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2. Basic Medical College, Xinjiang Medical University, Urumqi 830011, China;
3. State Key Laboratory Incubation Base of Xinjiang Major Diseases Research, the First Affiliated Hospital of Xinjiang Medical University, Urumqi 830011, China, correspAuthors=null, authorNote=null, correspAuthorsNote=null, copyrightStatement=null, copyrightOwner=null, extLink=null, articleAbsUrl=null, sourceXml=null, magXml=null, pdfUrl=null, pdf=WBQW+Oif1M2qD2zTCOwx6A==, pdfFileSize=5247468, pdfExtLink=null, richHtmlUrl=null, mobilePdfUrl=null, reviewReport=null, pdfFirstPage=null, abstractGraph=null, abstractGraphContent=null, abstractVideo=null, citation=null, cebUrl=null, magXmlContent=null, mapNumber=null, fund=null), CN=ArticleExt(id=1242134490479403972, articleId=1242134487262376917, tenantId=1146029695717560320, journalId=1146031591421210625, language=CN, title=细粒棘球绦虫新疆株胆汁酸钠协同转运蛋白基因的克隆及序列分析, columnId=1242116809164390686, journalTitle=科技导报, columnName=综述文章, runingTitle=null, highlight=null, articleAbstract=从新疆株细粒棘球绦虫(Echinococcus granulosus ,Eg)原头蚴中克隆胆汁酸钠协同转运蛋白(sodium-bile acid co-transporter,EgSBACT )基因,进行序列测定和生物信息学分析。首先设计EgSBACT 基因特异性引物,用RT 及PCR 方法从新疆株细粒棘球绦虫原头蚴提取总RNA,将其反转录成cDNA 后扩增EgSBACT 基因并将其克隆至原核表达载体pET30a 中,测序鉴定序列并进行生物信息学分析。结果显示,RT-PCR 扩增出一长度约650 bp 的基因,测序显示其长度为654 bp,序列与Gen-bank 公布的EUB59978.1 完全一致,其编码217 个氨基酸,预测其等电点为9.28。同源性分析发现,EgSBACT 蛋白序列与中华枝睾吸虫SBACT(GenBank:GAA57409.1)同源性最高,达到43%。进化树分析表明,细粒棘球绦虫的SBACT 蛋白与吸虫纲的SBACT 相聚集,在进化树上处于一枝,而与其他物种亲缘性较远。由此表明,本研究成功克隆出细粒棘球绦虫EgSBACT 基因。, authors=杨梅1,2 , 梁小弟2 , 李军3 , 李亮3 , 张富春1 , 张文宝3 , authorsList=杨梅, 梁小弟, 李军, 李亮, 张富春, 张文宝, authorCompany=1. 新疆大学生命科学与技术学院, 新疆生物资源基因工程重点实验室, 乌鲁木齐 830046;
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科技导报
| 综述文章 2016, 34(2): 215-220
细粒棘球绦虫新疆株胆汁酸钠协同转运蛋白基因的克隆及序列分析
全屏
杨梅, 梁小弟, 李军, 李亮, 张富春, 张文宝
作者信息
通讯作者:
张文宝,研究员,研究方向为包虫病的防控,电子信箱:wenbaozhang2013@163.com;张富春(共同通信作者),教授,研究方向为包虫病的防控,电子信箱:zfcxju@xju.edu.cn
Molecular cloning and sequence analysis of sodium-bile acid cotransporter from Echinococcus granulosus in Xinjiang, China
YANG Mei, LIANG Xiaodi, LI Jun, LI Liang, ZHANG Fuchun, ZHANG Wenbao
Affiliations
出版时间: 2016-01-28
doi: 10.3981/j.issn.1000-7857.2016.2.036
文章导航
从新疆株细粒棘球绦虫(Echinococcus granulosus ,Eg)原头蚴中克隆胆汁酸钠协同转运蛋白(sodium-bile acid co-transporter,EgSBACT )基因,进行序列测定和生物信息学分析。首先设计EgSBACT 基因特异性引物,用RT 及PCR 方法从新疆株细粒棘球绦虫原头蚴提取总RNA,将其反转录成cDNA 后扩增EgSBACT 基因并将其克隆至原核表达载体pET30a 中,测序鉴定序列并进行生物信息学分析。结果显示,RT-PCR 扩增出一长度约650 bp 的基因,测序显示其长度为654 bp,序列与Gen-bank 公布的EUB59978.1 完全一致,其编码217 个氨基酸,预测其等电点为9.28。同源性分析发现,EgSBACT 蛋白序列与中华枝睾吸虫SBACT(GenBank:GAA57409.1)同源性最高,达到43%。进化树分析表明,细粒棘球绦虫的SBACT 蛋白与吸虫纲的SBACT 相聚集,在进化树上处于一枝,而与其他物种亲缘性较远。由此表明,本研究成功克隆出细粒棘球绦虫EgSBACT 基因。
Sodium-bile acid cotransporter (EgSBACT ) functions in the sodium-bile acid transportation in Echinococcus granulosus (Eg) Protoscolex and the sequence is unknown. The specific primers for EgSBACT mRNA are designed and the EgSBACT gene is amplified by RT-PCR from Eg protoscolex total RNA. Then the EgSBACT gene fragment is cloned into pET30a vector which is a prokaryotic expression vector for sequencing and analyzing by bioinformatics method. The PCR products of EgSBACT is about 650 bp whose length is 654 bp and encodes a protein containing 217 amino acids and the pI of this protein is predicted as 9.28. Homology analysis shows that there is 43% of similarity between EgSBACT and the trematode SBACT (GenBank: GAA57409.1). Phylogenetic analysis shows that EgSBACT is clustered with Fluke, and has a lower homology to other species. EgSBACT gene is cloned from protoscolex of Echinococcus granulosus in Xinjiang, which lays a foundation for further study of EgSBACT function in the development and differentiation of PSCs into adult worms. This research provides a way to express the EgSBACT protein in vitro and taking advantage of this protein further research can reveal the exact functions of EgSBACT in the sodium-bile acid transportation in Echinococcus granulosus .
Echinococcus granulosus
/
EgSBACT
/
sequence analysis
杨梅, 梁小弟, 李军, 李亮, 张富春, 张文宝.
细粒棘球绦虫新疆株胆汁酸钠协同转运蛋白基因的克隆及序列分析.
科技导报,
2016
, 34
(2)
: 215
-220
.
DOI: 10.3981/j.issn.1000-7857.2016.2.036
YANG Mei, LIANG Xiaodi, LI Jun, LI Liang, ZHANG Fuchun, ZHANG Wenbao.
Molecular cloning and sequence analysis of sodium-bile acid cotransporter from Echinococcus granulosus in Xinjiang, China[J].
Science & Technology Review ,
2016
, 34
(2)
: 215
-220
.
DOI: 10.3981/j.issn.1000-7857.2016.2.036
2016年第34卷第2期
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引用本文
BibTeX
文章信息
doi: 10.3981/j.issn.1000-7857.2016.2.036
接收时间:2015-04-13
首发时间:2016-02-04
出版时间:2016-01-28
收稿日期:2015-04-13
修回日期:2015-06-16
通讯作者:
张文宝,研究员,研究方向为包虫病的防控,电子信箱:wenbaozhang2013@163.com;张富春(共同通信作者),教授,研究方向为包虫病的防控,电子信箱:zfcxju@xju.edu.cn
https://castjournals.cast.org.cn/joweb/kjdb/CN/10.3981/j.issn.1000-7857.2016.2.036
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2种不同金属材料的力学参数
科 Family 属数 Number of genus 种数 Number of species 占总种数比例 Percentage of total species (%) 属 Genus 种数 Number of species 占总种数比例 Percentage of total species (%) 鹅膏菌科Amanitaceae 2 11 5.26 鹅膏菌属 Amanita 10 4.78 小菇科 Mycenaceae 2 12 5.74 丝盖伞属 Inocybe 5 2.39 多孔菌科 Polyporaceae 8 14 6.70 蜡蘑属 Laccaria 5 2.39 红菇科 Russulaceae 3 23 11.00 小皮伞属 Marasmius 6 2.87 小菇属 Mycena 11 5.26 光柄菇属 Pluteus 5 2.39 红菇属 Russula 17 8.13 栓菌属 Trametes 5 2.39
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