群结构及代谢特征差异相关,其中喂养方式与代谢谱差异的关联更为突出,胎龄可能影响母乳喂养背景下优势菌群的建立模式。本研究作为一项先导性探索,初步揭示了不同群体婴儿肠道菌群结构与功能代谢的特异性,为后续前瞻性队列验证、机制研究及早期营养干预优化提供了依据。
, authors=殷家琪
1, 王爽
2, 刘嘉琦
1, 丁丽娜
1, 邹静
1, 刘骏文
1, 金瑶
1, 郦萍
1, 顾青
1, 韩佳润
1, authorsList=殷家琪, 王爽, 刘嘉琦, 丁丽娜, 邹静, 刘骏文, 金瑶, 郦萍, 顾青, 韩佳润, authorCompany=null, correspAuthors=顾青, 韩佳润, authorNote=
作者贡献声明
殷家琪:方案设计、实验操作、初稿写作;王爽:样本采集、方案设计;刘嘉琦:协助实验操作、稿件修改;丁丽娜:方法论、数据收集和处理;邹静:软件程序,数据收集与监管;刘骏文:提供材料,协助实验操作;金瑶:协助实验操作;郦萍:论文润色修改;顾青:提供技术支持;韩佳润:研究构思和设计、监督指导、经费支持。
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1.浙江工商大学 食品与生物工程学院,全省食品微生物与营养健康重点实验室,浙江 杭州)])]), Author(id=1297571037269484142, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1297571037353370224, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, authorId=1297571037269484142, language=EN, stringName=Shuang WANG, firstName=Shuang, middleName=null, lastName=WANG, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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2.沈阳市妇婴医院,辽宁 沈阳, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=[AuthorCompany(id=1297571036917162597, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, xref=2., ext=[AuthorCompanyExt(id=1297571036925551206, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, companyId=1297571036917162597, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
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2.沈阳市妇婴医院,辽宁 沈阳)])]), Author(id=1297571037487587955, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, orderNo=2, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1297571037554696821, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, authorId=1297571037487587955, language=EN, stringName=Jiaqi LIU, firstName=Jiaqi, middleName=null, lastName=LIU, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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1.Zhejiang Key Laboratory of Food Microbiology and Nutritional Health, School of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou, Zhejiang, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null), CN=AuthorExt(id=1297571037621805686, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, authorId=1297571037487587955, language=CN, stringName=刘嘉琦, firstName=null, middleName=null, lastName=null, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=
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1.浙江工商大学 食品与生物工程学院,全省食品微生物与营养健康重点实验室,浙江 杭州)]), AuthorCompany(id=1297571036917162597, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, xref=2., ext=[AuthorCompanyExt(id=1297571036925551206, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, companyId=1297571036917162597, language=EN, country=null, province=null, city=null, postcode=null, companyName=null, departmentName=null, remark=
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2.沈阳市妇婴医院,辽宁 沈阳)])], figs=[ArticleFig(id=1297571040297771686, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 1, caption=
Flow chart of the study cohort. Based on gestational age at birth and feeding pattern, participants were divided into four groups: breastfeeding preterm infants (BPI) (29-36 weeks), non-breastfeeding preterm infants (NBPI) (29-36 weeks), breastfeeding full-term infants (BTI) (37-42 weeks), and non-breastfeeding full-term infants (NBTI) (37-42 weeks). Fresh fecal samples from newborns were collected for subsequent microbiome and metabolome analysis., figureFileSmall=g3rbYuxKTeO6k1cUiX5zQg==, figureFileBig=Qt+oIAgGSM53NJ396NrnjQ==, tableContent=null), ArticleFig(id=1297571040360686247, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图1, caption=
本研究队列流程图, figureFileSmall=g3rbYuxKTeO6k1cUiX5zQg==, figureFileBig=Qt+oIAgGSM53NJ396NrnjQ==, tableContent=null), ArticleFig(id=1297571040536847016, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 2, caption=
Inter-group comparison of gut microbiota diversity in infants. A-F: Represent the Venn diagram, beta diversity, ACE index, Chao1 index, Simpson index, and Shannon index, respectively. The significance marker is * (P<0.05)., figureFileSmall=OSvGCdTPK0HE3doraGra5w==, figureFileBig=sBx829pA212rSzfbMDxniw==, tableContent=null), ArticleFig(id=1297571040591372969, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图2, caption=
婴儿肠道微生物多样性的组间比较, figureFileSmall=OSvGCdTPK0HE3doraGra5w==, figureFileBig=sBx829pA212rSzfbMDxniw==, tableContent=null), ArticleFig(id=1297571040662676138, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 3, caption=
Inter-group comparison of infant gut microbiota structure. A: Composition of bacterial populations in fecal samples at the phylum level; B: Composition of bacterial populations in fecal samples at the genus level; C: Comparison of relative abundance of Bifidobacterium across four groups; D: Comparison of relative abundance of Lactobacillus across four groups; E: Comparison of relative abundance of Streptococcus across four groups; F: Comparison of relative abundance of Enterococcus across four groups. Non parametric tests were used for inter-group comparison of relative abundance at the same level, with significance marked as **P<0.01, ***P<0.001, ****P<0.000 5., figureFileSmall=W39rxrDtPquYlhJYqEvbJg==, figureFileBig=yIi8xM93nhI30rFbTGtLLw==, tableContent=null), ArticleFig(id=1297571040746562219, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图3, caption=
婴儿肠道微生物群落结构的组间比较, figureFileSmall=W39rxrDtPquYlhJYqEvbJg==, figureFileBig=yIi8xM93nhI30rFbTGtLLw==, tableContent=null), ArticleFig(id=1297571040834642604, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 4, caption=
Comparative analysis of significant differences in species within the intestinal microbial communities of infants. A: LEfSe phylogenetic tree [Different colors indicate taxa significantly enriched in the corresponding group (red: BPI; green: BTI; blue: NBTI), representing the taxonomic levels from phylum to species, from the inside out]; B: Bar graph of LDA effect sizes for LEfSe differential microbiota, showing the key taxa significantly enriched in each group and their discriminatory power (LDA>4.0, P<0.05)., figureFileSmall=wsm06x2rVR3TOZhe0P0bfg==, figureFileBig=FIe4yk9WLJpcACo52csqSA==, tableContent=null), ArticleFig(id=1297571040905945773, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图4, caption=
婴儿肠道微生物群落物种显著差异比较分析, figureFileSmall=wsm06x2rVR3TOZhe0P0bfg==, figureFileBig=FIe4yk9WLJpcACo52csqSA==, tableContent=null), ArticleFig(id=1297571040989831854, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 5, caption=
Metabolite pathways and classification annotations. A: KEGG pathway annotations; B: HMDB classification annotations; C: LIPID MAPS classification annotations., figureFileSmall=eRWnsUmMzvf/cKPcAfxdyA==, figureFileBig=xRp967QFAu2Rb2eDjSaGXQ==, tableContent=null), ArticleFig(id=1297571041052746415, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图5, caption=
代谢物通路及分类注释, figureFileSmall=eRWnsUmMzvf/cKPcAfxdyA==, figureFileBig=xRp967QFAu2Rb2eDjSaGXQ==, tableContent=null), ArticleFig(id=1297571041124049584, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 6, caption=
Metabolomics PLS-DA and permutation test plot. A, C, E, G: PLS-DA score plot; B, D, F, H: permutation test results., figureFileSmall=iseJhauNMk+qjFTwTHzl2Q==, figureFileBig=wbicUKYpZQKUGcBWazOTBg==, tableContent=null), ArticleFig(id=1297571041199547057, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图6, caption=
代谢组学PLS-DA与置换检验图, figureFileSmall=iseJhauNMk+qjFTwTHzl2Q==, figureFileBig=wbicUKYpZQKUGcBWazOTBg==, tableContent=null), ArticleFig(id=1297571041266655922, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 7, caption=
Differential metabolite volcano plots (A, C, E, G) and differential metabolite KEGG pathway enrichment bubble plots (B, D, F, H). The plots show the distribution of differential metabolites for NBPI vs. BPI, NBTI vs. BTI, BTI vs. BPI, and NBTI vs. NBPI, respectively., figureFileSmall=MjyeEfgoiN7HqimRAv6D2A==, figureFileBig=i6nNMkmQWVXxEw+rHz5wcg==, tableContent=null), ArticleFig(id=1297571041333764787, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图7, caption=
差异代谢物火山图(A、C、E、G)及差异代谢物KEGG通路富集气泡图(B、D、F、H), figureFileSmall=MjyeEfgoiN7HqimRAv6D2A==, figureFileBig=i6nNMkmQWVXxEw+rHz5wcg==, tableContent=null), ArticleFig(id=1297571041409262260, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 8, caption=
Differential metabolite matchstick plots. A: BPI vs. NBPI; B: BTI vs. NBTI; C: BTI vs. BPI; D: NBTI vs. NBPI. E-X: Bar graphs of key differential metabolites. In the matchstick plot, the color of the dots represents the up/down regulation, with blue indicating downregulation and red indicating upregulation; the length of the stick represents the magnitude of log2 fold change; and the size of the dot represents the magnitude of VIP value. The significance markers are *P<0.05, **P<0.01, ***P<0.001, ****P<0.000 5., figureFileSmall=9waOOE6SpDV7eLnevm/DkA==, figureFileBig=NTXDRCeDUCjEIvQ0l6tELg==, tableContent=null), ArticleFig(id=1297571041472176821, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图8, caption=
差异代谢物火柴杆图, figureFileSmall=9waOOE6SpDV7eLnevm/DkA==, figureFileBig=NTXDRCeDUCjEIvQ0l6tELg==, tableContent=null), ArticleFig(id=1297571041560257206, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Figure 9, caption=
Heatmaps of microbial-differential metabolite correlation analysis across different groups. A: BPI; B: NBPI; C: BTI; D: NBTI. The P-value was adjusted for FDR using the Benjamini-Hochberg method, and a correlation of *P<0.05 was considered significant., figureFileSmall=/JVSARhd3lGus5nXLeFjMQ==, figureFileBig=O6L2ry1RfLmRBwkmkkE9Gw==, tableContent=null), ArticleFig(id=1297571041635754679, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=图9, caption=
不同组别间微生物-差异代谢物相关性分析热图, figureFileSmall=/JVSARhd3lGus5nXLeFjMQ==, figureFileBig=O6L2ry1RfLmRBwkmkkE9Gw==, tableContent=null), ArticleFig(id=1297571041698669240, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=EN, label=Table 1, caption=
Mass spectrometry conditions
, figureFileSmall=null, figureFileBig=null, tableContent=
| Project | Parameters |
|---|
| Auxiliary airflow rate/psi | 13 |
| Sheath gas flow rate/psi | 50 |
| Capillary temperature/℃ | 325 |
| Auxiliary gas heating temperature/℃ | 425 |
| Positive mode ion spray voltage/V | 3 500 |
| Negative mode ion spray voltage/V | -3 500 |
| Normalized collision energy/V | Cyclic collision energy (20-40-60 V) |
| Primary MS resolution | 60 000 |
| Secondary MS resolution | 7 500 |
), ArticleFig(id=1297571041778361017, tenantId=1146029695717560320, journalId=1192105938417971205, articleId=1297571034408968781, language=CN, label=表1, caption=
质谱条件
, figureFileSmall=null, figureFileBig=null, tableContent=
| Project | Parameters |
|---|
| Auxiliary airflow rate/psi | 13 |
| Sheath gas flow rate/psi | 50 |
| Capillary temperature/℃ | 325 |
| Auxiliary gas heating temperature/℃ | 425 |
| Positive mode ion spray voltage/V | 3 500 |
| Negative mode ion spray voltage/V | -3 500 |
| Normalized collision energy/V | Cyclic collision energy (20-40-60 V) |
| Primary MS resolution | 60 000 |
| Secondary MS resolution | 7 500 |
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