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科技导报
|研究论文
2007
, 25
(0712) :
23
-27
多鳍鱼Shh基因克隆与同源性分析
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张昌盛1,2,刘群1,刘湘涛2,翟红2,王俊杰2,孙永华2
作者信息
1中国农业大学动物医学院 北京
2北京自然博物馆 北京
Cloning and Polymorphistic Analysis of Shh Gene from Senegal Bichir
Affiliations
出版时间: 2007-06-25
文章导航
根据已报道的软骨鱼、硬骨鱼、两栖类、鸟类、哺乳类和人的Sonic hedgehog (Shh)基因序列,在Shh基因保守区设计一对简并性引物,利用PCR技术从多鳍鱼cDNA中扩增Shh基因。结果显示,多鳍鱼Shh基因全长1 263bp,编码421个氨基酸。通过同源性比较发现,多鳍鱼与肺鱼的同源性最高,为82.5%,二级结构分析表明,Shh蛋白含有30.71%的α螺旋,21.67%的扩展线条和47.62%的无规卷曲,不含β片层;并以蛋白质结构数据库(PDB)中已解析的Shh蛋白的三维结晶结构(3D)为模板,利用http://www.expasy.org/swissmod/SWISS-MODEL.html同源模建Shh蛋白的三维结构,为进一步研究Shh基因在胚胎体节发育和肢芽图式形成中的功能奠定了基础。
多鳍鱼
/
Shh基因
/
分子进化
/
同源性分析
A pair of degenerated primers was designed according to the reported Shh gene order of elasmobranch, teleost, amphibians, avifauna, mammalia and human, to amplify the Shh gene from Senegal bichir cDNA by PCR. The result shows that the Senegal bichir Shh gene is of 1 263 bp in length,with 421 amino acids. From a comparison by homology, it can be seen that lungfish and Senegal bichir share the highest homology of 82.5%. A secondary structure analysis shows Shh albumen consists of 30.71% of α helix, 21.67% of extended line and 47.62% of random coil, without β slice. To construct the three dimensional structure of Shh protein by homology using http://www.expasy.org/swissmod/SWISS-MODEL.html one establishes a good foundation for further studies on Shh gene functions in the embryonic development and the limb bud schema.
张昌盛;刘群;刘湘涛;翟红;王俊杰;孙永华.
多鳍鱼Shh基因克隆与同源性分析.
科技导报,
2007
, 25
(0712)
: 23
-27
.
.
Cloning and Polymorphistic Analysis of Shh Gene from Senegal Bichir[J].
Science & Technology Review ,
2007
, 25
(0712)
: 23
-27
.
2007年第25卷第0712期
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接收时间:2008-08-20
首发时间:2007-06-25
出版时间:2007-06-25
收稿日期:2008-08-20
修回日期:1900-01-01
https://castjournals.cast.org.cn/joweb/kjdb/CN/1242118433547031042
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2种不同金属材料的力学参数
科 Family 属数 Number of genus 种数 Number of species 占总种数比例 Percentage of total species (%) 属 Genus 种数 Number of species 占总种数比例 Percentage of total species (%) 鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78 小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39 多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39 红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87 小菇属 Mycena 11 5.26 光柄菇属 Pluteus 5 2.39 红菇属 Russula 17 8.13 栓菌属 Trametes 5 2.39
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