Article(id=1242121667451879513, tenantId=1146029695717560320, journalId=1146031591421210625, issueId=1242121662611656759, articleNumber=null, orderNo=null, doi=10.3981/j.issn.1000-7857.2011.12.002, pmid=null, cstr=null, oa=null, hot=null, price=null, onlineType=0, articleFormat=0, articleType=null, articleTypeStr=null, receivedDate=1298390400000, receivedDateStr=2011-02-23, revisedDate=1301328000000, revisedDateStr=2011-03-29, acceptedDate=null, acceptedDateStr=null, onlineDate=1303401600000, onlineDateStr=2011-04-22, pubDate=1303401600000, pubDateStr=2011-04-22, doiRegisterDate=null, doiRegisterDateStr=null, onlineIssueDate=1303401600000, onlineIssueDateStr=2011-04-22, onlineJustAcceptDate=null, onlineJustAcceptDateStr=null, onlineFirstDate=null, onlineFirstDateStr=null, sourceXml=null, magXml=null, createTime=1774074483022, creator=sys-migrate, updateTime=1774074483022, updator=sys-migrate, issue=Issue{id=1242121662611656759, tenantId=1146029695717560320, journalId=1146031591421210625, year='2011', volume='29', issue='11-12', pageStart='3', pageEnd='93', issueExtLink='null', onlineDate='null', pubDate='1303401600000', pubDateStr='2011-04-22', beforeIssueId=null, nextIssueId=null, price=null, status=1, issueComplete=1, articleOrder=3, issueType=-1, specialIssue=null, createTime=1774074481866, creator='sys-migrate', updateTime=1774074481866, updator='sys-migrate', preIssue=null, nextIssue=null, articleTotal=null, ext=null, issueFiles=null, downloadFileDto=null}, startPage=23, endPage=31, ext={EN=ArticleExt(id=1242121672346632296, articleId=1242121667451879513, tenantId=1146029695717560320, journalId=1146031591421210625, language=EN, title=Clone of TaCAT Genes in Wheat (Triticum aestivum L.) and Its Biochemical and Molecular Biological Characterization, columnId=1242116080374710456, journalTitle=Science & Technology Review, columnName=Articles, runingTitle=null, highlight=null, articleAbstract=There is a close relationship between in vitro regeneration potential of wheat (Triticum aestivum L.) tissues and their resistant ability to oxidative stress. In order to dissect and provide theoretical evidences for subsequent experimental molecular functional characterization of TaCATs, e-PCR method and in silico techniques are employed for the isolation of the new member of wheat TaCAT family and the prediction on biochemical characters of TaCATs, respectively. TaCAT3, as a new member in wheat CAT gene family, is encoded a deduced 494-amino acid protein with the 1986bp and 1482bp of genomic DNA and cDNA, respectively, it shares 89% homology with CatA (Oryza sativa L.) and 81.1% identity with Cat3 (Zea mays L.), and is possibly targeted in the mitochondria according to the subcellular localization prediction. Furthermore, all the functional sites in TaCATs are highly conserved. Phylogenetic tree construction shows that the wheat TaCATs are able to form three separate branches with one isoform each. Swiss-PdbViewer 3.7 software package is employed for homology modeling of TaCATs after an appropriate template is acquired in Swiss Model online. The reconstructed model could well reflect the TaCAT senior structure., authors=null, authorsList=null, authorCompany=null, correspAuthors=null, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=CFwH/Ekv1ww4KAOMuFIEBg==, pdfFileSize=3507039, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1242121669859414089, articleId=1242121667451879513, tenantId=1146029695717560320, journalId=1146031591421210625, language=CN, title=小麦TaCAT新基因克隆及分子生物学和生化特性分析, columnId=1146540929516700224, journalTitle=科技导报, columnName=研究论文, runingTitle=null, highlight=null, articleAbstract=小麦组织培养再生潜力与抗氧化胁迫能力具有相关性。为解析小麦TaCATs基因家族的分子生物学及生化特性并为后续试验验证奠定理论基础,利用e-PCR方法进行小麦过氧化氢酶(CAT)新基因克隆,结合in silico技术对小麦TaCATs基因家族的生化特性进行分析和预测。氨基酸序列同源性比对结果表明,克隆的小麦TaCATs基因家族新成员与水稻的CatA和玉米的Cat3具有较高的相似性,分别达89%及81.1%,命名为TaCAT3,基因组DNA和cDNA长度分别为1986和1482bp,编码494个氨基酸的蛋白。亚细胞定位结果表明,TaCAT3可能定位在线粒体中,且所有的功能活性位点在小麦TaCATs家族中具有一致的保守性。系统发生树构建结果表明,小麦TaCATs能形成3个独立的分支。在蛋白质编码序列同源比对的基础上,利用SwissModel的Swiss-PdbViewer 3.7软件包对TaCATs高级结构进行同源模拟,发现所构建的模型能很好地反映TaCATs的高级结构。, authors=佘茂云,雷 昊,殷桂香,冯 晨,别晓敏,杜丽璞,徐惠君,叶兴国, authorsList=佘茂云;雷 昊;殷桂香;冯 晨;别晓敏;杜丽璞;徐惠君;叶兴国, authorCompany=中国农业科学院作物科学研究所;国家农作物基因资源与基因改良重大科学工程;农业部作物遗传育种重点开放实验室,北京 100081, correspAuthors=null, authorNote=null, correspAuthorsNote=佘茂云, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=cGCRFUttj9o+VhSktxnEZw==, pdfFileSize=3507039, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null)}, authors=null, keywords=[Keyword(id=1242121669481926725, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=CN, orderNo=1, keyword=小麦), Keyword(id=1242121669565812806, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=CN, orderNo=1, keyword=TaCAT), Keyword(id=1242121669645504583, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=CN, orderNo=1, keyword=in silico), Keyword(id=1242121669721002056, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=CN, orderNo=1, keyword=同源建模), Keyword(id=1242121671897845838, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=EN, orderNo=1, keyword=wheat), Keyword(id=1242121672006897743, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=EN, orderNo=1, keyword=TaCAT), Keyword(id=1242121672086589520, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=EN, orderNo=1, keyword=in silico), Keyword(id=1242121672166281297, tenantId=1146029695717560320, journalId=1146031591421210625, articleId=1242121667451879513, language=EN, orderNo=1, keyword=homology modeling)], refs=null, funds=null, companyList=null, figs=null, attaches=null, journal=Journal(id=1125356956822126595, delFlag=0, nameCn=科技导报, nameEn=Science & Technology Review, nameHistory1=null, nameHistory2=null, issn=1000-7857, eissn=, cn=11-1421/N, coden=null, periodic=3, language=CN, oaType=0, ccby=null, superviseOffice=null, ownerOffice=null, pubOffice=null, editorOffice=null, officeType=null, aims=null, clcCode=null, officeProv=null, officeCity=null, officeAddr=null, officeZip=null, officeEmail=null, officePhone=null, editDirector=null, officeDirector=null, officeDirectorPhone=null, officeStaffNum=null, officeEmpNum=null, coverPicUrl=wfghvu3bhh/dKxuZ+ucVHA==, journalPrice=null, startedYear=null, abbrevIsoEn=Sci Technol Rev, journalRemark=null, publicationField=null, createdTime=null, updatedTime=1774230116083, createdBy=null, updatedBy=13041195026, firstLetterCn=S, firstLetterEn=S, subjectCode=Natural Sciences, subjectName=自然科学, subjectCodeEn=Natural Sciences, subjectNameEn=null, picCn=wfghvu3bhh/dKxuZ+ucVHA==, picEn=yjSfclmpNm7ihn9NbTZ69g==, jcr=null, cjcr=null, exts=[JournalExt(id=1242774439910290156, language=CN, name=科技导报, nameHistory1=null, nameHistory2=null, managedBy=中国科学技术协会, sponsoredBy=中国科学技术协会, publishedBy=科技导报社, editorOffice=, officeProv=null, officeCity=null, officeAddr=, officeZip=, editDirector=, officeDirector=null, officePhone=null, coverPicUrl=null, journalRemark=, submitArticleUrl=null, websiteUrl=http://www.kjdb.org/CN/home, createdTime=1774230116107, updatedTime=1774230116107, createdBy=13041195026, updatedBy=13041195026, submissionGuidelinesUrl=http://www.kjdb.org/CN/column/column7.shtml, submissionAuthorUrl=https://kjdbauthor.cast.org.cn/webm, submissionEditorUrl=https://kjdbeditor.cast.org.cn/webm/, submissionReviewUrl=https://kjdbauthor.cast.org.cn/webm, submissionCeEditorUrl=https://kjdbeditor.cast.org.cn/webm/, submissionAeEditorUrl=https://kjdbeditor.cast.org.cn/webm/, option={"copyright":""}), JournalExt(id=1242774439960621805, language=EN, name=Science & Technology Review, nameHistory1=null, nameHistory2=null, managedBy=, sponsoredBy=, publishedBy=, editorOffice=, officeProv=null, officeCity=null, officeAddr=, officeZip=, editDirector=, officeDirector=null, officePhone=null, coverPicUrl=null, journalRemark=, submitArticleUrl=null, websiteUrl=http://www.kjdb.org/EN/home, createdTime=1774230116119, updatedTime=1774230116119, createdBy=13041195026, updatedBy=13041195026, submissionGuidelinesUrl=http://www.kjdb.org/EN/column/column7.shtml, submissionAuthorUrl=https://kjdbauthor.manuscriptcloud.com/login, submissionEditorUrl=https://kjdbeditor.manuscriptcloud.com/login, submissionReviewUrl=https://kjdbauthor.manuscriptcloud.com/login, submissionCeEditorUrl=https://kjdbeditor.manuscriptcloud.com/login, submissionAeEditorUrl=https://kjdbeditor.manuscriptcloud.com/login, option={"copyright":""})], databaseList=null, tenantJournalId=1146031591421210625, websiteList=[Website(id=1146104741081231361, webName=null, webTitle=null, webDomain=null, webCopyrigh=null, webIpcNo=null, seoTitle=null, seoKeywords=null, seoDescription=null, tenantJournalId=null, journalId=1146031591421210625, journalNameCn=null, journalNameEn=null, grayFlag=null, tenantId=1146029695717560320, platformId=null, journalGroupId=null, journalGroupNameCn=null, journalGroupNameEn=null, type=1, domain=https://castjournals.cast.org.cn/joweb/kjdb/CN, language=CN, createTime=1751182263881, createBy=18614031015, updateTime=1751778001962, updateBy=18614031015, name=科技导报, tplId=1146099689490845704, title=科技导报, delFlag=0, indexPage=/home, props=[WebsiteProps(id=1148021146403992296, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146104741081231361, code=articleTextType, value=kx, createTime=1751639170504, updateTime=1751639170504, creator=18614031015, updator=18614031015), WebsiteProps(id=1148021146378826469, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146104741081231361, code=banner, value=null, createTime=1751639170498, updateTime=1751639170498, creator=18614031015, updator=18614031015), WebsiteProps(id=1148021146366243556, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146104741081231361, code=logo, value=https://castjournals.cast.org.cn/joweb/kjdb/CN/file/pic?fileId=9GHSf7eGlIPH0Tv/OOdstA==, createTime=1751639170495, updateTime=1751639170495, creator=18614031015, updator=18614031015), WebsiteProps(id=1148021146395603687, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146104741081231361, code=picServerUrl, value=https://castjournals.cast.org.cn/joweb/kjdb/CN/file/pic, createTime=1751639170502, updateTime=1751639170502, creator=18614031015, updator=18614031015), WebsiteProps(id=1148021146387215078, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146104741081231361, code=staticResourcePath, value=https://castjournals.cast.org.cn/joweb/cast_kjdb_cn_619/, createTime=1751639170500, updateTime=1751639170500, creator=18614031015, updator=18614031015)]), Website(id=1146105254833139715, webName=null, webTitle=null, webDomain=null, webCopyrigh=null, webIpcNo=null, seoTitle=null, seoKeywords=null, seoDescription=null, tenantJournalId=null, journalId=1146031591421210625, journalNameCn=null, journalNameEn=null, grayFlag=null, tenantId=1146029695717560320, platformId=null, journalGroupId=null, journalGroupNameCn=null, journalGroupNameEn=null, type=1, domain=https://castjournals.cast.org.cn/joweb/kjdb/EN, language=EN, createTime=1751182386363, createBy=18614031015, updateTime=1753500121937, updateBy=18614031015, name=科技导报, tplId=1146101810881728533, title=Science & Technology Review, delFlag=0, indexPage=/home, props=[WebsiteProps(id=1155838567709528217, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146105254833139715, code=articleTextType, value=kx, createTime=1753502988984, updateTime=1753502988984, creator=18614031015, updator=18614031015), WebsiteProps(id=1155838567692750998, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146105254833139715, code=banner, value=null, createTime=1753502988980, updateTime=1753502988980, creator=18614031015, updator=18614031015), WebsiteProps(id=1155838567688556693, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146105254833139715, code=logo, value=https://castjournals.cast.org.cn/joweb/kjdb/EN/file/pic?fileId=9GHSf7eGlIPH0Tv/OOdstA==, createTime=1753502988979, updateTime=1753502988979, creator=18614031015, updator=18614031015), WebsiteProps(id=1155838567705333912, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146105254833139715, code=picServerUrl, value=https://castjournals.cast.org.cn/joweb/kjdb/EN/file/pic, createTime=1753502988983, updateTime=1753502988983, creator=18614031015, updator=18614031015), WebsiteProps(id=1155838567701139607, tenantId=1146029695717560320, journalId=null, journalGroupId=null, siteId=1146105254833139715, code=staticResourcePath, value=https://castjournals.cast.org.cn/joweb/cast_kjdb_en_623/, createTime=1753502988982, updateTime=1753502988982, creator=18614031015, updator=18614031015)])], journalTitle=科技导报, weixinUrl=null, journalUrl=null, iacademicId=null, status=1, seqNo=null, journalTitleEn=Science & Technology Review, journalPhotoCn=wfghvu3bhh/dKxuZ+ucVHA==, journalPhotoEn=yjSfclmpNm7ihn9NbTZ69g==, journalFirstLetter=S, journalRecommend=null, journalNew=null, journalCollection=1, jcrJf=null, cjcrJf=0.91, jcrJfStr=null, cjcrJfStr=null, submissionFirstDecision=null, sciSubjectClassification=null, casSubjectClassification=null, citeScore=null, totalCitationFrequency=null, icpCode=null, psCode=null, advertisingLicenseCode=null, copyrightInformation=null, country=null, option=, provinceCode=null, provinceName=null, collectFlag=false, interPubPlatform=null, interPubPlatformUrl=null), detailUrlCn=https://castjournals.cast.org.cn/joweb/kjdb/CN/10.3981/j.issn.1000-7857.2011.12.002, detailUrlEn=https://castjournals.cast.org.cn/joweb/kjdb/EN/10.3981/j.issn.1000-7857.2011.12.002, pdfUrlCn=https://castjournals.cast.org.cn/joweb/kjdb/CN/PDF/10.3981/j.issn.1000-7857.2011.12.002, pdfUrlEn=https://castjournals.cast.org.cn/joweb/kjdb/EN/PDF/10.3981/j.issn.1000-7857.2011.12.002, aliStartDate=null, aliEndDate=null, collectionFlag=false, citedCount=null, citedUrl=null, previewStatus=0, delFlag=0, hasFullText=0, orderTime=1303401600000, fullTextJson=null, articleText=null, reference=null)
收藏切换
小麦TaCAT新基因克隆及分子生物学和生化特性分析
收藏切换
PDF下载
科技导报 | 研究论文 2011,29(11-12): 23-31
收起
收藏切换
科技导报 | 研究论文 2011, 29(11-12): 23-31
小麦TaCAT新基因克隆及分子生物学和生化特性分析
全屏
佘茂云,雷 昊,殷桂香,冯 晨,别晓敏,杜丽璞,徐惠君,叶兴国
作者信息
    中国农业科学院作物科学研究所;国家农作物基因资源与基因改良重大科学工程;农业部作物遗传育种重点开放实验室,北京 100081

通讯作者:

佘茂云
Clone of TaCAT Genes in Wheat (Triticum aestivum L.) and Its Biochemical and Molecular Biological Characterization
Affiliations
出版时间: 2011-04-22 doi: 10.3981/j.issn.1000-7857.2011.12.002
文章导航
收藏切换
小麦组织培养再生潜力与抗氧化胁迫能力具有相关性。为解析小麦TaCATs基因家族的分子生物学及生化特性并为后续试验验证奠定理论基础,利用e-PCR方法进行小麦过氧化氢酶(CAT)新基因克隆,结合in silico技术对小麦TaCATs基因家族的生化特性进行分析和预测。氨基酸序列同源性比对结果表明,克隆的小麦TaCATs基因家族新成员与水稻的CatA和玉米的Cat3具有较高的相似性,分别达89%及81.1%,命名为TaCAT3,基因组DNA和cDNA长度分别为1986和1482bp,编码494个氨基酸的蛋白。亚细胞定位结果表明,TaCAT3可能定位在线粒体中,且所有的功能活性位点在小麦TaCATs家族中具有一致的保守性。系统发生树构建结果表明,小麦TaCATs能形成3个独立的分支。在蛋白质编码序列同源比对的基础上,利用SwissModel的Swiss-PdbViewer 3.7软件包对TaCATs高级结构进行同源模拟,发现所构建的模型能很好地反映TaCATs的高级结构。
小麦  /  TaCAT  /  in silico  /  同源建模
There is a close relationship between in vitro regeneration potential of wheat (Triticum aestivum L.) tissues and their resistant ability to oxidative stress. In order to dissect and provide theoretical evidences for subsequent experimental molecular functional characterization of TaCATs, e-PCR method and in silico techniques are employed for the isolation of the new member of wheat TaCAT family and the prediction on biochemical characters of TaCATs, respectively. TaCAT3, as a new member in wheat CAT gene family, is encoded a deduced 494-amino acid protein with the 1986bp and 1482bp of genomic DNA and cDNA, respectively, it shares 89% homology with CatA (Oryza sativa L.) and 81.1% identity with Cat3 (Zea mays L.), and is possibly targeted in the mitochondria according to the subcellular localization prediction. Furthermore, all the functional sites in TaCATs are highly conserved. Phylogenetic tree construction shows that the wheat TaCATs are able to form three separate branches with one isoform each. Swiss-PdbViewer 3.7 software package is employed for homology modeling of TaCATs after an appropriate template is acquired in Swiss Model online. The reconstructed model could well reflect the TaCAT senior structure.
wheat  /  TaCAT  /  in silico  /  homology modeling
佘茂云;雷 昊;殷桂香;冯 晨;别晓敏;杜丽璞;徐惠君;叶兴国. 小麦TaCAT新基因克隆及分子生物学和生化特性分析. 科技导报, 2011 , 29 (11-12) : 23 -31 . DOI: 10.3981/j.issn.1000-7857.2011.12.002
. Clone of TaCAT Genes in Wheat (Triticum aestivum L.) and Its Biochemical and Molecular Biological Characterization[J]. Science & Technology Review, 2011 , 29 (11-12) : 23 -31 . DOI: 10.3981/j.issn.1000-7857.2011.12.002
2011年第29卷第11-12期
PDF下载
264
101
引用本文
BibTeX
文章信息
doi: 10.3981/j.issn.1000-7857.2011.12.002
  • 接收时间:2011-02-23
  • 首发时间:2011-04-22
  • 出版时间:2011-04-22
补充材料
相关文章
文章信息
作者
出版历史
  • 收稿日期:2011-02-23
  • 修回日期:2011-03-29
基金
作者信息

通讯作者:

佘茂云
参考文献
分享链接
https://castjournals.cast.org.cn/joweb/kjdb/CN/10.3981/j.issn.1000-7857.2011.12.002
分享至
全文二维码

扫描看全文

引用本文
BibTeX
本文的引用情况
2种不同金属材料的力学参数

Family
属数
Number of
genus
种数
Number of
species
占总种数比例
Percentage of
total species (%)

Genus
种数
Number of
species
占总种数比例
Percentage of total
species (%)
鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78
小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39
多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39
红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87
小菇属 Mycena 11 5.26
光柄菇属 Pluteus 5 2.39
红菇属 Russula 17 8.13
栓菌属 Trametes 5 2.39
关闭全屏